Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
310 (290) |
PWM (Da): |
34195.55 (31862.4) |
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PI (pH): |
9.54 (9.56) |
Peptide Signal: |
cut: 21 range:21-310 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MRAIAAWFFIFCYLVPSVFAQLRHGFYEGTCPPAESIVGRVVFNH WDRNRTVTAALLRMQFHDCVVKGCDASLLIDPTTERPSEKSVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNPSDVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGH TVGVAHCSLFQDRIKDPKMDSKLRAKLKKSCRGPNDPSVFMDQNTPFRVDNEIYRQMIQQRAILRIDDNLIRDGSTRSIVSDFAYNNKLFKESFAEAMQKMGEIGVLTGDSGEIRTNCRA FNN* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 1, intron 1), 2 cDNA and 6 ESTs (5 from roots only). |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGATCTCTAT TCTACATACA TTTTGTTGGA ACTATGATCA AATCTCGCTT CTGCGTATTC GTCTTTTTCT TAACCGTTTT TAAATAATCG ACCGAAGATT TCCGCTATTA TTTCATTTCT
GTTTTTACAT TTGGCCAGTG TGTTGCATTT TGTACTTATG TGATTCTTCT TCTTATTCTA TTGTGTGTAT TTTTTATATG TACATTTGTT CGTTGCTTTT TTTATTATGC AATTCCTGAT
GGTGATAGCT TTTAGATTTA ACAATATGGT CTCTGATCAT AAGATTAGAT AATGTGTATA TATATAGGGA TTGATACCAA AATCTTAAGA TTTTGCAACA AAAATTATGA GGCTACAACC
ATTGTTTCAA GGGTATTATC ATTATCTATA TTTCAAAAAC TTCAAAATTA AGTCCATTAT TTTTCTACTG TTTATCTTAC ACTGTTTATG TGGCAAATAC TATAATACCC CTATATTATA
TTACTAATCT TATTCGATAT TACTGTACAT GCGAAGATTA CGACAATGGT AGATTTTGTT CAAATTCAAA TTTGTTGACA ATCAAATTAT CGAATTAACT AATATTTTAT CTAGAGATAG
TGATAATAAT AATCTTATTG GATAAAATTC ATACTTTTCA CGTTGTAACA ACTCGTTAAT TTTTTATATG ATATAATAAA TGAGTTCAGA CGGTAAATAT AAATATATCA CATAACTTAT
AACTTATCAC AATACAAAAT GACTTAGCAT GATATAATTA TAAACTTCTT GATATAAATT TTTTTTATCA TGTTAACCTA ATAAATATTA CCGAGATATT TGTTATCATG TTATCCTGAT
AATACGTTAT CTGCTAACTA TTCTGATGCA TGTATTTTTT TACATGATTA TTCGGTCACA AGTCAACTTT TTTGCTATTC ATGCTAAATA TTTTGTTACT TTTTAATAAT AGTGTTATTG
TGTTCGCATA TATATCAGTC TTTAAAATCT AATCATTGGT
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAGGGCAATCGCAGCTTGGTTTTTCATTTTCTGTTACCTTGTTCCCTCTGTTTTTGCGCAGCTCCGGCATGGGTTTTACGAGGGTACATGCCCTCCCGCTGAATCTATCGTGGGTAGA GTTGTTTTCAACCATTGGGACCGTAACCGAACGGTTACTGCAGCATTGCTTCGTATGCAGTTTCATGATTGTGTTGTCAAAGTTAGTAACCTAGCTTCTCCTTGTGTGTTTTTATATGTA TCATGTATGTATGGTATATCGTAAACTAGCTAATATTTTGAATTCTTGTGTAGGGGGTTGTGATGCTTCCCTCTTGATCGACCCAACAACCGAAAGACCATCAGAGAAAAGCGTCGGGCG AAATGCAGGGGTGAGAGGTTTCGAGATCATAGATGAAGCTAAGAAAGAACTCGAGCTTGTTTGCCCGAAAACAGTCTCTTGCGCAGACATTGTAACTATAGCCACCAGAGACTCGATTGC ATTAGCGGGTGGTCCAAAGTTCAAAGTACGAACAGGAAGACGCGATGGATTAAGATCAAACCCTAGTGATGTTAAATTGCTAGGACCAACAGTTTCCGTGGCTACATCAATCAAAGCATT TAAATCTATAGGTTTTAATGTAAGCACCATGGTTGCACTTATTGGTGGTGGCCACACTGTCGGTGTTGCACATTGTAGTCTTTTTCAGGATAGGATTAAGGATCCTAAAATGGACAGCAA ACTGAGAGCTAAGTTAAAGAAGTCATGTCGTGGCCCGAACGACCCATCAGTGTTCATGGACCAAAATACGCCATTTAGAGTAGACAATGAAATCTATAGACAGATGATACAGCAACGAGC AATCCTTAGAATTGATGACAACTTGATTCGCGATGGATCAACCAGGTCGATTGTGTCAGATTTTGCATACAACAATAAATTATTCAAAGAGAGTTTTGCCGAAGCGATGCAGAAAATGGG TGAAATAGGAGTTCTTACGGGAGATTCTGGAGAGATCAGGACAAACTGCAGAGCCTTCAACAACTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAGGGCAATCGCAGCTTGGTTTTTCATTTTCTGTTACCTTGTTCCCTCTGTTTTTGCGCAGCTCCGGCATGGGTTTTACGAGGGTACATGCCCTCCCGCTGAATCTATCGTGGGTAGA GTTGTTTTCAACCATTGGGACCGTAACCGAACGGTTACTGCAGCATTGCTTCGTATGCAGTTTCATGATTGTGTTGTCAAAGGTTGTGATGCTTCCCTCTTGATCGACCCAACAACCGAA AGACCATCAGAGAAAAGCGTCGGGCGAAATGCAGGGGTGAGAGGTTTCGAGATCATAGATGAAGCTAAGAAAGAACTCGAGCTTGTTTGCCCGAAAACAGTCTCTTGCGCAGACATTGTA ACTATAGCCACCAGAGACTCGATTGCATTAGCGGGTGGTCCAAAGTTCAAAGTACGAACAGGAAGACGCGATGGATTAAGATCAAACCCTAGTGATGTTAAATTGCTAGGACCAACAGTT TCCGTGGCTACATCAATCAAAGCATTTAAATCTATAGGTTTTAATGTAAGCACCATGGTTGCACTTATTGGTGGTGGCCACACTGTCGGTGTTGCACATTGTAGTCTTTTTCAGGATAGG ATTAAGGATCCTAAAATGGACAGCAAACTGAGAGCTAAGTTAAAGAAGTCATGTCGTGGCCCGAACGACCCATCAGTGTTCATGGACCAAAATACGCCATTTAGAGTAGACAATGAAATC TATAGACAGATGATACAGCAACGAGCAATCCTTAGAATTGATGACAACTTGATTCGCGATGGATCAACCAGGTCGATTGTGTCAGATTTTGCATACAACAATAAATTATTCAAAGAGAGT TTTGCCGAAGCGATGCAGAAAATGGGTGAAATAGGAGTTCTTACGGGAGATTCTGGAGAGATCAGGACAAACTGCAGAGCCTTCAACAACTGA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CCATTTCATC ACCAAAACTT AAAACTAAAC ACAATCCAAA AGTATTTTTA AGCTTTCACA TACGAGAGAA AACTTAGAAA ATGAGGGCAA TCGCAGCTTG GTTTTTCATT TTCTGTTACC
TTGTTCCCTC TGTTTTTGCG CAGCTCCGGC ATGGGTTTTA CGAGGGTACA TGCCCTCCCG CTGAATCTAT CGTGGGTAGA GTTGTTTTCA ACCATTGGGA CCGTAACCGA ACGGTTACTG
CAGCATTGCT TCGTATGCAG TTTCATGATT GTGTTGTCAA AGGTTGTGAT GCTTCCCTCT TGATCGACCC AACAACCGAA AGACCATCAG AGAAAAGCGT CGGGCGAAAT GCAGGGGTGA
GAGGTTTCGA GATCATAGAT GAAGCTAAGA AAGAACTCGA GCTTGTTTGC CCGAAAACAG TCTCTTGCGC AGACATTGTA ACTATAGCCA CCAGAGACTC GATTGCATTA GCGGGTGGTC
CAAAGTTCAA AGTACGAACA GGAAGACGCG ATGGATTAAG ATCAAACCCT AGTGATGTTA AATTGCTAGG ACCAACAGTT TCCGTGGCTA CATCAATCAA AGCATTTAAA TCTATAGGTT
TTAATGTAAG CACCATGGTT GCACTTATTG GTGGTGGCCA CACTGTCGGT GTTGCACATT GTAGTCTTTT TCAGGATAGG ATTAAGGATC CTAAAATGGA CAGCAAACTG AGAGCTAAGT
TAAAGAAGTC ATGTCGTGGC CCGAACGACC CATCAGTGTT CATGGACCAA AATACGCCAT TTAGAGTAGA CAATGAAATC TATAGACAGA TGATACAGCA ACGAGCAATC CTTAGAATTG
ATGACAACTT GATTCGCGAT GGATCAACCA GGTCGATTGT GTCAGATTTT GCATACAACA ATAAATTATT CAAAGAGAGT TTTGCCGAAG CGATGCAGAA AATGGGTGAA ATAGGAGTTC
TTACGGGAGA TTCTGGAGAG ATCAGGACAA ACTGCAGAGC CTTCAACAAC TGAAGATCTC TATTCTACAT ACATTTTGTT GGAACTATGA TCAAATCTCG CTTCTGCGTA TTCGTCTTTT
TCTTAACCGT TTTTAAATAA TCGACCGAAG ATTTCCGCTA TTATTTCATT TCTGTTTTTA CATTTGGCCA GTGTGTTGCA TTTTGTACTT ATGTGATTCT TCTTCTTATT CTATTGTGTG
TATTTTTT
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Retrieve as FASTA
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