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Entry information : EgrAPx08 (Eucgr.F04344 / Egrandis_v1_0.012544m)
Entry ID 8023
Creation 2011-02-04 (Christophe Dunand)
Last sequence changes 2011-02-07 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2013-10-30 (Qiang Li)
Peroxidase information: EgrAPx08 (Eucgr.F04344 / Egrandis_v1_0.012544m)
Name (synonym) EgrAPx08 (Eucgr.F04344 / Egrandis_v1_0.012544m)
Class Ascorbate peroxidase    [Orthogroup: APx2002]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrAPx08
start..stop		 S start..stop
EglAPx08 884 0 1..446 1..446
EguAPx08 879 0 1..446 1..446
EcamAPx08 717 0 95..446 1..352
InAPx06 667 0 18..446 8..423
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 52379874..52380122 247 N° 2 52380468..52380611 142 N° 3 52381090..52381210 119 N° 4 52381284..52381384 99
N° 5 52381495..52381582 86 N° 6 52382258..52382325 66 N° 7 52382412..52382498 85 N° 8 52383702..52383776 73
N° 9 52383864..52383941 76 N° 10 52384027..52384131 103 N° 11 52384639..52384710 70 N° 12 52384997..52385149 151
join(52379874..52380122,52380468..52380611,52381090..52381210,52381284..52381384 ,52381495..52381582,52382258..52382325,52382412..52382498,52383702..52383776,523 83864..52383941,52384027..52384131,52384639..52384710,52384997..52385149)


exon

Literature and cross-references EgrAPx08 (Eucgr.F04344 / Egrandis_v1_0.012544m)
DNA ref. Phytozome 12:   scaffold_6 (52379874..52385149)
Protein sequence: EgrAPx08 (Eucgr.F04344 / Egrandis_v1_0.012544m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   446 (378)
PWM (Da):   %s   48195.85 (41501.4) Transmb domain:   %s   o426-445i
PI (pH):   %s   8.82 (5.60) Peptide Signal:   %s   cut: 22 range:22-399
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQLLPLQPQSFSSSPPPSASTATAPMASLTGAAAASRLLPSASRARLSLSLSSSAGRSPASPLSSLRCLRGSSPLASRLFLSQRRPSMHLLAAQYSGAASPKCAASDPEQLKGAREEIKE
LLKTKFCHPLLVRLGWHDAGTYNKNIEEWPKRGGANGSLRCEIELKHAANAGLVNALKLIEPIKEKYPSVTYADLFQLAGATAIEEAGGPKIPMKYGRVDVSKPEECPEEGRLPDAGPPS
PANHLREVFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERKDEDLLVLPTDGVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAK
LSNLGAKFDPPEGIVIDGPAKAAPEKFVAATYSSGKRELSDAMKQKIRAEYEGFGGSPDKPLQSNYFLNIIIVIAALALLSSLVVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Alternative transcript predicted from Phytozome (Egrandis_v1_0.015028m. last exon is missing). Correct prediction from phytozome.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAACTCCTCCCCCTCCAACCGCAGTCCTTCTCCTCGTCACCGCCACCATCCGCGTCGACAGCAACGGCGCCCATGGCTTCTCTCACCGGCGCCGCCGCCGCCTCCCGCCTCCTCCCC
TCCGCCTCCCGCGCCCGCCTCTCCCTCTCCCTCTCCTCCTCCGCCGGCCGCTCCCCTGCTTCTCCTCTCTCCTCTCTCCGATGCCTCCGCGGATCGTCCCCGCTCGCTTCTCGCCTCTTC
CTCAGCCAGAGGTACGCCCGCGCTTGCTTCCTTTCTTTCCTCCAATCTCGCGTCTCGCGTCTTCCTCGGCCAGCTCGAGTTTAGGATTGGGCGTTCCTCTCTCAGTGGAGCATTCGCGTG
TGGTGATCGTGCGTCGCTTTGCTTTGCTCTCGCTGTTTTGCTCCGATTAGCTGCGTTTCGGTTCGGTCTCTCTCTGAGTGCGTCTGTCCGGACGTAGCTCTGCTTAAGTCGTCTACGTTG
GATAAGCGCGTGTGGATCGTGTACATTCCGGTCCTGTTCCCTTGTTGCTGTTTCGATTCCGTCGCCTCGTACTGCTTCCGTAGTGGTTTTCGGCTTGACTCGTGATGAAAATGCAGAGGA
GGCCGTCCATGCACCTGTTGGCCGCGCAGTACAGCGGAGCCGCGTCTCCTAAATGCGCCGCGTCCGATCCGGAGCAGCTGAAGGGCGCCAGGGAAGAAATTAAGGAGCTTCTCAAGACTA
AGTTCTGTCATCCTCTTCTGTGGTAACGTGCCTTCGTATCCTCTGCAAAATGATTAGTTCTTATTCTGCCTGTTTGTGTCGTTTGTTTGAATTAGCCGGCTCTGATTTTCAGTGATTTTG
GAAGATATATACTTTAATCGCGGCACGAGATGATGCTGAATGAACGAAATTGCTCTTGCTATTGTAATGTGTTTAGCCTACTGCACAGATTCATCTATCCCCTGAAGAAAGCATATCTAT
TTTTGGAATGAACCCTTAGTTGAGAAAATACACCTCTGAGATGCTATGGATAATTTAAGCACCTGAGATTTTGAAACTTCATTACATTGTTCCCATCCATTTAGCTAGCTGACAACAGAG
AACTGTAAATCCTGAAGTGGCTAATCACCATGTTCCCACTCGTCTATGCAATCTACTAGGTCTGACAGTCTCTGCATTACATGTGTTTTGTAGGAAAAGGAAATAGAATTTGCCGTTAAT
GACATATGAGTACTTTACAGGTTCGGTTGGGATGGCATGATGCTGGTACTTATAATAAGAACATCGAAGAATGGCCTAAAAGAGGTGGAGCTAACGGGAGTCTTCGGTGTGAAATTGAGC
TTAAGCATGCAGCTAATGCTGTGGTAATAATTTAGCAGTGATACTACGGGTGGCATGACTTGTTTCTTGAACTTCTCTCAAAACTAGCTTTTACAGGTCTTGTAAATGCACTAAAACTTA
TTGAGCCAATCAAAGAAAAATATCCCAGTGTGACATATGCAGACTTGTTTCAGCTGGCTGGCGCTACTGCTATCGAGAGGTCAGTTTTTGCGCTCTTAATTGCTTAACCTGAGATTTCTT
GAAGCCATATGTAACCTGAGATTCACTCGTTCTTTGTGAAAATGTTCTTCCTTTTACTTTATTCTTCAGGAAGCTGGTGGTCCCAAGATTCCCATGAAGTATGGAAGAGTTGATGTCTCA
AAACCTGAGGAGTGCCCTGAAGAAGGGAGGCTTCCTGTGGTGAGTGAAACATTGTTGTTCATTAAAGAGTAGACATCCACTCGGCTTTGTTGTACTAGGGGATCACTAATTTGGCTCTAT
GAAGCACTGTAACTATCTCGCGCAAGTTGTTGCGATGTGCCGATTATTCGACTTCTTTTTCTATGATAAATCTGAGTGGGCACCCTAACACGCAAAGGCTTCTTTTTTAGGTGAGATTTG
TACTTAAGGTTGAAGGTGGTAATTTTAAAGAACTGTAATTTGCTGATTTGGGCAACAGATGAAGTTCTAGATGACTTGATTCATTTAGGCATTTACTAAAAAAATTCAAGCAACAAGAGA
TGTATTCATCCTAGGTCTGTGTTTTGTTTCTGAATGGATCACATTCGTATGCGTGGTAAGCTCTTGAAACAAAGCATTGTTTGGAAAAAAAAAGAATATGCATTTAGATGCGCTTTATCA
CACATAAATGAACTTGAATATCCCGTCCTTTCTATGGTCAGAAGTCATTTTCTATCTCTCGTCTGGAGTTTTCACTTTTTTATTCTGTCTCCAGTGATTGATTTCTTCTCTTTCTCGGAT
CCTTTTGTCTCACTTATTAGTGTACTTTCTACTTCTGCCAGAAAAAAAGTTTTTGTCGGTTCCTCTTGGAACAATCCATTTCTTCTCTTTTTACTGAACAGTTCTTTCTTTCAGATGCTG
GCCCCCCTTCACCAGCCAATCATCTCCGGGAAGTTTTCTACAGGATGGGACTAAATGACAAGAGGTTTTTGTAATCGTTACCTAATGGGATGTTGTGTGCTATTTGTGTGTATCTCATGT
GCTTGAGACTATGAATTCTCTGTTCTGCAGGAAATAGTTGCTTTATCTGGGGCACACACTCTTGGAAGGTCAAGACCAGAACGTAGTGGGTGGGGCAAGCCAGAAACAAAGTACACGCGG
TAACTAATTACTTTCTATTTATTAATGTAATGCTCCGTACTAATCATTTGACAAACTCAACTTGCCATAGGAATTCTGAAACAGCATGCATAGTGTCGAGAATGTATTTTCCATGGTTAC
CATTGGTGAATTGAAAGTTATCCTCGATATACAATTAGAGTTATGAACTCTTGAGCATCTTTAAACGAATAACAGGGAACAGGACTCTGATGGTCATAGTCTTGTCCATTAAACGTGAAA
AACTACAGAAATGTTATGTTTGGATTTAGAAACAATATTTCATTGAGCTCCAAGCACTTAAGGAGCTGTGCAGTAGGATGGCGTTCTATCAGTGATCAACCATCAGAAATAGATTGATAT
TCCCAAGGACGTTGTTGTAAATTCTTTTATGTGCTTGTAATCTCCATTGTCTCACACAGTTGCGACTCATGATTTGGGTTACAATATTTTGGCTTGATGGTCACGATGATGCCCAGAAAA
GGTAGCCATTTATAGTGTGGCTTGTGACCACGTTAATGAATCTCAATAGCCATATTTGTTGCCATGGGATTTGCGCCTCAGAGTCTCTTTTGTTAAGGATGACAGTTGTCTATTAATTTC
CATAGAGGAGGTCCATATCAACTGATATTTGCAGATCTTTTCTTCTAGGAGTACAAGAAGCAAGCATTTTAGGGGTTAGTTGGTCAGCTTAAAGAGTTTGTTTACATCATTACCGTCTGT
GTAGTATCAAATCCTCTATAAAACTCAAGAACTCGGCATCTTTCTAAAAAGTATCCATCCATGTCTTTTAGGTCTTATTTACCTCTTTTACATGTGTCCATTGTAATGTCACATCTTCTT
ACTTTATCATCTGTAGGCCATTGCCTTTTGTGTCCAAACTACTTTAGAAAGGTTTTTCATCTTATTCCCACTTTAAGCCACCCCCTCAGCTATGATCTGTTCTAACTTGATCTTGTGTTA
GTGTCCAAATATCCTTAGGCATTATTATCTTAGCTATATTAGTTTTGTACGTGTGCCTTTCTTACCGACAGTAGAAATGGTTGTGGACATTGAAGCTTGGGAAAAGTTTCTCCCCAGTGG
ACAAATTAATGGCTGCTTGAATTGAACTTATATGACTATTTTCAACAATATAGTTTAGTTGAAATGATTAAGAATAGTATAAATGGCCTTCATGAATCGTAATGGCCTCCATCATGTCAC
AGAAAGATGGACCAGGAGCACCAGGTGGACAGTCGTGGACCGTGCAATGGTTAAAGTTTGATAACTCATACTTCAAGAGGTTTGCGAGTTGAATCCATACGTACTTTTTCCATGGGAAGG
TGGTGATTCAGAATCAAGTGGGATGCTAACTTGATGTTTCATGCAGGATATAAAAGAACGGAAGGATGAAGACCTGCTGGTATTGCCAACTGATGGTGTTCTTTTTGAAGATCCTTCATT
CAAGAGGTAATAAGAGTTTTTCTGAAAGCTCCAAAACAAAAGAAGTCTCTAAATTTGAGTTATCTTTCTAAAGAATGTTAGCGAATTGTAGGTCTATGCTGAGAAATACGCTGAAGATCA
GGAAGCATTCTTTAAGGATTATGCTGAAGCACATGCAAAACTCAGCAACCTTGGTGCAAAATTTGATCCTCCAGAGAGGTTTGTCACTGCTCTCTTATGGTCATTCCTTTGCTAATTGTA
GTGACGCTGGACCGTGTTCGAATCATTTCCAATGCCTTCTTAATTTTAAGTTTTTAAGGAGCCAATGGCCAAAGTTCTATAAGAACTGTCCGAATATTTGAAATTCTTCCATGACGTTCA
TGTTGGCTATTTGACCATCTGTTGTGATGGCATTGGCCTCTGGATCAAGTGAAATTTGCAGGATTGATGGGGCCTCCCATTTGGAGACGCATCAATTGTAGTTTTATTGCCAAATATTGC
ACGGCATGAATAACCATCAAGTTCATCTTATCAGCATTGATGTTTGGCTTGTTATGAAAAATTTGTGCGTAGATAACAAGCGCTTCTACCTATTTACAAATTTTTCTTGGGTCTAGATTT
ACAAGTTTTTCTTCAGTCTAGATTTACTAGTTTGCAATTTAACTTATACAGAACTTGGGTTAGAGTTGTGGTGAAAACTAAAGCTTATGTTGAGTAATCTTTCAGGGTATCGTGATAGAT
GGTCCTGCTAAAGCTGCACCGGAGAAGTTTGTGGCTGCCACCTACTCATCTGGAAAGAGGTTATACTAAGAAATAACTTACATCTTGATCTTCCATTGTTACAGAGAGTTCCTTTTCATT
ATGTGATCTTTAACGGAGAGACTATTTCTTTGCAAATTGTTCATGTTCCTTGTTTCTTATGGTTTGCTGCAGGATTAGAAAACAATGTCCCGTTTTCTGTGCCGTGTCTTTTATAAATAA
AAGATGGAAGATATTTTCAATCTTGTGAAACCACTTCTTAAAACTTGGGGAGTCTTAGCGAAAGGAGGAATAAAATTCAACGCGTGTTGCGTATTTGAATTGCAGAGAGAACTGTCAGAT
GCTATGAAGCAGAAGATCCGAGCTGAGTATGAAGGATTCGGTGGCAGCCCAGATAAGCCCCTGCAATCCAACTATTTTCTGAACATAATCATTGTCATTGCTGCTTTGGCACTCTTGTCA
TCTCTAGTAGTAAATTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAACTCCTCCCCCTCCAACCGCAGTCCTTCTCCTCGTCACCGCCACCATCCGCGTCGACAGCAACGGCGCCCATGGCTTCTCTCACCGGCGCCGCCGCCGCCTCCCGCCTCCTCCCC
TCCGCCTCCCGCGCCCGCCTCTCCCTCTCCCTCTCCTCCTCCGCCGGCCGCTCCCCTGCTTCTCCTCTCTCCTCTCTCCGATGCCTCCGCGGATCGTCCCCGCTCGCTTCTCGCCTCTTC
CTCAGCCAGAGGAGGCCGTCCATGCACCTGTTGGCCGCGCAGTACAGCGGAGCCGCGTCTCCTAAATGCGCCGCGTCCGATCCGGAGCAGCTGAAGGGCGCCAGGGAAGAAATTAAGGAG
CTTCTCAAGACTAAGTTCTGTCATCCTCTTCTGGTTCGGTTGGGATGGCATGATGCTGGTACTTATAATAAGAACATCGAAGAATGGCCTAAAAGAGGTGGAGCTAACGGGAGTCTTCGG
TGTGAAATTGAGCTTAAGCATGCAGCTAATGCTGGTCTTGTAAATGCACTAAAACTTATTGAGCCAATCAAAGAAAAATATCCCAGTGTGACATATGCAGACTTGTTTCAGCTGGCTGGC
GCTACTGCTATCGAGGAAGCTGGTGGTCCCAAGATTCCCATGAAGTATGGAAGAGTTGATGTCTCAAAACCTGAGGAGTGCCCTGAAGAAGGGAGGCTTCCTGATGCTGGCCCCCCTTCA
CCAGCCAATCATCTCCGGGAAGTTTTCTACAGGATGGGACTAAATGACAAGGAAATAGTTGCTTTATCTGGGGCACACACTCTTGGAAGGTCAAGACCAGAACGTAGTGGGTGGGGCAAG
CCAGAAACAAAGTACACGAAAGATGGACCAGGAGCACCAGGTGGACAGTCGTGGACCGTGCAATGGTTAAAGTTTGATAACTCATACTTCAAGGATATAAAAGAACGGAAGGATGAAGAC
CTGCTGGTATTGCCAACTGATGGTGTTCTTTTTGAAGATCCTTCATTCAAGGTCTATGCTGAGAAATACGCTGAAGATCAGGAAGCATTCTTTAAGGATTATGCTGAAGCACATGCAAAA
CTCAGCAACCTTGGTGCAAAATTTGATCCTCCAGAGGGTATCGTGATAGATGGTCCTGCTAAAGCTGCACCGGAGAAGTTTGTGGCTGCCACCTACTCATCTGGAAAGAGAGAACTGTCA
GATGCTATGAAGCAGAAGATCCGAGCTGAGTATGAAGGATTCGGTGGCAGCCCAGATAAGCCCCTGCAATCCAACTATTTTCTGAACATAATCATTGTCATTGCTGCTTTGGCACTCTTG
TCATCTCTAGTAGTAAATTGA

Retrieve as FASTA