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Entry information : AcoPrx87 (AcoGoldSmith_v1.024753m)
Entry ID 8632
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-12-14 (Qiang Li)
Peroxidase information: AcoPrx87 (AcoGoldSmith_v1.024753m)
Name (synonym) AcoPrx87 (AcoGoldSmith_v1.024753m)
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Ranunculaceae Aquilegia
Organism Aquilegia coerulea     [TaxId: 218851 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AcoPrx87
start..stop		 S start..stop
AcoPrx86 331 2.34e-116 4..171 5..172
AcoPrx28 301 1.42e-104 4..171 5..171
AcoPrx30 258 1.12e-87 4..171 5..170
AfpPrx03 257 4.16e-87 4..171 5..170
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 936417..936425 7 N° 2 935705..935905 199 N° 3 935097..935291 193 N° 4 934867..934974 106
complement(join(934867..934974,935097..935291,935705..935905,936417..936425))


exon

Literature and cross-references AcoPrx87 (AcoGoldSmith_v1.024753m)
DNA ref. Phytozome 12:   scaffold_47 (936425..934867)
Protein sequence: AcoPrx87 (AcoGoldSmith_v1.024753m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   171 (148)
PWM (Da):   %s   18352.44 (15973.1)  
PI (pH):   %s   7.18 (6.50) Peptide Signal:   %s   cut: 24 range:24-171
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MALSCFVKIILCVLGFLIGSTVADLKMGFYDKNCPNAEKIVLAYV
KKHISNVPSLAAPLLRMAFHDCFVRGCDASLLLNATLNNQVAEKDARPNLSLRGFDFINEVKSLLEAECPGIVSCADIISLVARDSIVAMGGPYWKVPTERRDGTISKASEALSNLPGANENFNAL

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (3' end is missing which has been completed).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCCTGGTACACATTTAGTTTGTTTGTCCAACTAAGCAATTAATAATTTAATCTTAACTTAATGTGTTAATTGAGATTTTTAAAGGCTTTTTTTTTTTAGCATAGTCAAGGGATAAG
GATTTAATATGAACCAAAAGCCATGTAGATTCATTACATTACCATGAATCCATATAATAAACTGAAAATGTGTGGTTGCAAATAGGCACATAGCTATTGTTGTAAAAAAACAACATTCAA
ATACTATTTTTCAGATCTTCCATTACTTGTTTTGTCTAGGACTCTAAGGGTGAAGCCAAACTGATTAGCAACCTAGGAACAAATTAAAAAATAAATAGATAATTAGTAGTACATCAGCAC
ATATGTTGATTATATTGGTATGTTTAATGATTTTGATCACAAGTTTTCTTCTCAAAACTTCTATATAAAGCAAACTTACTTTAAGCTAAGTACCAACAAACTAAGTATACATTAAGGAAG
TTCACAAGTCTTAACATATCGTATCATAATGGGAAAGAAGAGAGTTGTTTTGTGAAAATAATTTTGTGTGTTCTGGGTTTTTTAATTGGTTCAACAGTTGCTGATTTGAAAATGGGGTTT
TATGATAAAAATTGCCCAAATGCTGAAAAGATTGTGTTGGCCTACGTAAAGAAGCATATTTCAAATGTCCCAAGTTTGGCTGCACCGTTACTTAGAATGGCCTTCCATGACTGCTTTGTG
AGGGTTAGTATATGTTTCTCTTTATACTGGGTATTTGAGACATGGAATTACCGACCAGATAATATATTGTTTTCTTCTCTTTTCTCTTTTACGAGCTTTTCGTAAAATCTTAGGTTATAT
ATTTTCTTTTATTTGTTTAAAAGAAGAGAATTATATCTTGTGTTTTGAATATATAAGACTAGCCTTTATAACTGAAAATTATGCGATTGCATCATTGTTGTGTTATTAGTTATGATTAAG
AAGCATATACATATAACTTGATCTCAACTTATGGGTAAAAAAAACATCTTTTTGGATTTACCGGTCTTGTAATGGATTGTGTCTATTTGGGTAATATATTTGCTCTTCATTTATGCTTTG
TTTTCATTCTATAAATGTATGATATTTCGTAAAAAACAAATTCTTGTTAAATGTAGGGGGTTGCGATGCCTCACTTCTCCTGAACGCTACTTTAAACAACCAAGTTGCAGAGAAGGATGC
TCGTCCAAATCTATCCCTTCGAGGATTTGATTTCATCAATGAAGTGAAGAGTTTATTAGAAGCTGAATGTCCAGGGATTGTTTCGTGTGCAGATATTATCTCTTTGGTTGCAAGAGATTC
AATTGTCGCTATGGTAAGGATAATTAATCTAGTGAACNNNNNNNNNNNNNNNNNNNNTAGTTTTATCTCTCATTACTTCAATAAATCTATAGCAAAATAAAATTTTAAACATGCATTGTG
AAACTAAATCAATAGGGGGAGGTCCATATTGGAAAGTCCCAACGGAGCGTAGAGATGGGACTATATCAAAAGCCTCAGAAGCCTTGAGCAATCTCCCTGGAGCAAATGAAAACTTCAATG
CCCTC

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCCTGAGTTGTTTTGTGAAAATAATTTTGTGTGTTCTGGGTTTTTTAATTGGTTCAACAGTTGCTGATTTGAAAATGGGGTTTTATGATAAAAATTGCCCAAATGCTGAAAAGATT
GTGTTGGCCTACGTAAAGAAGCATATTTCAAATGTCCCAAGTTTGGCTGCACCGTTACTTAGAATGGCCTTCCATGACTGCTTTGTGAGGGGTTGCGATGCCTCACTTCTCCTGAACGCT
ACTTTAAACAACCAAGTTGCAGAGAAGGATGCTCGTCCAAATCTATCCCTTCGAGGATTTGATTTCATCAATGAAGTGAAGAGTTTATTAGAAGCTGAATGTCCAGGGATTGTTTCGTGT
GCAGATATTATCTCTTTGGTTGCAAGAGATTCAATTGTCGCTATGGGAGGTCCATATTGGAAAGTCCCAACGGAGCGTAGAGATGGGACTATATCAAAAGCCTCAGAAGCCTTGAGCAAT
CTCCCTGGAGCAAATGAAAACTTCAATGCCCTC

Retrieve as FASTA