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Entry information : TvCIIBB10 (MnP9-short)
Entry ID 8536
Creation 2011-09-23 (Christophe Dunand)
Last sequence changes 2011-09-23 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2017-09-08 (Catherine Mathe)
Peroxidase information: TvCIIBB10 (MnP9-short)
Name (synonym) TvCIIBB10 (MnP9-short)
Class Other class II peroxidase type B    [Orthogroup: CIIBB001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Coriolaceae Trametes
Organism Trametes versicolor (Coriolus versicolor )    [TaxId: 5325 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TvCIIBB10
start..stop		 S start..stop
TvCIIBB09 635 0 52..404 12..364
TvCIIBB06 634 0 50..404 10..364
TvCIIBB06_Gangwondo 630 0 50..404 10..364
TvCIIBB05_KN9522 626 0 50..404 10..364
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2309224..2309404 179 N° 2 2309464..2309803 338 N° 3 2309863..2310063 199 N° 4 2310120..2310361 240
N° 5 2310426..2310663 236 N° 6 2310719..2310731 11  
join(2309224..2309404,2309464..2309803,2309863..2310063,2310120..2310361,2310426 ..2310663,2310719..2310731)


exon

Literature and cross-references TvCIIBB10 (MnP9-short)
DNA ref. JGI genome:   scaffold_10 (2309224..2310731)
Protein sequence: TvCIIBB10 (MnP9-short)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   404 (363)
PWM (Da):   %s   42895.68 (37693.3)  
PI (pH):   %s   5.38 (4.20) Peptide Signal:   %s   cut: 19 range:19-381
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRLPQVQLYVDKDRVHIKATTKPQKALRPSSSLPPSCKTSGNGFQ
APRILRVLAALQVTNGALTRKVTCAGGQVTANAACCALFPVLEDIQTNLFDGGECGEEVHESLRLTFHDAIGISPAISRTGKFGGGGADGSIAIFADIETNFHANNGVDEIIGEQAPFIARHNLTTADFIQFAGA
IGVSNCPGAPRLDVFIGRKDATQPAPDLTVPEPFDDVTKILERFFDAGKFTPAEVVALLASHTIAAADHVDPTIPGTPFDSTPELFDTQFFIETQLRGTLFPGNGSNQGEVMSPLHGELR
LQSDAELARDIRTSCEWQSFNNQAKLQSAFKAAFAKMTVLGQNTRNLIDCSDVVPTPPPAASKAHFPAGLTHRDVEQACFFAPFPTLPTDPGPATSVAPVPPS

Retrieve as FASTA  
Remarks Complete sequence from genomic. 5' end doesn't match with other sequences. Frameshit needed to have correct protein (start at 2309348 and framshift after 10AA) but not confirmed with SRA data
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGTCTGCCACAGGTTCAGCTCTACGTGGATAAAGACCGAGTGCATATAAAGGCGACCACGAAACCTCAGAAAGCCCTCAGGCCATCGAGCTCTCTTCCCCCATCCTGCAAAACCTCG
GGTAATGGCTTTCAGGCTCCTCGCATCCTTCGTGTCCTCGCGGCTCTCCAGGTCACCAACGCGGTACGACGTTCCACCCCGCACGCAGACCACCCACTAACACGCACCGTTTCTCCGGCC
AGGTGCGCTCACCCGCAAGGTGACGTGCGCGGGCGGCCAGGTCACCGCGAACGCGGCGTGCTGCGCGCTCTTCCCCGTCCTCGAGGACATCCAGACGAACCTCTTCGACGGCGGCGAGTG
CGGCGAGGAGGTGCACGAGTCCCTCCGGCTTACCTTCCACGACGCCATCGGCATCTCCCCAGCTATCTCGCGCACCGGCAAGTTCGGAGGTGGGGGCGCGGACGGTTCCATTGCCATCTT
CGCGGATATCGAGACGAACTTCCACGCGAACAATGGGGTGGACGAGATTATTGGGGAGCAGGCGCCGTTCATCGCGCGCCATAACCTCACCACGGCCGACTTTTGTACGTGGTCTGTTTT
TTGCGTCGCGGTAGGGTCGCGTGTGGTTAACCGGAGAGTGCAGCATCCAGTTTGCTGGGGCGATTGGGGTGAGCAACTGCCCTGGCGCGCCCCGCCTGGACGTCTTCATTGGCCGCAAGG
ACGCCACCCAGCCCGCGCCCGACCTGACGGTCCCTGAGCCGTTCGACGATGTCACCAAGATCCTCGAGCGCTTTTTCGACGCCGGCAAGTTCACACCCGCCGAGGTCGTCGCTCTGCTCG
CCTCTCGTATGTCTTCAGTGCTCTCATCTCAGGTCGAGATCACGCTCACGCGCGCCTCGCAGGCACACGATCGCCGCTGCTGACCACGTCGACCCGACCATCCCCGGCACGCCATTCGAC
TCGACGCCCGAGTTGTTCGACACGCAGTTCTTCATCGAGACGCAGCTCCGCGGCACGCTCTTCCCGGGCAACGGGAGCAACCAGGGGGAGGTGATGTCGCCGCTGCACGGCGAGCTCCGT
CTCCAGTCCGACGCGGAGCTCGCGCGCGACATCCGCACCTCGTGCGAGTGGCAGTCTTTCGTCACAGTGCGTATGCCTTCCCTTCCTCTTTTCTCTGCGGAGTGCTCACCGCGCGCTCGC
GCATTTGCAGACAACCAGGCGAAGCTCCAGTCCGCGTTCAAGGCGGCGTTCGCGAAAATGACCGTGCTGGGCCAGAATACGCGCAATCTGATTGACTGCTCGGACGTCGTGCCGACCCCG
CCGCCGGCCGCGAGTAAGGCGCACTTCCCGGCTGGGCTCACGCACCGGGACGTTGAGCAGGCGTGCTTCTTTGCGCCGTTCCCGACTCTCCCGACTGACCCCGGACCGGCTACGTCCGTC
GCTCCCGTGTGTAGGTTTTTTGTGATTCCTGAACGGCACGCATACGCTGACGCGTCTACTTTCAGCCCCCCATCCTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGTCTGCCACAGGTTCAGCTCTACGTGGATAAAGACCGAGTGCATATAAAGGCGACCACGAAACCTCAGAAAGCCCTCAGGCCATCGAGCTCTCTTCCCCCATCCTGCAAAACCTCG
GGTAATGGCTTTCAGGCTCCTCGCATCCTTCGTGTCCTCGCGGCTCTCCAGGTCACCAACGGTGCGCTCACCCGCAAGGTGACGTGCGCGGGCGGCCAGGTCACCGCGAACGCGGCGTGC
TGCGCGCTCTTCCCCGTCCTCGAGGACATCCAGACGAACCTCTTCGACGGCGGCGAGTGCGGCGAGGAGGTGCACGAGTCCCTCCGGCTTACCTTCCACGACGCCATCGGCATCTCCCCA
GCTATCTCGCGCACCGGCAAGTTCGGAGGTGGGGGCGCGGACGGTTCCATTGCCATCTTCGCGGATATCGAGACGAACTTCCACGCGAACAATGGGGTGGACGAGATTATTGGGGAGCAG
GCGCCGTTCATCGCGCGCCATAACCTCACCACGGCCGACTTCATCCAGTTTGCTGGGGCGATTGGGGTGAGCAACTGCCCTGGCGCGCCCCGCCTGGACGTCTTCATTGGCCGCAAGGAC
GCCACCCAGCCCGCGCCCGACCTGACGGTCCCTGAGCCGTTCGACGATGTCACCAAGATCCTCGAGCGCTTTTTCGACGCCGGCAAGTTCACACCCGCCGAGGTCGTCGCTCTGCTCGCC
TCGCACACGATCGCCGCTGCTGACCACGTCGACCCGACCATCCCCGGCACGCCATTCGACTCGACGCCCGAGTTGTTCGACACGCAGTTCTTCATCGAGACGCAGCTCCGCGGCACGCTC
TTCCCGGGCAACGGGAGCAACCAGGGGGAGGTGATGTCGCCGCTGCACGGCGAGCTCCGTCTCCAGTCCGACGCGGAGCTCGCGCGCGACATCCGCACCTCGTGCGAGTGGCAGTCTTTC
GTCAACAACCAGGCGAAGCTCCAGTCCGCGTTCAAGGCGGCGTTCGCGAAAATGACCGTGCTGGGCCAGAATACGCGCAATCTGATTGACTGCTCGGACGTCGTGCCGACCCCGCCGCCG
GCCGCGAGTAAGGCGCACTTCCCGGCTGGGCTCACGCACCGGGACGTTGAGCAGGCGTGCTTCTTTGCGCCGTTCCCGACTCTCCCGACTGACCCCGGACCGGCTACGTCCGTCGCTCCC
GTCCCCCCATCCTAA

Retrieve as FASTA