Entry information : AcoPrx[P]78 (AcoGoldSmith_v1.021992m)
Entry ID 8645
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-12-14 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2011-07-03 (Qiang Li)
Peroxidase information: AcoPrx[P]78 (AcoGoldSmith_v1.021992m)
Name (synonym) AcoPrx[P]78 (AcoGoldSmith_v1.021992m)
Class Class III peroxidase     [Orthogroup: Prx027]*
Taxonomy Eukaryota Viridiplantae Streptophyta Ranunculaceae Aquilegia
Organism Aquilegia coerulea     [TaxId: 218851 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AcoPrx[P]78
start..stop
S start..stop
AfpPrx04 225 1.02e-73 1..194 169..365
AcoPrx09 225 1.28e-73 1..194 169..365
AfpPrx02 207 2.95e-67 1..192 120..311
AcoPrx05 207 1.57e-66 1..192 174..365
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8645' 'join(1667183..1667348,1667891..1668306)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1667183..1667348 164 N° 2 1667891..1668306 414  
join(1667183..1667348,1667891..1668306)


exon

Literature and cross-references AcoPrx[P]78 (AcoGoldSmith_v1.021992m)
DNA ref. Phytozome 12:   scaffold_20 (1667183..1668306)
Protein sequence: AcoPrx[P]78 (AcoGoldSmith_v1.021992m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   189 (154)
PWM (Da):   %s   21424.86 (17103.8) Transmb domain:   %s   i12-34o
PI (pH):   %s   9.8 (9.10) Peptide Signal:   %s   cut: 24 range:24-177
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
SGGPYYHLTTGRRDSLASFADIVASEVTSPQDDLSKTLTSYASKG
FDERETVSLL
GAYSIGVAHCHFFRSHL*LFSDWLT*PFSGT*ISSSDEVKMSCMR*QQESHRGFRDEYGL*RRNRTRVWYKILRVQGKDILHADQQLMVGEQTASWVKTYASDKSLFRRDFAQVMMKLSS
LRVLTKPLGQIRLNCLRV

Retrieve as FASTA  
Remarks 5' end is missing. Stops in frame. Gaps in frame.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCTGGTGGTCCTTACTATCACCTGACCACTGGAAGGAGAGACAGTCTTGCATCTTTTGCTGATATCGTGGCTTCTGAGGTCACTTCTCCTCAGGATGATCTTTCCAAGACCCTTACATCC
TATGCTAGTAAAGGATTTGATGAAAGAGAGACTGTCAGTCTCTTAG
AGGTAAGCTGACTGTTCTATCTTCTATGAGCTTAATGAAATCATTAGATTTAATTTAGTATCTTATGTGTACAT
TCTGTTACTTTTAGTAACATGGGCTTCACTATTCAGCATTAAGCGAGATTATTGATCTTGTTTTCTGTTTTCGACAAAAGAAATCACTATTGTTATTATTTTGAAAAAGGGATTTATTAG
TCTTTTCAATCTGTAGTTGGATAAAAGTTGGTTTGCCTCAGGTTAAGGGTTTTTGACATTCTGTTTAATTTTTAGACTATAGCTATTTTTCCTTTTCTCTTAGTAAGTTGTTTACTCATT
GCTGTTGTCAATGGAGCTAAAAATGCGCATTCAACTAATTTGTCCTGTTCATTAGTTATAACTTATAATGTTGTTGACTCCGGAGTAAATGGATGTATCTGATAAAATTTAATTTTCTAA
TACATTTGGCAGTCTGGTCATTAAAACGAAGTTAATAAATACTGATCTTGTTGATGGACCTAAATTTACTTAAATGTGATTTTTGACAAACTGTAATTGGTGTTCATCAGGTGCTTACAG
TATAGGAGTAGCTCACTGCCACTTCTTCCGCAGCCACCTATGACTTTTCAGTGACTGGCTTACCTGACCCTTCTCTGGAACCTGAATTTCTTCATCTGATGAGGTCAAGATGTCATGTAT
GCGATGACAGCAAGAGTCACACAGAGGATTCAGGGATGAATATGGGCTATGACGGAGAAACAGGACCAGAGTTTGGTACAAAATACTACGGGTGCAAGGAAAGGATATTCTTCATGCTGA
TCAGCAGTTGATGGTTGGGGAACAAACTGCAAGCTGGGTCAAAACCTATGCGTCAGACAAATCATTGTTCCGCAGGGACTTTGCCCAAGTGATGATGAAGCTTTCAAGCCTTCGAGTCCT
GACAAAACCACTAGGACAGATAAGGCTCAATTGTTTGAGAGTTGCT

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCTGGTGGTCCTTACTATCACCTGACCACTGGAAGGAGAGACAGTCTTGCATCTTTTGCTGATATCGTGGCTTCTGAGGTCACTTCTCCTCAGGATGATCTTTCCAAGACCCTTACATCC
TATGCTAGTAAAGGATTTGATGAAAGAGAGACTGTCAGTCTCTTAG
GTGCTTACAGTATAGGAGTAGCTCACTGCCACTTCTTCCGCAGCCACCTATGACTTTTCAGTGACTGGCTTACC
TGACCCTTCTCTGGAACCTGAATTTCTTCATCTGATGAGGTCAAGATGTCATGTATGCGATGACAGCAAGAGTCACACAGAGGATTCAGGGATGAATATGGGCTATGACGGAGAAACAGG
ACCAGAGTTTGGTACAAAATACTACGGGTGCAAGGAAAGGATATTCTTCATGCTGATCAGCAGTTGATGGTTGGGGAACAAACTGCAAGCTGGGTCAAAACCTATGCGTCAGACAAATCA
TTGTTCCGCAGGGACTTTGCCCAAGTGATGATGAAGCTTTCAAGCCTTCGAGTCCTGACAAAACCACTAGGACAGATAAGGCTCAATTGTTTGAGAGTTGCT

Retrieve as FASTA