Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
329 (301) |
PWM (Da): |
36130.64 (33021.1) |
Transmb domain: |
i9-31o |
PI (pH): |
10.09 (10.18) |
Peptide Signal: |
cut: 29 range:29-329 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MMVMRSDRHSLILGCVLGFLVLLGGCHGGSLKKNFYSKSCPLAEEIVRNVTWRHVAANITLPAKFLRMHFHDCFVRGCDGSVLLNSTKNNTAEKEAIPNLTLAGFDVIDDIKAEVEKKCP GVVSCADILALAARDSVSFQFKRSTWKVLTGRRDGTVSLASEALANIPSPFLNFTALQQNFANKGLSVRDLVVLSGAHTIGVGHCNAFSVRLYNFSGKGDQDPSLNSTYAASLKNQCKNL TDNTTFVPMDPITPLSFDTRYFTVLRQRRGLFESDAALLTNPNSASITREMLNSRRFFKSFRTSIKRMGAISVLTGKSGEIRKVCSKIN* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic. Incorrect prediction from Phytozome (large part of exon 1 is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGATGGTGATGAGGAGTGATCGACACTCATTGATTTTAGGGTGTGTTTTAGGGTTCCTTGTGTTGTTAGGAGGCTGCCATGGGGGGAGCCTGAAGAAGAACTTCTACAGCAAAAGCTGT CCCTTGGCGGAGGAGATCGTGAGGAACGTGACGTGGAGGCATGTCGCGGCGAACATCACACTGCCGGCGAAGTTCTTGAGGATGCATTTCCATGACTGCTTTGTTAGGGTAAGCTTCCTT GTTAATTACTCTTGACTCGTGTGATGACATAGATGCTTCGTTAGACTGCTCAGTTAGAGCAAGCGCAGTACATGTAACAACATAACCTTGGTCGATATTCGCCAAGGACCCGGACGTCAT GGTAGACCAATAGAGTTGAATCATGTATATCACATATCATATAAGAGCATACCCTAGAGCGTCATTTAGGATTCATGTTCTAATAATCATTAGTACCCAAGGTTCACAATGCACTCATAA CAATACTAAAATTAGTCTCTCTTCCTCTCGATAGTCTTAAATTTATAGATTAAAAATCATGTGAATTTGACATTGCGAGCCATGTGTAAATACCAACGAAAAAAAAAGCACTTCTTAGCA ATGTGACCTGCATTGTTAGTGAATTTTTCTCGCAAAACGAGGAGATGAGGCCAACATGCATTTGATCTCCACTAAATTGTAATTACCCTGTCGCGAAATCGAAATCACATATCCATTTAA TTTTATCAATCCGTACATGAACGTGGGAATTAGAAAGTATACAAAACACCATCATTTATCGGACATGAGCCAAATAGTATTATTTACGTAAAATTATCAACGCTACCTCTTTTAGCCCAA CCCACTTGTAATGTCGCTCATAAGTTCAAGACTGGTTGCTCATTATCATTATTTAACCAAAGATCAGTAAATGAAAGCAGGTCGTCATGTACCTGCGGTGACCAATTTCTCATAAGTGCA CATTAGATCTACAAGAATGAATCGAGAAAAGGCCAATGAACAATGGCAATTTCATGGTTCCATGCAATTTCCAGGGGGATGTGACGGCTCAGTCTTGCTGAACTCGACCAAGAATAATAC GGCGGAGAAGGAGGCAATCCCGAACCTCACGTTGGCGGGGTTTGATGTTATCGACGACATCAAAGCGGAGGTCGAGAAGAAGTGCCCGGGCGTCGTATCCTGCGCCGACATTTTGGCTCT GGCCGCAAGGGACTCCGTTTCGTTCCAAGTAAGTGCAAAAACATGTGAAGAAAGGAGCAAAGACAAATTCTTCTTTTCTAATCTAGAAGGATTTGTCAGAATTGACCATGCTAGGCATAT ATGAACACTTCTTTCTTCTTCTTTTTCAACACTTGGTATATATAATGAATATACATGAACATAGGCACATCGACATAAGGATCGATTTTACTGTTCAGTCTGGGATTTGGATCCTCTCGA ATAATTAACTCATAAGTGAGCCATCTCCAGTCTTTTACGTGATACCCTGACATAAGGCAAAGAAGAGATCCAATGGCCAAAAAACCTGCTTTCCCATCTTCTCTCTTTCTTTTCCCTGAT TTCACACCGAGCAACCCCCTACCACCACCATCCACCATGGTGTCGGCGCCACTCTGTTGCCTCCTTGGCCCTCCACCTCCCTCCGTTTTCTCTGATTTTGTGCTCGATTTTTCATAAGAA TGGGGGGCAATTTCGGTACTCCTAAAACAAATAGACATGGCCGAGTTATGGACTTAATTGACAGGAGCCTAATCATAGTACCGGACATACATGCACCTGTCCGACAACGCCGTGCAACGT CGAAAACTTACATCTTTCTTGACCACGAGAGAAGCCACTTAAGCATGTAAACTCCATATCACAAATATCTCCCGCCAAACTCATTAGACTTTTCTTCATTCTCTTCTTTCATACTTTTGC AGTTTTCAAAAGGTCAACGTGGAAAGTGCTGACCGGAAGAAGAGACGGCACGGTGTCGCTAGCCTCCGAGGCCTTGGCCAACATCCCATCCCCTTTCCTCAACTTCACCGCCCTCCAACA GAATTTCGCCAATAAAGGGCTAAGCGTGCGTGACCTTGTTGTTTTATCAGGTACCGTAATTTCCTTACTAGCTCTCATGGGAAAAAGTTGCTCTCAAAAAAATTCCCGATCGAACCCGAA AGTTGGGCTTTACACATGGATCGCGATAGCTGTAAGCAAATAGTTGCATCGAATCAACAACCAGATCGTAGAACAAAGACACGATAACGAGGAAAGAGAGAACCTCTCGCATCGGAGCTC ATCAATTGACTCTGCCACTATGTTAGAAAGCCGCTAGCTTATGCCGAGAGCTTAAATTGCCCTCAAAAACAGGCTAATCACGTACATATTGAGCGTATCTGCGCGTTCTCTTAGTTTTTT GTTCTGGACGAATAATAATGCTTTTCGAGTGGTGTTTAAAGGTGTGCGCACACAATAGGAGTAGGGCACTGCAACGCCTTCAGCGTAAGGCTCTACAACTTCTCCGGAAAAGGCGACCAA GACCCATCCTTGAACTCCACCTACGCCGCCTCATTGAAGAACCAGTGCAAGAACCTTACCGACAACACCACCTTCGTGCCGATGGACCCAATCACCCCTCTCAGCTTCGACACTCGCTAC TTCACCGTCCTCAGACAGCGCAGGGGCCTCTTCGAATCCGACGCCGCGCTGCTCACGAACCCCAACTCGGCCAGTATCACTCGGGAGATGCTCAACTCGCGCAGGTTCTTCAAAAGTTTC AGGACGTCCATCAAGAGGATGGGGGCGATCTCCGTCCTCACAGGGAAATCTGGGGAGATTAGGAAGGTCTGTAGTAAGATCAACTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGATGGTGATGAGGAGTGATCGACACTCATTGATTTTAGGGTGTGTTTTAGGGTTCCTTGTGTTGTTAGGAGGCTGCCATGGGGGGAGCCTGAAGAAGAACTTCTACAGCAAAAGCTGT CCCTTGGCGGAGGAGATCGTGAGGAACGTGACGTGGAGGCATGTCGCGGCGAACATCACACTGCCGGCGAAGTTCTTGAGGATGCATTTCCATGACTGCTTTGTTAGGGGATGTGACGGC TCAGTCTTGCTGAACTCGACCAAGAATAATACGGCGGAGAAGGAGGCAATCCCGAACCTCACGTTGGCGGGGTTTGATGTTATCGACGACATCAAAGCGGAGGTCGAGAAGAAGTGCCCG GGCGTCGTATCCTGCGCCGACATTTTGGCTCTGGCCGCAAGGGACTCCGTTTCGTTCCAATTCAAAAGGTCAACGTGGAAAGTGCTGACCGGAAGAAGAGACGGCACGGTGTCGCTAGCC TCCGAGGCCTTGGCCAACATCCCATCCCCTTTCCTCAACTTCACCGCCCTCCAACAGAATTTCGCCAATAAAGGGCTAAGCGTGCGTGACCTTGTTGTTTTATCAGGTGCGCACACAATA GGAGTAGGGCACTGCAACGCCTTCAGCGTAAGGCTCTACAACTTCTCCGGAAAAGGCGACCAAGACCCATCCTTGAACTCCACCTACGCCGCCTCATTGAAGAACCAGTGCAAGAACCTT ACCGACAACACCACCTTCGTGCCGATGGACCCAATCACCCCTCTCAGCTTCGACACTCGCTACTTCACCGTCCTCAGACAGCGCAGGGGCCTCTTCGAATCCGACGCCGCGCTGCTCACG AACCCCAACTCGGCCAGTATCACTCGGGAGATGCTCAACTCGCGCAGGTTCTTCAAAAGTTTCAGGACGTCCATCAAGAGGATGGGGGCGATCTCCGTCCTCACAGGGAAATCTGGGGAG ATTAGGAAGGTCTGTAGTAAGATCAACTAA |
Retrieve as FASTA
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