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Entry information : VcaAPx01 (105827)
Entry ID 8560
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-09-27 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-11-29 (Qiang Li)
Peroxidase information: VcaAPx01 (105827)
Name (synonym) VcaAPx01 (105827)
Class Ascorbate peroxidase    [Orthogroup: APx2004]
Taxonomy Eukaryota Viridiplantae Chlorophyta Chlorophyceae Volvocaceae Volvox
Organism Volvox carteri    [TaxId: 3067 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VcaAPx01
start..stop		 S start..stop
CreAPx01 393 2.4e-137 3..360 2..347
OCgAPx01 246 1.49e-80 77..351 1..270
AacAPx01 179 1e-54 74..296 28..245
MenAPx03 148 1.24e-42 111..351 34..258
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 798960..799107 146 N° 2 799440..799600 159 N° 3 800189..800301 111 N° 4 800613..800673 59
N° 5 801149..801232 82 N° 6 801565..801750 184 N° 7 802116..802343 226 N° 8 802774..802875 100
join(798960..799107,799440..799600,800189..800301,800613..800673,801149..801232, 801565..801750,802116..802343,802774..802875)


exon

Literature and cross-references VcaAPx01 (105827)
DNA ref. Phytozome 12:   scaffold_34 (798960..802875)
Protein sequence: VcaAPx01 (105827)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   360
PWM (Da):   %s   37736.93 Transmb domain:   %s   i5-27o
PI (pH):   %s   9.54
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRHVAFKSAGSHRRCAAPAKAGSSRARAAVVVCSLAREQVLGRRQLLGTGAVVLAAGTTPLLIPQPVVAGPLPQALVPVDQLGLLQKQAQLKDFRLRAEAAIKEVLGAADASACMRLVLH
DAATYDAATKTGGLDGSIVLPEELSRPENAGLDVIVDKLAQAKAKIDAGGAEDGSGPISWADLIVLAAKVTTQAQWASIKRSRAQIASGGDVIAGPAFGAAWPVRLGRTDSTVPGPAGRI
PSADASVGDIKSFMEKLGVAPGSNVGSGLFSAKPPFWERPTLVLWTAAAADPAAEEERFVAQDPAAFKGYKQNYDRSRKTVTRTDYEVDFIDYFTLLTNLGASFKKDAYLHPEAVVAVKF
*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGGCACGTAGCGTTCAAATCTGCGGGGTCTCATCGTCGGTGTGCTGCTCCTGCAAAGGCTGGCAGCAGCCGTGCTCGTGCGGCAGTGGTGGTTTGCAGCCTCGCACGCGAACAGGTC
CTTGGCAGGCGTCAACTCCTGGGCACAGAGGTGACAACCTATGATGCTTTCGTGGTTGCTTCCTAAAATTGCGATAGATCCTTATGGTGCAATGCTCCTCGGCTTGCGAGATGCCAGCAA
TTGTCGCTGTCCTACACTTTCATGATCAGTTGGCGTTTGAAAGCCACAGAAATTTTGCGCGTTACCTTTACAGGCGGCTTTAGTCACGTTGTGATTTCCTTGAATTTGTCTTTATTTGGG
AGATTGTTTGTGGCTGGATGGCGCAGCATCCCCAACCTAACGCTCCAATCGCAACAACTGACGCCAACCGCCCAAACGGTCCTCTTGGCCCTCTTCTCCCGTCTTCGCCCCATGTGCACC
AGGCGCTGTTGTTCTGGCTGCCGGTACAACTCCGCTCCTGATTCCTCAGCCCGTTGTCGCGGGTCCGCTGCCACAGGCGCTTGTGCCGGTGGACCAGCTTGGGCTGCTGCAGAAGCAGGC
CCAACTCAAAGACTTCCGCTTGCGGGCTGAGGCCGCGATCAAGAGGTTAGATCAAATTCGGCATGCATCTCTCCATAGTTGCAATCAATCACAGCATCCTTTTCATGGCGACGGTCTTTC
TTTAATGTTGAAGAGCAGTGTTAGTGGAACACTTGATCGCCTGCAACTTGACGGTTTGGGTTTTCGGCTCGCGTTCTCAATCACACTCCAAGTTTGGCATCGCTGGCCCCGCCCACCGGC
TTTTACACTCCTGCTCGGGGTACAATGTGGTAAAGGCGCCTGTCAATGATGGAAGTGTTAAAATAACAGGGACAGAAGAATGCCCGCAGACGCAAGCACATGTTTAATGCATACTCAACA
TTTCCGCACCTAGTTGACATCTTGGGTTGCCACATATTACCCTTGCCCCGGTACCCGTGTCAGTTCATGCTGTCTGCCCCGCAGGGTATCTCCTCAAATCTCACTTGAGACTCACAAAAT
CCGGACACTCCCTAAACCCAGGGAGTTGCCCACATCTTTTTGCACACTGTGCACCGGAAAAGCTATGGATGTTGCCTTTTTCGCTGTTTTCCATGCGGCAAACATCCTGATTGTGCATTA
ATGACCTTCCTCGAAACGAACCGATCCTTGCAGGAGGTACTGGGTGCAGCTGATGCGTCGGCATGTATGCGCCTCGTATTGCACGACGCTGCCACGTATGATGCGGCAACTAAGACTGGT
GGCCTGGACGGCTCGATTGTGCTGCCCCGTAAGTGTCATACGTGGCCACCAGCTATGTTTGAGCAGCCGTGCTTTTGCACTGAGAACATGCGCACATTCGCTGCGCCTTTCGAATGCAAT
TGCTGTCACAAGGAGAGATGGAAAGGGTGGCTTTGGTCCATCTATCCTCGGAATATCGGTTGTGCGTTGGCTTTGCGAGGCTCTTAGGTGCTGCAACGAAATTTCCCCTGTTTTAATCCC
AACTGCAGTTACGTTCGCATTCGTTTAATGTTTCAGTTCGTTCGCCTCAATTCTCCCGGACTTGCGTGTTCATGAACCTCGCCTTGGCTTCCATTTCAGGGAGGAGCTGTCTCGCCCGGA
GAACGCTGGGCTGGATGTGATTGTGGACAAGCTGGCGCAGAGGTAGGATGGGCGACCGGGCTGCTTGCTTTGACTGGCCTAGTTGTTGCCAGTAGAGCTCGTGCTGATCACGTGCTCTTC
CTGGCAAATGAGATTTGGGGACAGCCGACTCGACCTAAACTACAGGAGCTCACACTACATGCATTTTTTCTTGACCCCATAAAGCCTTGAGGCCACGAAGAGGCTATGAAATCAGGCGCT
GGGCAATGTCTGATATTGGTGGTGACGTAGGTCTTATATATTGTTGGCAAGGAGCTGAGGGGCAGACAATTCCGGCGGAAATGCTCATCGACGATGTTCAGGAAACCTCCTTGCGTCACC
ATGAAAACTACCCATATCCCAGCCCTCACACGCGCATGCAATACTCCTGCGTCTCCTGTTAGCCCGTGTAATTTGAATGTACCATGGCTGAAGAGTGCTCTGCACTTGTGCAACGTCACC
CTTCAATGGCCCCAACAACCGTACTGTACTGCCGCAGGCCAAGGCGAAGATTGACGCTGGGGGTGCTGAGGACGGCTCCGGACCCATCAGCTGGGCTGATCTGATTGTGCTGGCGGCCAA
GAGGTAGGTGTTGTCATTGTGTGGAAGGATGGGAATTCGTGCAACAGCCAAAAAAAGCTGCGTCCCGCAAGAGTTCAGCATCAGGGAATTGCAGGTGGGCGGTTGAAGTATGAAAACTTA
GGACCAAGATGAGTGAAACAGCCCTTGATGGCGCATGAGACGTGTCCTGAAAGGGGCTAACAAGGACTCGCTGGCGCACTTGATGATGAGATGGATGTGCAACCTACTCAGTCTATGCAG
TGCATACGCAGTTCCAAGTTCCACACTACAGCAGGGCGCATCCACACTCCGTAATCCTCCTTACACCCTCGAAATCCATGCCTCTACCTCAACAGGTGACCACCCAGGCACAGTGGGCCT
CAATCAAGCGCTCCCGCGCCCAGATTGCCAGCGGTGGTGACGTCATCGCTGGGCCCGCATTTGGCGCCGCGTGGCCGGTGCGCCTGGGTCGCACGGATTCCACTGTACCGGGCCCCGCGG
GCCGCATCCCGTCCGCGGACGCGTCCGTGGGTGATATCAAGAGGTACAGAAACAATTGAGATTTGCTGCCCTCCTAGCGCATTTCGTGGAATTTAACCCTGACCCTGTCTGGCTCTGGCT
TGGCTCAGTTACCTGTTTGCGGCTGACACAGCCGGTTGGCAGGACCCAATTCATCTGCGGCTCATCCAGAAGGATGTCTATTCACTGCATCACCAACGAACGCCTCTCGCGCGCGCATTC
ATTTAAGACTATCGGATATAGCTTGATTGAGATAACGTAAGCCATCTGATAAGAATAAGAGAGGCCGTTCTGGCTGGACATAGCAGTAACCTCAGCCCGTCCAAACTGATTTTACTTGGC
CGGACATGTCATCAATCCAATCTGCCCTAAATCCATTCCATATGCCAGAGCTTTATGGAGAAGCTTGGTGTGGCGCCAGGCTCCAATGTGGGCAGCGGTCTCTTCTCCGCCAAGCCGCCG
TTCTGGGAGCGTCCCACGCTGGTGTTGTGGACTGCTGCTGCCGCCGACCCGGCGGCTGAGGAGGAGCGCTTCGTTGCACAGGACCCGGCGGCGTTCAAGGGCTATAAGCAGAACTACGAC
CGCTCGCGGAAGACAGTTACGCGGACGGACTACGAGAGGTAATTGCTGGTGCAGGGGGACTTGGCTGTCGGTATGTGAGATGGATATTATGGGCATGATTATCGTAGCCGTGTGGCAATG
CTGGCATGCCGCACCGTCTGCAGCAATCAACTGGGCAGACAGCAGCGAAGAGATAAGATGGAAAGCAGTCGGGCGTTCGACAGTGCAGCTGGATTGGTCGGTGTGGGTTGCAGAATGCGT
AGCCGTCGTCGTTTCATGAATTAGGCCAAAGGTTTTCGGCAGGTGACCTCGTGCGGCATGATCATTCCACAGTGTACCCCGACGGCGACGGTGGCGAATGCTGACAGCCTGGTATCTGGC
CGTTGCACCCGTTGATGGCTTTGGACGCATCCCCATTGGCTTGTCGCACATGCATGTTGCCAGGATATTTTCCGGTAATGTATTTCGCCCTGTTGCTTACGTTTGTAGGTTGATTTCATC
GACTACTTCACGCTGCTGACCAACTTGGGAGCCTCTTTCAAGAAGGATGCTTACTTGCACCCGGAGGCTGTGGTGGCCGTGAAGTTCTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGGCACGTAGCGTTCAAATCTGCGGGGTCTCATCGTCGGTGTGCTGCTCCTGCAAAGGCTGGCAGCAGCCGTGCTCGTGCGGCAGTGGTGGTTTGCAGCCTCGCACGCGAACAGGTC
CTTGGCAGGCGTCAACTCCTGGGCACAGGCGCTGTTGTTCTGGCTGCCGGTACAACTCCGCTCCTGATTCCTCAGCCCGTTGTCGCGGGTCCGCTGCCACAGGCGCTTGTGCCGGTGGAC
CAGCTTGGGCTGCTGCAGAAGCAGGCCCAACTCAAAGACTTCCGCTTGCGGGCTGAGGCCGCGATCAAGGAGGTACTGGGTGCAGCTGATGCGTCGGCATGTATGCGCCTCGTATTGCAC
GACGCTGCCACGTATGATGCGGCAACTAAGACTGGTGGCCTGGACGGCTCGATTGTGCTGCCGGAGGAGCTGTCTCGCCCGGAGAACGCTGGGCTGGATGTGATTGTGGACAAGCTGGCG
CAGGCCAAGGCGAAGATTGACGCTGGGGGTGCTGAGGACGGCTCCGGACCCATCAGCTGGGCTGATCTGATTGTGCTGGCGGCCAAGGTGACCACCCAGGCACAGTGGGCCTCAATCAAG
CGCTCCCGCGCCCAGATTGCCAGCGGTGGTGACGTCATCGCTGGGCCCGCATTTGGCGCCGCGTGGCCGGTGCGCCTGGGTCGCACGGATTCCACTGTACCGGGCCCCGCGGGCCGCATC
CCGTCCGCGGACGCGTCCGTGGGTGATATCAAGAGCTTTATGGAGAAGCTTGGTGTGGCGCCAGGCTCCAATGTGGGCAGCGGTCTCTTCTCCGCCAAGCCGCCGTTCTGGGAGCGTCCC
ACGCTGGTGTTGTGGACTGCTGCTGCCGCCGACCCGGCGGCTGAGGAGGAGCGCTTCGTTGCACAGGACCCGGCGGCGTTCAAGGGCTATAAGCAGAACTACGACCGCTCGCGGAAGACA
GTTACGCGGACGGACTACGAGGTTGATTTCATCGACTACTTCACGCTGCTGACCAACTTGGGAGCCTCTTTCAAGAAGGATGCTTACTTGCACCCGGAGGCTGTGGTGGCCGTGAAGTTC
TAA

Retrieve as FASTA