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Entry information : PcMnP03_RP78
Entry ID 8527
Creation 2011-09-22 (Christophe Dunand)
Last sequence changes 2011-09-22 (Christophe Dunand)
Sequence status complete
Reviewer Nizar Fawal
Last annotation changes 2012-03-28 (Catherine Mathe (Scipio))
Peroxidase information: PcMnP03_RP78
Name PcMnP03_RP78
Class Manganese peroxidase    [Orthogroup: MnP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete
Organism Phanerochaete chrysosporium    [TaxId: 5306 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcMnP03_RP78
start..stop		 S start..stop
PcMnP03_OGC101 767 0 1..382 1..382
PcMnP03_ATCC24725 733 0 1..382 1..380
PgigMnP05 644 0 1..382 1..381
PcMnP02_OGC101 644 0 1..382 1..382
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8527' 'join(2814195..2814326,2814378..2814456,2814508..2814547,2814609..2814786,2814845..2815066,2815117..2815531,2815591..2815673)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2814195..2814326 130 N° 2 2814378..2814456 77 N° 3 2814508..2814547 38 N° 4 2814609..2814786 176
N° 5 2814845..2815066 220 N° 6 2815117..2815531 413 N° 7 2815591..2815673 81  
join(2814195..2814326,2814378..2814456,2814508..2814547,2814609..2814786,2814845 ..2815066,2815117..2815531,2815591..2815673)


exon

Literature and cross-references PcMnP03_RP78
DNA ref. JGI genome:   scaffold_1 (2814195..2815673)
Protein sequence: PcMnP03_RP78
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   382 (298)
PWM (Da):   %s   39795.65 (32128.1)  
PI (pH):   %s   4.16 (8.39) Peptide Signal:   %s   cut: 26 range:26-323
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFPSSLLALVALAAVTSAAPATTQATCPDGTKVNNAACCAFIPLAQDLQETIFQNDCGEDAHEVIRLTFHDAIAISQSKGPSAGGGADGSMLLFPTIEPNFSANNGIDDSVNNLIPFMQKHDTISAGDIVQFAGAVALTNCGAPQLEFLAGRPNKTIPAIDGL
IPEPQDSVTSILERFKDAGNFSPFEVVSLLASHSVARADKVDETIDAAPFDTTPFVFDTQIFLEVLLKGVGFPGTANNTGEVASPLPLTSGSDTGELRLQSDFALARDERTACIWQGFVN
EQALMAASFKAAMAKLAVLGHDRNTLIDCSDVVPAPKPAVNKPASFPATTGPQDLELSCNTKPFPSLSVDAGAQQTLIPHCSDGDMTCQSVQFNGPA

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTTTCCATCCTCACTCCTCGCTCTGGTGGCTCTTGCTGCAGTTACATCTGCCGCGCCGGCCACGACCCAGGCCACTTGCCCCGACGGTACCAAGGTCAACAACGCTGCCTGCTGC
GCTTTCATACCTCTGTAAGCGGCCTTTCACTCGTCGAAAATGATCTTTACTTATCATTTCTACAGCTTGCACAGGATCTTCAGGAGACTATCTTCCAGAACGACTGCGGTGAAGACGCGC
ATGAAGTTATTCGCCTTACTTTCCCCGTAAGCCGAACGCAAATTGCGCAAATGCCATGCTAATATTTTCCCTTGTAGACGACGCTATTGCCATTTCGCAAAGCAAGGGACCGAGCGCGCG
TAAGCTTATGCCCGATCTTGCGAGGCATTTCGAGTTCTGACTGGGGTTTCCCTTGACCAGTGGCGGCGGAGCTGACGGCTCCATGCTGCTGTTCCCCACCATTGAGCCCAACTTCTCTGC
CAACAACGGTATCGATGACTCGGTCAACAATCTCATCCCGTTCATGCAAAAGCACGACACCATCAGCGCTGGCGACATCGTCCAGTTCGCCGGCGCCGTCGCGCTCACCAACTGTCCTCT
GTACGTCCCTCTCACTCCGACTTCATCGGCGTAAGTCTGACGAATGATATGTATGTAGGGTGCGCCGCAGCTCGAGTTCCTTGCGGGACGCCCGAATAAGACAATCCCTGCCATTGATGG
CCTCATTCCCGAGCCGCAGGACAGCGTGACGTCGATCCTGGAGCGCTTCAAGGACGCAGGCAACTTCAGCCCGTTTGAGGTGGTCTCGCTGCTCGCGTCCCACTCTGTTGCGCGCGCAGA
CAAGGTAGACGAGACCATCGACGCCGCGCCATTCGATACGCGGTGAGAGCCGCCCGCATACTGCCGCTCTGCGTGCGCTGACTCTCGCGCAGACGCCGTTCGTGTTCGACACGCAGATCT
TCCTCGAGGTGCTCCTCAAGGGCGTCGGCTTCCCGGGGACGGCGAACAACACGGGCGAGGTCGCGTCGCCGCTGCCGCTGACGTCGGGCAGCGACACGGGCGAGCTGCGGCTGCAGTCCG
ACTTTGCGCTCGCGCGCGACGAGCGGACGGCGTGCATCTGGCAGGGCTTCGTCAACGAGCAGGCGCTCATGGCCGCGAGCTTCAAGGCCGCCATGGCGAAGCTCGCCGTGCTCGGGCACG
ACCGCAACACGCTCATCGACTGCAGCGACGTCGTGCCCGCGCCGAAGCCCGCCGTGAACAAGCCCGCGAGCTTCCCCGCCACCACGGGCCCCCAGGACCTCGAGCTCTCGTGCAACACGA
AGCCGTTCCCGTCGCTCTCTGTTGATGTGGTGTGTCTGACCTTCCTCTGGTGGTGTTGTCGGCCGGCTGATGGGTTTTGCTTTTCCAGCGGGCGCGCAGCAGACGCTTATCCCGCACTGC
TCCGACGGCGACATGACGTGCCAGAGCGTCCAGTTCAACGGCCCTGCATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTTTCCATCCTCACTCCTCGCTCTGGTGGCTCTTGCTGCAGTTACATCTGCCGCGCCGGCCACGACCCAGGCCACTTGCCCCGACGGTACCAAGGTCAACAACGCTGCCTGCTGC
GCTTTCATACCTCTTGCACAGGATCTTCAGGAGACTATCTTCCAGAACGACTGCGGTGAAGACGCGCATGAAGTTATTCGCCTTACTTTCCACGACGCTATTGCCATTTCGCAAAGCAAG
GGACCGAGCGCTGGCGGCGGAGCTGACGGCTCCATGCTGCTGTTCCCCACCATTGAGCCCAACTTCTCTGCCAACAACGGTATCGATGACTCGGTCAACAATCTCATCCCGTTCATGCAA
AAGCACGACACCATCAGCGCTGGCGACATCGTCCAGTTCGCCGGCGCCGTCGCGCTCACCAACTGTCCTGGTGCGCCGCAGCTCGAGTTCCTTGCGGGACGCCCGAATAAGACAATCCCT
GCCATTGATGGCCTCATTCCCGAGCCGCAGGACAGCGTGACGTCGATCCTGGAGCGCTTCAAGGACGCAGGCAACTTCAGCCCGTTTGAGGTGGTCTCGCTGCTCGCGTCCCACTCTGTT
GCGCGCGCAGACAAGGTAGACGAGACCATCGACGCCGCGCCATTCGATACGACGCCGTTCGTGTTCGACACGCAGATCTTCCTCGAGGTGCTCCTCAAGGGCGTCGGCTTCCCGGGGACG
GCGAACAACACGGGCGAGGTCGCGTCGCCGCTGCCGCTGACGTCGGGCAGCGACACGGGCGAGCTGCGGCTGCAGTCCGACTTTGCGCTCGCGCGCGACGAGCGGACGGCGTGCATCTGG
CAGGGCTTCGTCAACGAGCAGGCGCTCATGGCCGCGAGCTTCAAGGCCGCCATGGCGAAGCTCGCCGTGCTCGGGCACGACCGCAACACGCTCATCGACTGCAGCGACGTCGTGCCCGCG
CCGAAGCCCGCCGTGAACAAGCCCGCGAGCTTCCCCGCCACCACGGGCCCCCAGGACCTCGAGCTCTCGTGCAACACGAAGCCGTTCCCGTCGCTCTCTGTTGATGCGGGCGCGCAGCAG
ACGCTTATCCCGCACTGCTCCGACGGCGACATGACGTGCCAGAGCGTCCAGTTCAACGGCCCTGCATAA

Retrieve as FASTA