View Redoxidase 8000

Entry information : ZmAPx[P]01(Zm00001d006056 / GRMZM2G150356 [6a])

Entry ID	8000
Creation	2011-02-18 (Christophe Dunand)
Last sequence changes	2011-02-18 (Christophe Dunand)
Sequence status	theoretical translation / pseudogene
Reviewer	Not yet reviewed
Last annotation changes	2022-12-30 (Christophe Dunand)

Peroxidase information: ZmAPx[P]01(Zm00001d006056 / GRMZM2G150356 [6a])

Name

ZmAPx[P]01(Zm00001d006056 / GRMZM2G150356 [6a])

Class

Ascorbate peroxidase [Orthogroup: APx001]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea

Organism

Zea mays [TaxId: 4577 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	ZmAPx[P]01 start..stop	S start..stop
ZmAPx[P]02	259	1.17e-91	1..127	1..127
ZmAPx[P]06	258	4.23e-91	1..127	1..127
ZmAPx[P]05	258	4.23e-91	1..127	1..127
ZmAPx[P]04	258	4.23e-91	1..127	1..127

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8000' 'join(190998892..190998943,190999186..190999271,190999355..190999434,190999590..190999692,190999769..190999828)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	190998892..190998943	50	N° 2	190999186..190999271	84	N° 3	190999355..190999434	78	N° 4	190999590..190999692	101
N° 5	190999769..190999828	58
join(190998892..190998943,190999186..190999271,190999355..190999434,190999590..1 90999692,190999769..190999828)

Literature and cross-references ZmAPx[P]01(Zm00001d006056 / GRMZM2G150356 [6a])

Protein sequence: ZmAPx[P]01(Zm00001d006056 / GRMZM2G150356 [6a])

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	127
PWM (Da):	14020.09
PI (pH):	5.22

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

QDKPQPPPEGRLPDATKGSDHLRQVFGKQMGLSDQDIVALSGGHTGRCHKERSGFEGAWTTNPLVFDNSYFKELLSGDKEGLLQLPSDKALLSDPVFRPLVEKYADEKAFFDDYKEAHLK
LSELG

Retrieve as FASTA

Remarks

Pseudogene (chromo 2). Large 5' part and last exon are missing. Incorrect prediction from Phytozome

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

CAGGACAAGCCTCAGCCGCCACCTGAGGGCCGTCTTCCTGATGCCACCAAGGGGGTAGATTTCTAATCTTTACTAGATTGGCATGAATGCTGAGTTAATGGGTTACATTCACCTTGCATC
CTTTGTTAAGTGTTTCAAAGGTGTTGTTTTGGCATCCCTGTACCCAGCTTGCTTTGGGTAACAGTGGTGCCTTGTAGCCGAGGCACCGTGTAGGCGTCCAGACCAAACACTGGTTTTGAT
GTCACTTCTATTGACACGAGGACTGGCACTTGCTGCTTGCTTTTTTTTGAAACCAGGTTCTGACCACCTGAGGCAAGTCTTTGGCAAGCAGATGGGTTTGAGTGATCAGGACATCGTTGC
CCTCTCTGGTGGCCACACCTTGTGGTTTGTTGTTGTCCACTCATGTTTGATTCAGGAATGTAATGTTTATGCCTGTACTGATTTAGTTTTCTTTGAGGTTTTATTAGGGAAGGTGCCACA
AAGAGCGGTCTGGTTTTGAGGGGGCCTGGACTACGAACCCTTTGGTCTTTGACAACTCTTACTTCAAAAGTGAGTCTGTCTTGTTTACTATTGAAAAGCAACTGCATTTAGTTAAGAAAT
ACTTAAAATTTGTTTACCTTTGTTATGTCATTACTGGGCAGCTGAATGCTGTGCTAGAAATTAATAGTCGTCCCATATCTCCTACTATTCCCATATTTTCATAGGGAACTTCTGAGTGGT
GACAAGGAGGGCCTTCTTCAGCTCCCAAGTGACAAAGCCCTGCTGAGCGACCCTGTCTTCCGCCCTCTTGTGGAGAAATATGCTGCACAGTATGTCCTTGGTCATTGTTATCCAGGGTAT
GGAGATTCGTAGGGAGGCAAGTACTGATTATCGTGTGCTTTGTAGGATGAGAAGGCATTCTTTGATGACTACAAAGAGGCCCACCTCAAGCTCTCCGAACTGGGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

CAGGACAAGCCTCAGCCGCCACCTGAGGGCCGTCTTCCTGATGCCACCAAGGGTTCTGACCACCTGAGGCAAGTCTTTGGCAAGCAGATGGGTTTGAGTGATCAGGACATCGTTGCCCTC
TCTGGTGGCCACACCTTGGGAAGGTGCCACAAAGAGCGGTCTGGTTTTGAGGGGGCCTGGACTACGAACCCTTTGGTCTTTGACAACTCTTACTTCAAGGAACTTCTGAGTGGTGACAAG
GAGGGCCTTCTTCAGCTCCCAAGTGACAAAGCCCTGCTGAGCGACCCTGTCTTCCGCCCTCTTGTGGAGAAATATGCTGCAGATGAGAAGGCATTCTTTGATGACTACAAAGAGGCCCAC
CTCAAGCTCTCCGAACTGGGA

Retrieve as FASTA