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Entry information : MtPrx107 (Medtr3g105790.1[4.0] / Medtr3g105790.1[3.5] / x)
Entry ID 8464
Creation 2011-08-10 (Qiang Li)
Last sequence changes 2012-01-04 (Qiang Li)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-05-20 (Catherine Mathe)
Peroxidase information: MtPrx107 (Medtr3g105790.1[4.0] / Medtr3g105790.1[3.5] / x)
Name (synonym) MtPrx107 (Medtr3g105790.1[4.0] / Medtr3g105790.1[3.5] / x)
Class Class III peroxidase    [Orthogroup: Prx026]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MtPrx107
start..stop		 S start..stop
MtPrx114 666 0 1..324 1..324
GmPrx151 514 0 1..322 1..325
GmPrx295 496 1.14e-178 1..322 1..329
GmPrx67 488 2.27e-175 1..322 1..328
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8464' 'complement(join(48800474..48800892,48801518..48801683,48801776..48801955,48802876..48803085))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 48802876..48803085 208 N° 2 48801776..48801955 178 N° 3 48801518..48801683 164 N° 4 48800474..48800892 417
complement(join(48800474..48800892,48801518..48801683,48801776..48801955,4880287 6..48803085))


exon

Literature and cross-references MtPrx107 (Medtr3g105790.1[4.0] / Medtr3g105790.1[3.5] / x)
DNA ref. Phytozome 12:   chr3 (48803085..48800474)
Cluster/Prediction ref. Phytozome Gene 12:   31055370
Protein sequence: MtPrx107 (Medtr3g105790.1[4.0] / Medtr3g105790.1[3.5] / x)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (301)
PWM (Da):   %s   35427.56 (32924.3) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.57 (4.55) Peptide Signal:   %s   cut: 24 range:24-324
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
METTKSMFLFIAVSILFVSSVTANLAFDFYAASCPTAELFIRNAV
STSSSNDPSIPGKLLRMVFHDCFVEGCDASLMLQGNNTEQSDPGNRSVGGFSVIETAKRVLEMFCPGTVSCADIIALAARDAVEIAGGPRVQIPTGRRDGMVSIASNVRPNIVDTSFTMDEMLKLFSSKGLSLLDLVVLSGAHTI
GTAHCNTFRGRFQQDRNGSLRLIDQTIDTNYADQLIKQCPINAQPSVAVNIDPETSMLFDNQYYRNLLDRKVLFQSDSVLMNNDDTRKLVEDFANDQELFFDNWGVSFVKLTSIGVKTDE
EGEIRRSCAATNIV

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 3, 3 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGACAACAAAATCAATGTTTCTTTTCATAGCAGTTTCTATCTTGTTTGTTTCCTCTGTAACTGCTAATCTTGCTTTCGACTTCTATGCTGCTTCATGTCCAACAGCAGAGTTATTC
ATAAGAAATGCAGTCAGTACATCCTCTTCAAATGATCCTTCCATTCCTGGAAAGCTCCTTCGCATGGTTTTCCATGATTGCTTCGTAGAGGTTAGTATTCAAATGTTGCTCTTCACCAAG
CAAATGACATTCTGTGAGAGTTTATAGAAACAAGTTATGCCATGTGCATAAGCTCTCTTAAATAGCTTATAAAAACGGTTTGACTTTATTTATCTTTTTATAAAGATAGCTTATACAATT
GCACTTATACGATACTCCCTCCGTCCCATAATATAAACAAAAAAAACGCAATTTCTTTGTCCCAAAATATAAGAAGAAAAAAAAAACAAACTTTTATCTTTTTCAAGATTTTTTTTTTTG
TTTATTCTCATAAAAGTAAATGCAAATTACATTCAATTTTCTCTCTCTTTCATTTTTTTCTATGACGAATAGATAAAAATTTGTGATATAAGCGCTTAATTAAATTGTTTGGATCCAAAC
AAGACTACTTGATGTGAGATTCAAATTGGTTTTATCTTGATAGATCTTTGTTATTTCCTCCGAATCAGTCCATGCATCACATGTTTTGATTCTAAGTGTTGGGTTGTTTTGACTTTTGAG
AGTTTCATATTGACTAGAGATATGACTTAGATAGTGCTTGTTAGGTTTGAGCAGTCCGGATCCAACAAGTCATTTTGTAGGATTTTGTCACACTCAATGTCAGAATTCTAAGATTTGAAG
TTCTGATGACCTTAGAGGTTGCATGCAATAGTGAGCTATGAACCACTAATACGATGTGTCGAGTGTCCAATACGTGTCGGTCTTTGACACTGACACGACATGCATGTGGATACACTCAAT
CACTTCAATTTTCTCAAATTATCAACTTCAGTGTCATGTTTGTTGCATCTATGTTAGTGCTTTATAGATAGTGAGGTATCATAATCGGGTACTCTGCACTTTATTTTTTACATTGGTTTA
TCAATTATGATTGTCTCCTTGATGCAATAAGATTATTATTTGAAATGCAGGGGGATGTGATGCATCTTTGATGCTACAAGGGAATAATACAGAACAAAGTGATCCAGGAAACAGATCTGT
TGGTGGATTTTCTGTTATAGAAACAGCGAAAAGAGTTCTTGAGATGTTCTGCCCAGGAACTGTTTCTTGTGCAGACATAATTGCTCTAGCAGCTAGAGATGCAGTTGAAATTGTAAGTTC
TCCATTGCACTTCTTATACTATCCTTCAATCAGAAATAGACATGTCTTTTTGGTACTGTTGTTGAAAGACACTTTGTGAAACAGGCGCTGGTGGACCAAGGGTTCAGATTCCTACAGGTA
GGAGAGATGGAATGGTTTCAATTGCTTCAAATGTTAGACCCAACATTGTGGACACTAGTTTTACTATGGACGAGATGCTTAAGCTCTTTTCCAGTAAAGGATTGTCCTTACTTGATCTTG
TGGTTCTTTCAGGTTCATAATATAAACCCAAATCTATATCTATATTATTTACATTTTAGAATTTACCAAGACTTGAACATAGTACTAGTATTTTTTTTTTTTATTTCAAGTAAAATTCCA
TAAAGTAACACATTTTGGTCGGTAGAAATAATTAAACTATAGATGCTTTGTAGATGATATCATCTAATCAAATTTGTTATAATTGCCATCTTGACATGTTGAGAGTACTACGTTGGATAG
TAATATGATCTGAACGATGATTATAGTTGAAGGCAACCGTCATTCCATGTAGTAGTTTTTGAGGTTGAACAAAGAATTATAATTCTGATATGGTAAACAAAGTATAGCCTATTGAGCCAT
CCACATATATCTAGTAGTTTATACACTCCAGATGTCTAGTCTCTGGCTTGAGGAATGTGTTGAGAGTCCTTCAAGCCGGTTTTTTGAATATTTTGAGTCCGGTCCAATTTTTAAAACATT
AGTTGGCCTATTTCTCTTTCTAACTTTTGGGTATTCAAACCAAGTGTATTAGACAAAAATATCTCATGCTTTATTTGATTGTCTGCTTCTTCTCACTATATTTACTTTAATATCTAACTA
GTGTTACATATTTAGTACTAATTGTTAAGCTTTGCAGGGGGGCTCATACAATAGGAACAGCTCATTGCAATACATTCAGGGGTCGTTTCCAACAAGACAGAAATGGAAGTCTTAGGCTCA
TTGACCAAACCATTGATACTAATTATGCTGATCAGCTAATAAAACAGTGTCCAATAAATGCACAACCATCCGTGGCAGTGAACATCGATCCTGAAACATCTATGCTATTTGACAACCAAT
ACTACAGAAATCTTCTTGATCGCAAAGTTCTGTTCCAGTCTGATTCGGTTTTGATGAACAATGATGACACGAGGAAACTAGTGGAGGATTTTGCAAATGATCAAGAACTTTTCTTTGACA
ATTGGGGTGTGTCGTTCGTAAAGCTAACCAGTATTGGGGTAAAAACTGACGAGGAGGGTGAAATTCGACGTTCTTGTGCTGCAACTAATATTGTATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGACAACAAAATCAATGTTTCTTTTCATAGCAGTTTCTATCTTGTTTGTTTCCTCTGTAACTGCTAATCTTGCTTTCGACTTCTATGCTGCTTCATGTCCAACAGCAGAGTTATTC
ATAAGAAATGCAGTCAGTACATCCTCTTCAAATGATCCTTCCATTCCTGGAAAGCTCCTTCGCATGGTTTTCCATGATTGCTTCGTAGAGGGATGTGATGCATCTTTGATGCTACAAGGG
AATAATACAGAACAAAGTGATCCAGGAAACAGATCTGTTGGTGGATTTTCTGTTATAGAAACAGCGAAAAGAGTTCTTGAGATGTTCTGCCCAGGAACTGTTTCTTGTGCAGACATAATT
GCTCTAGCAGCTAGAGATGCAGTTGAAATTGCTGGTGGACCAAGGGTTCAGATTCCTACAGGTAGGAGAGATGGAATGGTTTCAATTGCTTCAAATGTTAGACCCAACATTGTGGACACT
AGTTTTACTATGGACGAGATGCTTAAGCTCTTTTCCAGTAAAGGATTGTCCTTACTTGATCTTGTGGTTCTTTCAGGGGCTCATACAATAGGAACAGCTCATTGCAATACATTCAGGGGT
CGTTTCCAACAAGACAGAAATGGAAGTCTTAGGCTCATTGACCAAACCATTGATACTAATTATGCTGATCAGCTAATAAAACAGTGTCCAATAAATGCACAACCATCCGTGGCAGTGAAC
ATCGATCCTGAAACATCTATGCTATTTGACAACCAATACTACAGAAATCTTCTTGATCGCAAAGTTCTGTTCCAGTCTGATTCGGTTTTGATGAACAATGATGACACGAGGAAACTAGTG
GAGGATTTTGCAAATGATCAAGAACTTTTCTTTGACAATTGGGGTGTGTCGTTCGTAAAGCTAACCAGTATTGGGGTAAAAACTGACGAGGAGGGTGAAATTCGACGTTCTTGTGCTGCA
ACTAATATTGTATAA

Retrieve as FASTA