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Entry information : CclPrx21 ( clementine0.9_014719m)
Entry ID 8685
Creation 2011-06-25 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-14 (Christophe Dunand)
Peroxidase information: CclPrx21 ( clementine0.9_014719m)
Name (synonym) CclPrx21 ( clementine0.9_014719m)
Class Class III peroxidase    [Orthogroup: Prx039]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus clementina    [TaxId: 85681 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CclPrx21
start..stop		 S start..stop
CsPrx26 702 0 1..345 1..345
BrPrx09-1Aa_other 566 0 1..345 1..347
ThasPrx40 562 0 1..345 1..346
AtPrx09 556 0 1..345 1..346
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8685' 'join(1959393..1959659,1959803..1959994,1960093..1960258,1960343..1960755)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1959393..1959659 265 N° 2 1959803..1959994 190 N° 3 1960093..1960258 164 N° 4 1960343..1960755 411
join(1959393..1959659,1959803..1959994,1960093..1960258,1960343..1960755)


exon

Literature and cross-references CclPrx21 ( clementine0.9_014719m)
DNA ref. Phytozome 12:   scaffold_22 (1959393..1960755)
EST ref. GenBank:   DY277100.1 [Fragment]
Protein sequence: CclPrx21 ( clementine0.9_014719m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   345 (322)
PWM (Da):   %s   37280.15 (34809.6)  
PI (pH):   %s   7.98 (7.31) Peptide Signal:   %s   cut: 24 range:24-345
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFFKLAITLLLLALISARISLAHPGIGIGWGGNGQYGGSFYGLF
PQFYQFSCPQVDNIVMSVLQKAIARQPRIAASLLRLHFHDCFVQGCDASVLLDDSAAIVSEKNSVPNRNSLRGFEVIDEIKAKLEEACPQTVSCADIVALAARGSVVLSGGPSWELPLGRRDSRTASLSGSNSNIPPPNSTVQNLIASFKRQGLNEVDLVSLSG
GHTIGVARCVTFKQRLYNQNGNNQPDETLERTYYFGLKSVCPRTGGDNNISPLDFASPAKFDNTYFKLVLLGKGLLTSDEVLLTGDVGNIVQLVKSYAEDDELFFKQFAQSMVKMGNISP
LTGFNGEVRKNCRLVN

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 2 ESTS.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCTTCAAATTGGCTATCACTCTACTGCTACTAGCTTTGATCTCAGCCAGGATCTCACTAGCTCACCCTGGAATTGGCATTGGCTGGGGTGGTAATGGCCAGTATGGAGGCAGC
TTCTATGGCCTCTTTCCACAATTTTATCAGTTTTCATGCCCACAAGTTGATAACATTGTCATGTCAGTGCTCCAGAAGGCCATTGCAAGACAGCCCAGAATAGCTGCCTCTTTGCTTAGG
CTTCATTTCCATGATTGCTTTGTTCAGAGGTTTCTCACTTTTAGTATACCTAGTAGTACAAAACACTCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAGTGTAGTTAAC
TTCGTATGTATGCATAGGTGTTTATGACTTACAGTTTTATTACTAATTACAGGGCTGTGATGCTTCCGTCTTGTTGGACGATTCTGCAGCTATAGTTAGTGAAAAGAATTCAGTACCAAA
CAGGAATTCCCTCAGAGGATTTGAAGTGATTGACGAGATCAAGGCTAAGCTGGAAGAAGCATGTCCTCAGACTGTTTCTTGTGCAGACATTGTCGCCCTAGCTGCTCGCGGCTCCGTTGT
ACTATAGTAAGCAAAATTCTAACAAAACTGATGTTAGGTAGATCATATAAAAGATTCAGGACAGAGAACTTTGTTAATAACTATTACTGGGTATGCTCAAACAGAGCGGAGGACCGTCTT
GGGAGCTCCCCCTTGGAAGGAGGGACTCGAGAACAGCAAGCTTAAGTGGCTCAAACAGTAACATTCCCCCGCCAAACTCTACCGTCCAAAACCTTATAGCATCCTTCAAGCGTCAAGGCC
TAAATGAAGTAGACCTTGTCTCTCTTTCAGAGGTAATTAATTACTGTATAGCACTGCATTTAATGAACTGAACCTGATTCTCTAAACTAAGTATTTTGTTTGATGTCATGTTGCAGGAGG
GCATACAATTGGGGTGGCAAGGTGTGTGACCTTCAAGCAAAGGCTATATAATCAAAATGGAAACAACCAACCGGATGAGACTTTAGAGAGGACATATTACTTCGGTTTAAAATCAGTCTG
CCCAAGAACAGGCGGCGACAATAACATCTCCCCGCTAGACTTTGCCTCACCAGCAAAATTTGATAACACCTACTTCAAGCTTGTTCTGTTGGGCAAAGGGCTTCTCACATCTGATGAAGT
GCTTTTGACAGGCGATGTGGGGAACATCGTGCAACTAGTTAAGTCCTACGCTGAGGATGATGAGCTCTTCTTTAAACAGTTTGCTCAGTCAATGGTTAAGATGGGGAACATTAGCCCTCT
CACTGGCTTTAATGGTGAAGTTAGGAAGAATTGTCGCCTAGTTAATTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCTTCAAATTGGCTATCACTCTACTGCTACTAGCTTTGATCTCAGCCAGGATCTCACTAGCTCACCCTGGAATTGGCATTGGCTGGGGTGGTAATGGCCAGTATGGAGGCAGC
TTCTATGGCCTCTTTCCACAATTTTATCAGTTTTCATGCCCACAAGTTGATAACATTGTCATGTCAGTGCTCCAGAAGGCCATTGCAAGACAGCCCAGAATAGCTGCCTCTTTGCTTAGG
CTTCATTTCCATGATTGCTTTGTTCAGGGCTGTGATGCTTCCGTCTTGTTGGACGATTCTGCAGCTATAGTTAGTGAAAAGAATTCAGTACCAAACAGGAATTCCCTCAGAGGATTTGAA
GTGATTGACGAGATCAAGGCTAAGCTGGAAGAAGCATGTCCTCAGACTGTTTCTTGTGCAGACATTGTCGCCCTAGCTGCTCGCGGCTCCGTTGTACTAAGCGGAGGACCGTCTTGGGAG
CTCCCCCTTGGAAGGAGGGACTCGAGAACAGCAAGCTTAAGTGGCTCAAACAGTAACATTCCCCCGCCAAACTCTACCGTCCAAAACCTTATAGCATCCTTCAAGCGTCAAGGCCTAAAT
GAAGTAGACCTTGTCTCTCTTTCAGGAGGGCATACAATTGGGGTGGCAAGGTGTGTGACCTTCAAGCAAAGGCTATATAATCAAAATGGAAACAACCAACCGGATGAGACTTTAGAGAGG
ACATATTACTTCGGTTTAAAATCAGTCTGCCCAAGAACAGGCGGCGACAATAACATCTCCCCGCTAGACTTTGCCTCACCAGCAAAATTTGATAACACCTACTTCAAGCTTGTTCTGTTG
GGCAAAGGGCTTCTCACATCTGATGAAGTGCTTTTGACAGGCGATGTGGGGAACATCGTGCAACTAGTTAAGTCCTACGCTGAGGATGATGAGCTCTTCTTTAAACAGTTTGCTCAGTCA
ATGGTTAAGATGGGGAACATTAGCCCTCTCACTGGCTTTAATGGTGAAGTTAGGAAGAATTGTCGCCTAGTTAATTAA

Retrieve as FASTA