View Redoxidase 8008

Entry information : ZmAPx[P]09(Zm00001d007569)

Entry ID	8008
Creation	2011-02-18 (Christophe Dunand)
Last sequence changes	2011-02-18 (Christophe Dunand)
Sequence status	theoretical translation / pseudogene
Reviewer	Not yet reviewed
Last annotation changes	2023-01-19 (Christophe Dunand)

Peroxidase information: ZmAPx[P]09(Zm00001d007569)

Name

ZmAPx[P]09(Zm00001d007569)

Class

Ascorbate peroxidase [Orthogroup: APx001]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea

Organism

Zea mays [TaxId: 4577 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	ZmAPx[P]09 start..stop	S start..stop
ZmAPx02	268	5.43e-93	1..137	1..137
SbAPx02	266	2.25e-92	1..137	1..137
SiAPx02	255	6.2e-88	1..137	1..137
TaAPx04-1B	241	2.88e-82	3..137	4..138

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8008' 'join(228027562..228027680,228027778..228027952,228028041..228028106,228028701..228028751)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	228027562..228027680	117	N° 2	228027778..228027952	173	N° 3	228028041..228028106	64	N° 4	228028701..228028751	49
join(228027562..228027680,228027778..228027952,228028041..228028106,228028701..2 28028751)

Literature and cross-references ZmAPx[P]09(Zm00001d007569)

Protein sequence: ZmAPx[P]09(Zm00001d007569)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	136 (256)
PWM (Da):	14481.55 (27832.8)
PI (pH):	8.22 (8.05)	Peptide Signal:	cut: 19 range:19-274

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MVKAYPTVNEDYLKAVDKAKRKLRGLIAEKNCAPLMLCLAWHSAGTSDVATKTGGPFGTMKNPAEQAHGANVGLEIAVRLL*PIKEQFPILSYIDFYLAGVVAVEVTGGPDVPFHPGRQDKPEPPPEGRLPGATQG

Retrieve as FASTA

Remarks

Pseudogene (chromo 2). Stop codon in frame and large 3' part is missing. Incorrect prediction from Phytozome (two times same fragment with same stop in frame)

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGTGAAGGCTTACCCCACGGTGAACGAGGACTACCTCAAGGCGGTCGACAAGGCCAAGCGCAAGCTCCGCGGCCTCATCGCCGAGAAGAATTGCGCCCCGCTCATGCTCTGCCTCGCG
CGTAAGGCTGCTCCCCCTTCTTATTCTTCGCCCGATCCCGATCCTATTCGGAAATCCCGAAACTACTACCACTCCAACTCCTTCCTTTCCCCTCGCCGATGGCACTCCGCGGGCACCTCC
GATGTGGCCACCAAAACCGGGGGGCCCTTCGGCACCATGAAGAACCCCGCCGAGCAGGCACACGGAGCCAACGTCGGGCTAGAAATTGCAGTCAGGCTGCTATAGCCCATCAAGGAGCAG
TTCCCCATCCTATCCTACATTGACTTCTACCAGAGGTTACCTACCTATTGCAACTTCGATTACCCATCCTTTCGTATGATTAGATAGACTAACACAAATTTATTTATGGTTGCGGTGTTG
CAGCTTGCTGGAGTCGTGGCAGTCGAGGTAACCGGCGGACCTGATGTCCCCTTCCACCCCGGGAGACAGAGGTGAGGCTGGTCCCTTTTCTAATAAACCTTTTTAGTTGTATATTAGTTA
AGAAGATGCAGTGTTTGTCGGAGGCTCATAAGTGTGGTTTGGAGAATTCATAACCTGTTCTTTGGCAAATACAGATTGCTTCGAACATGTGGCCTCTCAGTGAGACACACATCCTTGGTC
TTATGTTGGATATGTAAAAACTAATAATCAAGCCCTAGACTAATCCAACCCAAACCCAAGATTTTGGTAGGGTTTATTTAAGCAAAACTAACCCTATTGTCATCAGCCTGTCTACCATTG
TACCTGGGAAAGTGGTCTTGATGCTGACACATGTTTCCATTGTTTGATGGCCAGCTTATTTGTTAAATAGAGGATAAGCTTGTATAATTAGTAACTAGCTATGTACTGTGTGATGTATTA
TTTTACATGGGGCATAAAATACTTGTAGTAGTTTATTGCCTAATACTCTTGCCTGGGAGCTGTAGACGATATAGTGCCGCGAGTGGGAATATGTTATTAGGCATCATTACTTTAGACTGT
TGTTTCTTTACTATATTTGTCTTGTAGCTACAGATGTTGATGAAAGCATTGTCTTTATTGTGTAGGACAAGCCTGAGCCTCCACCGGAAGGTCGCCTTCCTGGTGCCACCCAAGGT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGTGAAGGCTTACCCCACGGTGAACGAGGACTACCTCAAGGCGGTCGACAAGGCCAAGCGCAAGCTCCGCGGCCTCATCGCCGAGAAGAATTGCGCCCCGCTCATGCTCTGCCTCGCA
TGGCACTCCGCGGGCACCTCCGATGTGGCCACCAAAACCGGGGGGCCCTTCGGCACCATGAAGAACCCCGCCGAGCAGGCACACGGAGCCAACGTCGGGCTAGAAATTGCAGTCAGGCTG
CTATAGCCCATCAAGGAGCAGTTCCCCATCCTATCCTACATTGACTTCTACCAGCTTGCTGGAGTCGTGGCAGTCGAGGTAACCGGCGGACCTGATGTCCCCTTCCACCCCGGGAGACAG
GACAAGCCTGAGCCTCCACCGGAAGGTCGCCTTCCTGGTGCCACCCAAGGT

Retrieve as FASTA