View Redoxidase 8128

Entry information : EgrPrx123 (Eucgr.H01218 / Egrandis_v1_0.023465m)

Entry ID	8128
Creation	2011-02-04 (Christophe Dunand)
Last sequence changes	2011-02-09 (Christophe Dunand)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2012-03-09 (Qiang Li)

Peroxidase information: EgrPrx123 (Eucgr.H01218 / Egrandis_v1_0.023465m)

Name (synonym)

EgrPrx123 (Eucgr.H01218 / Egrandis_v1_0.023465m)

Class

Class III peroxidase [Orthogroup: Prx011]

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus grandis [TaxId: 71139 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EgrPrx123 start..stop	S start..stop
EglPrx123	665	0	1..329	1..329
EcamPrx123	662	0	1..329	1..329
EguPrx123	661	0	2..329	1..328
CmicPrx01	471	6.22e-169	9..329	5..324

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	14645920..14646147	226	N° 2	14644922..14645113	190	N° 3	14644062..14644227	164	N° 4	14643307..14643710	402
complement(join(14643307..14643710,14644062..14644227,14644922..14645113,1464592 0..14646147))

Literature and cross-references EgrPrx123 (Eucgr.H01218 / Egrandis_v1_0.023465m)

DNA ref.	Phytozome 12: scaffold_8 (14646147..14643307)

Protein sequence: EgrPrx123 (Eucgr.H01218 / Egrandis_v1_0.023465m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	329 (301)
PWM (Da):	36130.64 (33021.1)	Transmb domain:	i9-31o
PI (pH):	10.09 (10.18)	Peptide Signal:	cut: 29 range:29-329

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MMVMRSDRHSLILGCVLGFLVLLGGCHGGSLKKNFYSKSCPLAEEIVRNVTWRHVAANITLPAKFLRMHFHDCFVRGCDGSVLLNSTKNNTAEKEAIPNLTLAGFDVIDDIKAEVEKKCP
GVVSCADILALAARDSVSFQFKRSTWKVLTGRRDGTVSLASEALANIPSPFLNFTALQQNFANKGLSVRDLVVLSGAHTIGVGHCNAFSVRLYNFSGKGDQDPSLNSTYAASLKNQCKNL
TDNTTFVPMDPITPLSFDTRYFTVLRQRRGLFESDAALLTNPNSASITREMLNSRRFFKSFRTSIKRMGAISVLTGKSGEIRKVCSKIN*

Retrieve as FASTA

Remarks

Complete sequence from genomic. Incorrect prediction from Phytozome (large part of exon 1 is missing).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGATGGTGATGAGGAGTGATCGACACTCATTGATTTTAGGGTGTGTTTTAGGGTTCCTTGTGTTGTTAGGAGGCTGCCATGGGGGGAGCCTGAAGAAGAACTTCTACAGCAAAAGCTGT
CCCTTGGCGGAGGAGATCGTGAGGAACGTGACGTGGAGGCATGTCGCGGCGAACATCACACTGCCGGCGAAGTTCTTGAGGATGCATTTCCATGACTGCTTTGTTAGGGTAAGCTTCCTT
GTTAATTACTCTTGACTCGTGTGATGACATAGATGCTTCGTTAGACTGCTCAGTTAGAGCAAGCGCAGTACATGTAACAACATAACCTTGGTCGATATTCGCCAAGGACCCGGACGTCAT
GGTAGACCAATAGAGTTGAATCATGTATATCACATATCATATAAGAGCATACCCTAGAGCGTCATTTAGGATTCATGTTCTAATAATCATTAGTACCCAAGGTTCACAATGCACTCATAA
CAATACTAAAATTAGTCTCTCTTCCTCTCGATAGTCTTAAATTTATAGATTAAAAATCATGTGAATTTGACATTGCGAGCCATGTGTAAATACCAACGAAAAAAAAAGCACTTCTTAGCA
ATGTGACCTGCATTGTTAGTGAATTTTTCTCGCAAAACGAGGAGATGAGGCCAACATGCATTTGATCTCCACTAAATTGTAATTACCCTGTCGCGAAATCGAAATCACATATCCATTTAA
TTTTATCAATCCGTACATGAACGTGGGAATTAGAAAGTATACAAAACACCATCATTTATCGGACATGAGCCAAATAGTATTATTTACGTAAAATTATCAACGCTACCTCTTTTAGCCCAA
CCCACTTGTAATGTCGCTCATAAGTTCAAGACTGGTTGCTCATTATCATTATTTAACCAAAGATCAGTAAATGAAAGCAGGTCGTCATGTACCTGCGGTGACCAATTTCTCATAAGTGCA
CATTAGATCTACAAGAATGAATCGAGAAAAGGCCAATGAACAATGGCAATTTCATGGTTCCATGCAATTTCCAGGGGGATGTGACGGCTCAGTCTTGCTGAACTCGACCAAGAATAATAC
GGCGGAGAAGGAGGCAATCCCGAACCTCACGTTGGCGGGGTTTGATGTTATCGACGACATCAAAGCGGAGGTCGAGAAGAAGTGCCCGGGCGTCGTATCCTGCGCCGACATTTTGGCTCT
GGCCGCAAGGGACTCCGTTTCGTTCCAAGTAAGTGCAAAAACATGTGAAGAAAGGAGCAAAGACAAATTCTTCTTTTCTAATCTAGAAGGATTTGTCAGAATTGACCATGCTAGGCATAT
ATGAACACTTCTTTCTTCTTCTTTTTCAACACTTGGTATATATAATGAATATACATGAACATAGGCACATCGACATAAGGATCGATTTTACTGTTCAGTCTGGGATTTGGATCCTCTCGA
ATAATTAACTCATAAGTGAGCCATCTCCAGTCTTTTACGTGATACCCTGACATAAGGCAAAGAAGAGATCCAATGGCCAAAAAACCTGCTTTCCCATCTTCTCTCTTTCTTTTCCCTGAT
TTCACACCGAGCAACCCCCTACCACCACCATCCACCATGGTGTCGGCGCCACTCTGTTGCCTCCTTGGCCCTCCACCTCCCTCCGTTTTCTCTGATTTTGTGCTCGATTTTTCATAAGAA
TGGGGGGCAATTTCGGTACTCCTAAAACAAATAGACATGGCCGAGTTATGGACTTAATTGACAGGAGCCTAATCATAGTACCGGACATACATGCACCTGTCCGACAACGCCGTGCAACGT
CGAAAACTTACATCTTTCTTGACCACGAGAGAAGCCACTTAAGCATGTAAACTCCATATCACAAATATCTCCCGCCAAACTCATTAGACTTTTCTTCATTCTCTTCTTTCATACTTTTGC
AGTTTTCAAAAGGTCAACGTGGAAAGTGCTGACCGGAAGAAGAGACGGCACGGTGTCGCTAGCCTCCGAGGCCTTGGCCAACATCCCATCCCCTTTCCTCAACTTCACCGCCCTCCAACA
GAATTTCGCCAATAAAGGGCTAAGCGTGCGTGACCTTGTTGTTTTATCAGGTACCGTAATTTCCTTACTAGCTCTCATGGGAAAAAGTTGCTCTCAAAAAAATTCCCGATCGAACCCGAA
AGTTGGGCTTTACACATGGATCGCGATAGCTGTAAGCAAATAGTTGCATCGAATCAACAACCAGATCGTAGAACAAAGACACGATAACGAGGAAAGAGAGAACCTCTCGCATCGGAGCTC
ATCAATTGACTCTGCCACTATGTTAGAAAGCCGCTAGCTTATGCCGAGAGCTTAAATTGCCCTCAAAAACAGGCTAATCACGTACATATTGAGCGTATCTGCGCGTTCTCTTAGTTTTTT
GTTCTGGACGAATAATAATGCTTTTCGAGTGGTGTTTAAAGGTGTGCGCACACAATAGGAGTAGGGCACTGCAACGCCTTCAGCGTAAGGCTCTACAACTTCTCCGGAAAAGGCGACCAA
GACCCATCCTTGAACTCCACCTACGCCGCCTCATTGAAGAACCAGTGCAAGAACCTTACCGACAACACCACCTTCGTGCCGATGGACCCAATCACCCCTCTCAGCTTCGACACTCGCTAC
TTCACCGTCCTCAGACAGCGCAGGGGCCTCTTCGAATCCGACGCCGCGCTGCTCACGAACCCCAACTCGGCCAGTATCACTCGGGAGATGCTCAACTCGCGCAGGTTCTTCAAAAGTTTC
AGGACGTCCATCAAGAGGATGGGGGCGATCTCCGTCCTCACAGGGAAATCTGGGGAGATTAGGAAGGTCTGTAGTAAGATCAACTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA