Entry information : EgrPrx96 (Eucgr.F04195 / Egrandis_v1_0.017803m)
Entry ID | 8025 |
---|---|
Creation | 2011-02-04 (Christophe Dunand) |
Last sequence changes | 2011-02-04 (Qiang Li) |
Sequence status | complete |
Reviewer | Qiang Li |
Last annotation changes | 2013-10-30 (Qiang Li) |
Peroxidase information: EgrPrx96 (Eucgr.F04195 / Egrandis_v1_0.017803m)
Name (synonym) | EgrPrx96 (Eucgr.F04195 / Egrandis_v1_0.017803m) | ||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Class | Class III peroxidase [Orthogroup: Prx005] | ||||||||||||||||||||||||||||||||||||
Taxonomy | Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus | ||||||||||||||||||||||||||||||||||||
Organism | Eucalyptus grandis [TaxId: 71139 ] | ||||||||||||||||||||||||||||||||||||
Cellular localisation | N/D |
||||||||||||||||||||||||||||||||||||
Tissue type | Xylem |
||||||||||||||||||||||||||||||||||||
Inducer | N/D |
||||||||||||||||||||||||||||||||||||
Repressor | N/D |
||||||||||||||||||||||||||||||||||||
Best BLASTp hits |
|
||||||||||||||||||||||||||||||||||||
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8025' 'complement(join(50188288..50188911,50190261..50190455,50191193..50191426))' |
Exons►
|
Literature and cross-references EgrPrx96 (Eucgr.F04195 / Egrandis_v1_0.017803m)
Literature | Qiu,D., Wilson,I., Gan,S., Washusen,R., Moran,G. and Southerton,S. Gene expression in Eucalyptus branch xylem deficient in G-layer enriched tension wood
|
---|---|
DNA ref. | Phytozome 12: scaffold_6 (50191426..50188288) |
EST ref. | GenBank: EW688448.1 [5' end] |
Protein sequence: EgrPrx96 (Eucgr.F04195 / Egrandis_v1_0.017803m)
Sequence Properties first value : protein second value (mature protein) |
|
||||||||||||
Sequence Send to BLAST Send to Peroxiscan |
|
||||||||||||
Remarks | Complete sequence from genomic and 1 EST. which is close to record Eucgr.L02740 (Egrandis_v1_0.017838m) (scaffold_1315 (6279..3264) complement(join(3264..3887,5113..5307,6046..6279) )in phytozome. Correct prediction from phytozome. | ||||||||||||
DNA ► Send to BLAST |
|
||||||||||||
CDS► Send to BLAST |
|