1. Browse the Database
  2. View Redoxidase
Entry information : BdiPrx34(Bradi1g57247)
Entry ID 7988
Creation 2011-02-08 (Toky Ramarohetra)
Last sequence changes 2011-02-08 (Toky Ramarohetra)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2023-03-14 (Christophe Dunand)
Peroxidase information: BdiPrx34(Bradi1g57247)
Name BdiPrx34(Bradi1g57247)
Class Class III peroxidase    [Orthogroup: Prx136]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx34
start..stop		 S start..stop
TaPrx33-1A 485 8.5e-175 25..319 26..320
TaPrx33-1D 484 3.49e-174 25..319 26..320
TaPrx33-1B 476 7.53e-171 25..319 22..330
SiPrx157 463 7.6e-166 24..319 32..330
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7988' 'join(55976368..55976574,55976668..55976862,55977199..55977364,55978347..55978738)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 55976368..55976574 205 N° 2 55976668..55976862 193 N° 3 55977199..55977364 164 N° 4 55978347..55978738 390
join(55976368..55976574,55976668..55976862,55977199..55977364,55978347..55978738 )


exon

Literature and cross-references BdiPrx34(Bradi1g57247)
DNA ref. Phytozome 12:   Bd1 (55976368..55978738)
Protein sequence: BdiPrx34(Bradi1g57247)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   319 (295)
PWM (Da):   %s   33184.23 (30789.0)  
PI (pH):   %s   4.56 (4.36) Peptide Signal:   %s   cut: 25 range:25-319
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASKHGWIACVLFLVAAAAAKANAQLSEDYYDASCPAALLTIRAA
VATAVLLNRRMGASLLRLHFHDCFGCDASVLLDDTDDGFTGEKGAGPNAGSLLGFEVIDRIKMLLELMCPRTVSCADILAVAARDSVVSLGGPSWTVLLGRRDATTASASLANSDLPGPTSNLNNLLSAFSKKGLSSTDMVALSGAHTIGRAQCKNYQDRIYNDTDIDGPFAASLRADCPQAAGGNDGSLAPLDVSSPDAFDNSYFSGLLYRQGLLHSDQALYDGGSTDELVKSYASDGDRFGCDFAAAMVNMGNISPLTGADG
EIRVNCRAVN

Retrieve as FASTA  
Remarks Complete sequence from gwnomic (chromo, 3 introns). Incomplete prediction from ensembl (FHDC is missing). No prediction from phytozome
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCAAAGCACGGTTGGATCGCTTGTGTACTGTTTCTCGTCGCAGCTGCGGCAGCCAAAGCCAATGCACAGCTCTCAGAGGACTACTACGACGCTTCCTGCCCCGCGGCGCTACTC
ACCATCAGGGCTGCCGTGGCAACGGCGGTGCTGCTCAACCGCCGCATGGGCGCCTCCCTCCTCCGGCTTCACTTCCACGACTGCTTCTCGTGCAAGCAAGTCTCCTTAATTTTTCTCTCT
TCCTCTGTTAATTTACACTGATCGGGTCTTCGATCAGTAATATGGACATCTAATGGTGGCAGGGCTGCGATGCTTCCGTGCTCCTCGACGACACAGACGACGGATTCACCGGCGAGAAAG
GGGCTGGGCCGAACGCCGGGTCGCTGCTGGGTTTCGAGGTGATCGACAGGATCAAGATGCTGCTGGAGCTCATGTGTCCGCGTACCGTCTCCTGTGCCGACATCCTCGCCGTCGCCGCCC
GGGACTCCGTCGTCAGTGTGTAAGCTAGTTAAGCTCGCGCTAGAGCACTGAATTCAAGCTCGCTAGAGCACCGAATGTGTCCACGGACTATAGGTCACGGTATATGACCGGACGCATTTC
AAAGTGCGTCAAATTTATATTCGTGGCATTTTAAAAGTGTGAATATACTCGTGTTGGCAAAAGTATTTGACGTTTTTTTTTTGACAGAATCTGCGGTTGAAGTGCTAAAACTGCGGTTAA
AATCAAAATTAACTACGTTTGAACAAAGTGCAGCTAACATAGTGCCGATCGATCATTTCGTCGGCGGAATTTAATTTAATTAGTACTATACCATTTTTGTTGGACTTTTTTTCAGCTAGG
GGGCCCTTCATGGACGGTTCTACTTGGGAGGAGGGATGCCACCACAGCAAGTGCGTCCTTGGCCAACAGTGACCTCCCCGGCCCGACCTCCAACCTCAACAATCTCCTCAGCGCCTTCTC
CAAAAAGGGACTCAGCAGCACCGATATGGTTGCTCTCTCAGAGGTAGAGTATTTTTTTCGAGGAGGAGGAAACCCGTTGGACTCTGCATCAACAGTCATGTATCACGGCCAACAAACTTT
AAACTATCGCCACCAAAGAAATTAACTTCAAAGTATCTAACGAACGAGCAACTTTGTAGAGGTAAACGATGATCAATCTAGTGCAGGCAGTACATCTATGTCGTCCTCTAGTGCGTATAT
ATGCATATTATTGCATGCAGGCACCATCCAAAGTGCCTATGCGCGTATATGTGTGTAGGCTTTTTAGTGCCATTACGACTCTTTTTTCACAAGTTCTTGGCAACTTCTTTCCGTTCACCT
AATGATCGTCATCGTCCCAGTGATTCATCCAGGGTGCATGTGCATCCAGTATAGCTCTTGTCTCTATTCTCGGCTCACAGTACCTTTCCTTTTCGCAACCAGACAAGGCACATGCATGCA
TTCACGAGACATCAAGTACCTGATCACTCGAGTGGTCAAAATGTGCCACCCAACCACCCCCTATATATTCAGTGACCCCATATGCATGCAACATGCAATGTTTCTGAGACAAAACAAAAG
AAGAAATATGCCGTGCAAATCGTTCATGCATGCTTGCATGTTACTCTATCGACCAATCAAAAGACCCCAAGAAAGCAAAATGCGAGAGCGACGTTTCGATCAATATAGTAGATCAAAAGC
TCCCAAAAAACAATAGGTTGCACCAAATGATTATATTTTGAAAAACTTGAGCCCATGATTTTGTTTAAAAATGTAATATAAAGAAATCCTTAAATTCTACAGAACTTTTGTGATATATAG
ACCATATAACTAGATAAGTAAATCTGCCAATGTAACGTATTGTTTTTCTAGTGTAGGTTAGTAGACTATTCCAAAATGCGAAACCTCATATATTTCGATCAATATAATAGATCAAAAGCT
CCCAAGGAAAATCACCGCATTATTCTTGCTGCCTCGCCGGCCATGTGAAATGTACATCTCTGCAGGAGCCCACACCATAGGCCGCGCGCAGTGCAAGAACTACCAGGACAGGATCTACAA
CGACACCGACATCGACGGCCCGTTTGCGGCGTCGCTGCGTGCCGACTGCCCCCAGGCCGCAGGCGGCAACGATGGCAGCCTCGCGCCGCTTGATGTGTCCTCGCCTGACGCCTTCGACAA
CAGCTACTTCTCCGGCCTCCTCTACCGCCAGGGGCTGTTGCACTCCGACCAGGCGTTGTACGACGGCGGCTCCACTGACGAACTGGTCAAGAGCTACGCGTCCGATGGTGATCGGTTTGG
CTGCGACTTCGCGGCGGCAATGGTGAACATGGGCAATATCAGCCCGCTCACAGGGGCGGATGGCGAGATCAGGGTGAACTGCAGGGCGGTGAATTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCAAAGCACGGTTGGATCGCTTGTGTACTGTTTCTCGTCGCAGCTGCGGCAGCCAAAGCCAATGCACAGCTCTCAGAGGACTACTACGACGCTTCCTGCCCCGCGGCGCTACTC
ACCATCAGGGCTGCCGTGGCAACGGCGGTGCTGCTCAACCGCCGCATGGGCGCCTCCCTCCTCCGGCTTCACTTCCACGACTGCTTCGGCTGCGATGCTTCCGTGCTCCTCGACGACACA
GACGACGGATTCACCGGCGAGAAAGGGGCTGGGCCGAACGCCGGGTCGCTGCTGGGTTTCGAGGTGATCGACAGGATCAAGATGCTGCTGGAGCTCATGTGTCCGCGTACCGTCTCCTGT
GCCGACATCCTCGCCGTCGCCGCCCGGGACTCCGTCGTCAGTCTAGGGGGCCCTTCATGGACGGTTCTACTTGGGAGGAGGGATGCCACCACAGCAAGTGCGTCCTTGGCCAACAGTGAC
CTCCCCGGCCCGACCTCCAACCTCAACAATCTCCTCAGCGCCTTCTCCAAAAAGGGACTCAGCAGCACCGATATGGTTGCTCTCTCAGGAGCCCACACCATAGGCCGCGCGCAGTGCAAG
AACTACCAGGACAGGATCTACAACGACACCGACATCGACGGCCCGTTTGCGGCGTCGCTGCGTGCCGACTGCCCCCAGGCCGCAGGCGGCAACGATGGCAGCCTCGCGCCGCTTGATGTG
TCCTCGCCTGACGCCTTCGACAACAGCTACTTCTCCGGCCTCCTCTACCGCCAGGGGCTGTTGCACTCCGACCAGGCGTTGTACGACGGCGGCTCCACTGACGAACTGGTCAAGAGCTAC
GCGTCCGATGGTGATCGGTTTGGCTGCGACTTCGCGGCGGCAATGGTGAACATGGGCAATATCAGCCCGCTCACAGGGGCGGATGGCGAGATCAGGGTGAACTGCAGGGCGGTGAATTAA

Retrieve as FASTA