View Redoxidase 8481

Entry information : MpiCIIAC[P]02

Entry ID	8481
Creation	2011-08-24 (Christophe Dunand)
Last sequence changes	2012-05-22 (Christophe Dunand)
Sequence status	theoretical translation / pseudogene
Reviewer	Not yet reviewed
Last annotation changes	2012-03-22 (Christophe Dunand)

Peroxidase information: MpiCIIAC[P]02

Name

MpiCIIAC[P]02

Class

Asco Class II type C [Orthogroup: CIIAC001]*

Taxonomy

Eukaryota Fungi Ascomycota Dothideomycetes Mycosphaerellaceae Mycosphaerella

Organism

Mycosphaerella pini (Dothistroma septosporum ) [TaxId: 64363 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	MpiCIIAC[P]02 start..stop	S start..stop
ZcelCIIAC03	366	2.74e-126	46..320	133..405
CzmCIIAC01	339	3.19e-117	53..320	29..295
SpopCIIAC	313	2.28e-106	20..319	25..330
MpopCIIAC	308	2.51e-104	17..319	39..346

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8481' 'complement(join(882484..883444))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	882484..883444	959
complement(join(882484..883444))

Literature and cross-references MpiCIIAC[P]02

DNA ref.	JGI genome: scaffold_2 (883444..882484)
mRNA ref.	JGI transcript: isotig11079

Protein sequence: MpiCIIAC[P]02

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	320 (353)
PWM (Da):	33237.49 (37617.6)
PI (pH):	7.62 (4.58)	Peptide Signal:	cut: 0 range:Ymax-352

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

SKTSSTGSSS TKTISSSTTT TVSSSITTTS SSTTTTTSAS LTSTGCRDFW SNVVDGLAPL MRVNGQRTDM ARAAIRFAFH DSAAYSAKLH FQAPAAGGAD GPLLLSSTVI NRANNNGLSD YHGQLTK*FS DYKALGYGLI AADLIRVAGS LGVLAWPGGR IRRVLVGRSD TNVSAPDGLM PKDFGTGSDH DTLLQLFxID KGFTAQDLAA LIGAHTTSMA NFETQNGIPA GTPQDSAPGQ
WDVLYYNQTM FPPAGIGSFD RDVNLSKDQT STGVGRQFRS FVGNQGAWGA SFASAWQVLT LLGVPSDATA IMRDCTVVVS A

Retrieve as FASTA

Remarks

Pseudogen (stop codon in frame). Uncorrect prediction from JGI (short sequence). EST????

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

AGCAAGACTT CATCCACGGG TTCTTCGAGC ACAAAGACCA TTTCAAGCTC AACAACGACC ACAGTGTCAT CGTCAATTAC CACGACTTCC TCGTCGACCA CAACGACCAC CTCTGCTTCA CTAACATCCA CAGGGTGTCG GGATTTCTGG TCCAATGTCG TGGACGGTTT GGCACCACTA ATGCGAGTCA ACGGCCAACG TACCGACATG GCCCGAGCAG CAATCCGTTT TGCGTTCCAC GACTCTGCTG CCTACTCTGC CAAGCTCCAC TTCCAAGCTC CGGCAGCAGG TGGCGCCGAC GGTCCTCTAC TCCTCTCAAG CACCGTAATC AATCGTGCAA ATAACAACGG CCTAAGTGAC TACCATGGCC AACTCACCAA GTAGTTCTCC GACTACAAAG CCCTCGGCTA TGGTCTTATC GCCGCGGATC TAATCCGAGT CGCTGGCAGT CTCGGCGTCC TCGCATGGCC TGGAGGCCGC ATTAGAAGAG TTTTAGTCGG TCGCTCCGAC ACGAACGTCT CAGCACCCGA TGGTCTGATG CCGAAAGATT TCGGCACAGG TTCCGATCAC GACACTCTCC TCCAACTGTT TCnnATCGAC AAGGGATTCA CAGCGCAAGA TCTCGCCGCT CTGATTGGAG CGCACACGAC CTCAATGGCA AACTTTGAAA CGCAGAATGG TATTCCTGCC GGTACGCCGC AAGATAGTGC GCCGGGACAG TGGGATGTCC TTTATTACAA TCAGACCATG TTCCCGCCAG CGGGAATTGG CAGTTTCGAC CGTGATGTCA ATCTTAGTAA GGACCAGACT TCAACAGGTG TTGGGAGGCA GTTTAGGAGC TTCGTGGGGA ATCAGGGTGC TTGGGGCGCG AGTTTTGCGA GTGCATGGCA GGTGTTGACG TTGCTTGGGG TACCGAGTGA TGCGACTGCG ATCATGAGAG ATTGTACTGT GGTCGTCAGC
GCT

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA