Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
324 (301) |
PWM (Da): |
34861.87 (32425.5) |
Transmb domain: |
i7-26o |
PI (pH): |
8.79 (8.73) |
Peptide Signal: |
cut: 24 range:24-324 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MATLKFLLVV ILCLAFAFGL ANSQGLQVGF YKKTCPNVEA IVKKATTDFV SRAPTLAAPL LRMHFHDCFV RGCDGSVLLN STKGNQAEKD AIPNQSLRGF QVIDAAKSAL EKQCPGIVSC
TDILALVARD AVSLINGPTW QVELGRRDGR VSILSEAIRN LPTPFDNFTT LKSSFGALGL SVKDLVVLSG GHTLGVSHCF SFGSRLYNFT GKGDTDPNMD QNYIGQLKTK CKPNDVTTTV
EMDPGSAKNF DTDYYTMVSK RRGLFASDAA LLTNTQTKAY VLSQLNTPGS TFFEDFGVSM VNMGKIGVLT GKAGEIRKHC AIRN
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic.Uncorrect prediction from SGN (missing part of exon 4 and fusion of 2 ORFs) |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCAACCT TAAAATTTCT TTTAGTTGTC ATTCTTTGTC TTGCATTTGC CTTCGGGCTT GCTAATTCAC AAGGCTTGCA AGTAGGGTTT TACAAGAAAA CATGTCCAAA TGTAGAAGCA
ATTGTCAAAA AGGCAACAAC TGACTTTGTT TCTCGTGCTC CTACTTTGGC TGCCCCATTA TTGAGAATGC ATTTTCATGA TTGTTTTGTT AGGGTAAGCA AGTGATTTAA TGCCTTATCA
TCTCTGCATA TATTATTTGG TTTTTTTTTT TTACGTTCAA TGCACTACAA AAGGATTAGT TTATGTATGG TCACTGAAAT TACTTGCTAA AACAGTAGAA AGTCTCTGGA AACTAAATTT
GTCATATAAA GTAACTAAAC TTTATACACT AATAGTAATT TCACAAATTT TACTCACATA GTACTTGGTA AATTTACCTT GCACAATGGA TGGGCCTGAG GATCCACATT TCAATATGAG
AGCTAATGAG AAGGGATTGG AGGTGTGAAT TGAGACATAT TTGGAGGGAA AGTAATATGA AGATGTTAGC TAAGCAAAGT CCCGGTCCTG CTCCTGGCTT AACCATCCTA CGTGAACCCC
TACTGCAATC AGAAAGTGAA AAAAGAATGA TAACTTAGGC GCGAGAACAC ATAGAATTGT TACAATTAGT TAGAGCGTAA AGCCTTAACA TGTTCCAAAA AAGGAAGTAT ACGGGTGGTA
ATTAAAATTT TAGTGACTTT ATTATTATGG TAAGTAAAGT TTAATATTTT TAATGTAGTT AAAAGATAGT TTTGTGATTT TATTGATTCT ATAAAATGAT GATGAAACCC TCTAGCTAAC
TGAACATCAT CTAACTAACA AAGTTCCAAA TAAACAAGTC TTCTTCTGAG TTTTTATCTA TATTTTTTTT ATGTAGGGAT GTGATGGTTC AGTGCTACTG AATTCAACAA AAGGTAATCA
AGCAGAGAAA GATGCAATTC CAAATCAAAG CCTGAGGGGA TTCCAAGTGA TTGATGCTGC TAAATCTGCT TTAGAAAAAC AGTGTCCTGG CATTGTGTCT TGCACTGATA TTTTAGCCTT
AGTAGCTCGT GATGCTGTTT CACTGGTAAC TAGTTAGTAC ATTCAGTCCA TTTATATATA ATTAGCATAT AAATGAAGTA TAATTCTTTC CTAAACACAT TATGGGTTGT TTCAGATTAA
TGGACCAACT TGGCAAGTAG AGTTGGGAAG AAGAGATGGG AGAGTTTCAA TTCTCTCAGA GGCCATAAGA AACCTGCCAA CTCCTTTTGA CAACTTTACT ACTCTAAAAT CATCATTTGG
CGCTTTGGGC CTAAGTGTAA AAGACCTTGT TGTTCTATCA GGTAAGTTTA TGGTTTGCAT CAAAATTAAA GTAAAATTAC TGCATCGGGA AGATTTAAAG TTCAAGAAAC AATAATCTTT
AGCTTTTATA TTCTTTGGAA ATCTGCACTT TTACCCCTTT AAATATCGAT AAATTCTAAT TTTGGTCCTT GTAATATCTG GCTATAAGCA CATTTAACTG TTAATTATTG AAATGCGAAC
TTTTGATCCC TTTGTTGTAA ATCTTTATAC ATATAACGAA CTATAAACCA TTATATTATT TGACAGCTCA TGCGTTATGT TAAGTTTGTA TCGTTACTCC ATATCTGAGG GTAATATAAT
TCTAGAAATA GTGTAAATGT AACATATTTT CTATATAAAG GGACCAGAAT GTCATAGTTT TTTAATAAAT TAGAGGTTAT ATATGCTCAG TCACTTATTA CAAGGACCAA AGCTAGAATT
TACCAATAAC CAAGCTAAGA ACCAAAAGCG CTATTATTAC TCTATCCTTT TCTTAATACT TTTTTCCTTA TTTATTTGAT ATAATATAGG TGGACATACT CTTGGGGTAT CACATTGTTT
TTCCTTCGGA AGTCGTTTGT ACAATTTCAC TGGTAAAGGT GATACAGACC CAAACATGGA TCAGAACTAC ATAGGTCAAT TGAAGACCAA ATGCAAGCCA AATGATGTGA CCACTACTGT
TGAAATGGAC CCTGGAAGTG CCAAGAATTT TGACACAGAT TATTACACTA TGGTTAGCAA AAGAAGAGGG TTGTTCGCAT CTGATGCAGC TCTTCTCACA AATACTCAAA CAAAAGCTTA
TGTCTTGTCC CAATTAAATA CCCCTGGATC AACTTTCTTC GAGGATTTTG GAGTATCAAT GGTGAATATG GGCAAAATTG GGGTCCTTAC TGGGAAAGCA GGTGAAATCA GAAAACATTG
CGCTATTAGA AATTAA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCAACCT TAAAATTTCT TTTAGTTGTC ATTCTTTGTC TTGCATTTGC CTTCGGGCTT GCTAATTCAC AAGGCTTGCA AGTAGGGTTT TACAAGAAAA CATGTCCAAA TGTAGAAGCA
ATTGTCAAAA AGGCAACAAC TGACTTTGTT TCTCGTGCTC CTACTTTGGC TGCCCCATTA TTGAGAATGC ATTTTCATGA TTGTTTTGTT AGGGGATGTG ATGGTTCAGT GCTACTGAAT
TCAACAAAAG GTAATCAAGC AGAGAAAGAT GCAATTCCAA ATCAAAGCCT GAGGGGATTC CAAGTGATTG ATGCTGCTAA ATCTGCTTTA GAAAAACAGT GTCCTGGCAT TGTGTCTTGC
ACTGATATTT TAGCCTTAGT AGCTCGTGAT GCTGTTTCAC TGATTAATGG ACCAACTTGG CAAGTAGAGT TGGGAAGAAG AGATGGGAGA GTTTCAATTC TCTCAGAGGC CATAAGAAAC
CTGCCAACTC CTTTTGACAA CTTTACTACT CTAAAATCAT CATTTGGCGC TTTGGGCCTA AGTGTAAAAG ACCTTGTTGT TCTATCAGGT GGACATACTC TTGGGGTATC ACATTGTTTT
TCCTTCGGAA GTCGTTTGTA CAATTTCACT GGTAAAGGTG ATACAGACCC AAACATGGAT CAGAACTACA TAGGTCAATT GAAGACCAAA TGCAAGCCAA ATGATGTGAC CACTACTGTT
GAAATGGACC CTGGAAGTGC CAAGAATTTT GACACAGATT ATTACACTAT GGTTAGCAAA AGAAGAGGGT TGTTCGCATC TGATGCAGCT CTTCTCACAA ATACTCAAAC AAAAGCTTAT
GTCTTGTCCC AATTAAATAC CCCTGGATCA ACTTTCTTCG AGGATTTTGG AGTATCAATG GTGAATATGG GCAAAATTGG GGTCCTTACT GGGAAAGCAG GTGAAATCAG AAAACATTGC
GCTATTAGAA ATTAA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCATCAGTTA TCAAACAAGC AAGTTAAGAA AAAAAATGGC AACCTTAAAA TTTCTTTTAG TTGTCATTCT TTGTCTTGCA TTTGCCTTCG GGCTTGCTAA TTCACAAGGC TTGCAAGTAG
GGTTTTACAA GAAAACATGT CCAAATGTAG AAGCAATTGT CAAAAAGGCA ACAACTGACT TTGTTTCTCG TGCTCCTACT TTGGCTGCCC CATTATTGAG AATGCATTTT CATGATTGTT
TTGTTAGGGG ATGTGATGGT TCAGTGCTAC TGAATTCAAC AAAAGGTAAT CAAGCAGAGA AAGATGCAAT TCCAAATCAA AGCCTGAGGG GATTCCAAGT GATTGATGCT GCTAAATCTG
CTTTAGAAAA ACAGTGTCCT GGCATTGTGT CTTGCACTGA TATTTTAGCC TTAGTAGCTC GTGATGCTGT TTCACTGATT AATGGACCAA CTTGGCAAGT AGAGTTGGGA AGAAGAGATG
GGAGAGTTTC AATTCTCTCA GAGGCCATAA GAAACCTGCC AACTCCTTTT GACAACTTTA CTACTCTAAA ATCATCATTT GGCGCTTTGG GCCTAAGTGT AAAAGACCTT GTTGTTCTAT
CAGGTGGACA TACTCTTGGG GTATCACATT GTTTTTCCTT CGGAAGTCGT TTGTACAATT TCACTGGTAA AGGTGATACA GACCCAAACA TGGATCAGAA CTACATAGGT CAATTGAAGA
CCAAATGCAA GCCAAATGAT GTGACCACTA CTGTTGAAAT GGACCCTGGA AGTGCCAAGA ATTTTGACAC AGATTATTAC ACTATGGTTA GCAAAAGAAG AGGGTTGTTC GCATCTGATG
CAGCTCTTCT CACAAATACT CAAACAAAAG CTTATGTCTT GTCCCAATTA AATACCCCTG GATCAACTTT CTTCGAGGAT TTTGGAGTAT CAATGGTGAA TATGGGCAAA ATTGGGGTCC
TTACTGGGAA AGCAGGTGAA ATCAGAAAAC ATTGCGCTAT TAGAAATTAA TTAGAGGAAT TTTAATAAGC TATTTCCCTT GCAGAATTTT AGCTTTCGTA TCGTTTTGTT CAATGGGAAC
TTTACGTGCA ATTAGTAATT TCTTCTTATT TTATTGTATG TTTTTTACTT TAGTTTGTTA AGCATGTAAT TACTACATTA ATAAAAGTGT TGT
|
Retrieve as FASTA
|
|