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Entry information : LePrx68 (Solyc02g084800.2.1[2.3])
Entry ID 8347
Creation 2011-04-27 (Christophe Dunand)
Last sequence changes 2014-08-26 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-26 (Christophe Dunand)
Peroxidase information: LePrx68 (Solyc02g084800.2.1[2.3])
Name (synonym) LePrx68 (Solyc02g084800.2.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx68
start..stop		 S start..stop
StPrx12 666 0 1..332 1..332
StPrx10 629 0 1..332 1..332
LePrx70 626 0 1..332 1..332
LePrx24 625 0 1..332 1..332
Literature and cross-references LePrx68 (Solyc02g084800.2.1[2.3])
DNA ref. GenBank:   BABP01007245.1 (250..1945)
EST ref. GenBank:   FS185438.1 [5' end]
Protein sequence: LePrx68 (Solyc02g084800.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (310)
PWM (Da):   %s   36319.56 (33917.3) Transmb domain:   %s   i7-29o
PI (pH):   %s   9.65 (9.76) Peptide Signal:   %s   cut: 23 range:23-332
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAQSTSFFVL VTLLVFAPIC FSFKSDNANL YPQYYYKSCP KAQEIVKSVV AKAVAKEARM AASLLRLHFH DCFVKGCDAS LLLDSRGSIV TEKRSNPNRN SARGFDVIDD IKSALEKECP  QTVSCADILA LAARDSTVLA GGPNWEVPLG RRDSRSASLS GSNNDIPAPN NTFNTILTKF KRQGLDLVDL VALSGSHTIG NSRCVSFRQR LYNQSGNSKP DTTLDESYAA QLRSRCPKSG 
GDQNLFFLDF VSPTKFDNSY FKLLLASKGL LNSDQVLTTK SQASLALVKQ YAENNALFFD HFAKSMVKMG NISPLTGSRG EIRKTCRKIN SS 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, 3 introns). Short PS part is missing due to "n" in the 5', completed with 1 EST
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCAGT CTACGAGCTT CTTCGTTCTC GTAACTCTTC TTGTTTTTGC ACCAATTTGT TTCTCTTTTA AGAGTGACAA TGCTAACTTA TACCCCCAAT ACTATTATAA ATCATGCCCA  AAAGCACAAG AAATTGTCAA GTCTGTTGTT GCCAAGGCTG TTGCCAAAGA AGCCCGAATG GCTGCTTCTT TGTTGAGGCT CCATTTCCAT GACTGCTTTG TCAAGGTAAA CTATCTCTCT  GTTAATATTT GATCACTTTG TATTATAACA ATGCACACTA GTACACAACT GAAATTACTT TTGCTACGAA CAAATATGTG CCATAAAAAA TTGATAGCTA ATCATTTTTT TTTACTATGC  CAATGTAGGG GTGTGATGCA TCTTTGCTTC TGGATAGCAG GGGAAGCATA GTAACTGAGA AGAGATCAAA CCCCAACAGG AACTCGGCTC GTGGATTTGA TGTCATTGAT GATATTAAAT  CTGCACTGGA GAAAGAATGC CCACAAACTG TCTCTTGTGC TGATATCTTG GCACTTGCTG CAAGGGACTC CACTGTTTTA GTAAGTAGAT CCATAAGAAG TGGATAACAG TATTTCCTAG  GAGGCGCGAG AATAAATAGA AACAGAACTA ATTTTCATTT GTTTTTAGGC TGGTGGACCA AACTGGGAGG TTCCATTGGG AAGAAGAGAC TCTAGAAGTG CCAGTTTAAG TGGCTCCAAC  AATGACATTC CTGCTCCAAA CAACACATTT AACACCATTC TCACTAAATT CAAGAGGCAG GGGCTTGATC TTGTTGACCT TGTCGCGTTA TCTGGTAAAA ACTACTCCCT TTAATTTCTT  GTTACTACAT AGTTATTCTG ACATACTTGA AATCTTAGTT AACATCAATG TATTCATGTT ATGCAGGGAG CCACACAATT GGAAATTCAA GATGTGTCAG CTTCAGGCAA AGGCTCTACA  ACCAGTCAGG AAACAGTAAA CCAGACACTA CTCTGGATGA ATCATATGCT GCCCAATTGC GCAGTAGGTG CCCAAAATCT GGTGGTGACC AAAACTTATT CTTCTTGGAC TTTGTTTCCC  CAACAAAATT TGATAACAGC TACTTCAAGC TCTTGTTGGC TTCAAAGGGT CTGCTCAACT CTGACCAAGT TCTTACTACT AAGAGTCAAG CATCATTAGC CTTGGTGAAG CAATATGCAG  AGAACAATGC ACTTTTCTTC GACCACTTCG CCAAGTCTAT GGTTAAGATG GGAAACATTT CTCCTTTGAC AGGTTCCAGA GGAGAAATCA GGAAGACATG CAGGAAGATC AACTCGTCTT 
AA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCAGT CTACGAGCTT CTTCGTTCTC GTAACTCTTC TTGTTTTTGC ACCAATTTGT TTCTCTTTTA AGAGTGACAA TGCTAACTTA TACCCCCAAT ACTATTATAA ATCATGCCCA  AAAGCACAAG AAATTGTCAA GTCTGTTGTT GCCAAGGCTG TTGCCAAAGA AGCCCGAATG GCTGCTTCTT TGTTGAGGCT CCATTTCCAT GACTGCTTTG TCAAGGGGTG TGATGCATCT  TTGCTTCTGG ATAGCAGGGG AAGCATAGTA ACTGAGAAGA GATCAAACCC CAACAGGAAC TCGGCTCGTG GATTTGATGT CATTGATGAT ATTAAATCTG CACTGGAGAA AGAATGCCCA  CAAACTGTCT CTTGTGCTGA TATCTTGGCA CTTGCTGCAA GGGACTCCAC TGTTTTAGCT GGTGGACCAA ACTGGGAGGT TCCATTGGGA AGAAGAGACT CTAGAAGTGC CAGTTTAAGT  GGCTCCAACA ATGACATTCC TGCTCCAAAC AACACATTTA ACACCATTCT CACTAAATTC AAGAGGCAGG GGCTTGATCT TGTTGACCTT GTCGCGTTAT CTGGGAGCCA CACAATTGGA  AATTCAAGAT GTGTCAGCTT CAGGCAAAGG CTCTACAACC AGTCAGGAAA CAGTAAACCA GACACTACTC TGGATGAATC ATATGCTGCC CAATTGCGCA GTAGGTGCCC AAAATCTGGT  GGTGACCAAA ACTTATTCTT CTTGGACTTT GTTTCCCCAA CAAAATTTGA TAACAGCTAC TTCAAGCTCT TGTTGGCTTC AAAGGGTCTG CTCAACTCTG ACCAAGTTCT TACTACTAAG  AGTCAAGCAT CATTAGCCTT GGTGAAGCAA TATGCAGAGA ACAATGCACT TTTCTTCGAC CACTTCGCCA AGTCTATGGT TAAGATGGGA AACATTTCTC CTTTGACAGG TTCCAGAGGA 
GAAATCAGGA AGACATGCAG GAAGATCAAC TCGTCTTAA 

Retrieve as FASTA