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Entry information : CpapPrx01 (evm.model.supercontig_1040.1)
Entry ID 8737
Creation 2011-06-28 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-03-05 (Qiang Li)
Peroxidase information: CpapPrx01 (evm.model.supercontig_1040.1)
Name (synonym) CpapPrx01 (evm.model.supercontig_1040.1)
Class Class III peroxidase    [Orthogroup: Prx034]
Taxonomy Eukaryota Viridiplantae Streptophyta Caricaceae Carica
Organism Carica papaya    [TaxId: 3649 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CpapPrx01
start..stop		 S start..stop
PpePrx77 501 2.5e-180 11..337 13..341
GrPrx02 499 1.08e-179 15..337 10..337
QrobPrx02 498 4.19e-179 27..337 23..335
ThasPrx46 492 1.23e-176 8..339 4..336
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8737' 'join(4515..4772,4878..5057,5418..5577,6471..6892)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4515..4772 256 N° 2 4878..5057 178 N° 3 5418..5577 158 N° 4 6471..6892 420
join(4515..4772,4878..5057,5418..5577,6471..6892)


exon

Literature and cross-references CpapPrx01 (evm.model.supercontig_1040.1)
DNA ref. Phytozome 12:   supercontig_1040 (4515..6892)
Protein sequence: CpapPrx01 (evm.model.supercontig_1040.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339 (310)
PWM (Da):   %s   37393.37 (34178.6)  
PI (pH):   %s   8.7 (8.70) Peptide Signal:   %s   cut: 30 range:30-339
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MEKRDQPAVTILPLLALAVLSFLPADVKAATSLPTPVKLQWHYYKVHNTCDDAEAYIQYQVKRFWQSDKSITPKLLRLLYSDCLVTGCDASILLDVPNSEKTAPQNIGLGGFVVIDKIKT
VLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGMKSMAASVDLPSPSISWEAALAYFTSKGLDILDLTTLLGAHSMGRTHCSHIVDRLYNFNNTGKPDRSIAASFLAELRKL
CPKTQKGQTDLLVFLNPESGSNYTFTSSYFSRVLSKKVVLGVDQQLLFGDITKEIVTELQGFEDFRKSFALSMSRMGNLNVLTGGKGQIRRDCRYINPN*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Two ESTs. lab_host="E. coli". tissue_type="leaf, root, stem, flower, fruit, and seed". Containing motif 'YSDC'.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAAAGAGATCAACCAGCAGTTACGATCCTTCCACTGTTGGCTCTTGCAGTATTAAGCTTCTTGCCGGCAGACGTGAAGGCCGCCACGTCGCTGCCGACACCTGTGAAGCTCCAA
TGGCATTACTACAAGGTCCACAATACATGTGATGATGCCGAAGCTTATATACAGTACCAAGTGAAAAGGTTTTGGCAGTCTGACAAGAGCATCACACCTAAGCTACTTCGCTTGCTCTAC
TCGGATTGTTTAGTAACCCCGTAAGTCTCTTTCTCTTGTTTTATTTTTGATACGAGACTTCATTTGCTTTCCTAATCTTCCTAATCAATCATGGATGGATCTAAATCATGGTCAACCAAA
TGTAGGGCTGTGATGCATCTATTCTACTAGACGTGCCTAACTCGGAGAAGACTGCACCACAGAACATAGGCCTTGGAGGGTTTGTGGTGATCGACAAGATCAAAACTGTTCTTGAGCAGC
GGTGTCCTGGAGTAGTTTCTTGCGCTGATATTCTAAATCTTGCCACTAGAGATGCTGTTCACTTGTGGTAAAAGCATCTCTTACATAATCTCCCATACGGACTTTTCATTATATTCTAAG
TGGTTATTGATAGAAACCTAGATAGTGTTTTGTTAGCATATAGTACCAGCACAGCTTGGTATAATACAAATTTATTATAGTTTTGTTCCCTACTATTTTTGGTAGCTTAAAATTTTGATA
TTGAACAATACCATAGATTTGTATGGTCTTACCGTAGATTTGTATGGTGTTGTAGAATAAAGCTACCAAATGCTGCCTGGTGTTTAAAAGAATTGAGAGAGCAGTAAAATAGGACTAGAT
TGTGCTAAGCAGAGCAGGACTAATGATATTAATGAATGTGATTCTATGTGACAATAAAAATTAACAGGCAGGAGCACCATCATATCCAGTATTTACAGGCAGAAGGGACGGCATGAAGTC
GATGGCAGCATCTGTCGATCTTCCATCACCATCCATCTCGTGGGAAGCGGCATTGGCATATTTCACCTCTAAAGGATTAGATATCCTTGACCTGACCACTCTCCTAGAGGTAAGGAAGCT
ACAATCTTTATCAATACAGTCAAGAGTAAATTATTTTCTGTTCGATATTAAAAGGGAGACAACTAAGAAAGCAGATTCGTATACTTGGAGTTTGTTTAGTTGCCAAAAACTTTTCTGAGT
TTATATTTTCTAAATTTCATGAAAACATATATAGATAGTGAAAATTTAAAAAAAAAAAATTGAAAAGTAATAGTGAAAATATGACAGTTTCTTGTTCTTAATCCTGTTTCTTTTTCAGCA
AACTATACATGTTTTCTACAACTAAACAGTCTACATACATTTCTAAGTCGTTTATAAGAAAATAACAAAACAAAATAAAAAGAGAAAGAGTTGAAGAAAACACCTTGGGCATTACAGACT
GCAATTTAAATAGTCTTACAGTTACAGGAGATAGAACACACTAAAGCCTACATGAAAGAAAGAGATATTGAGAAAAGCAGGAGATAAGTAAAGTTGCAAAATTTTGCTGGGTCAAACAAA
GAGGCCTTACACACACACCAACACGCACCATTTCACCGTCCAGTTTCTAGCTTTCAATATCAGGAAAGCAGGAGGTAAGTAGAAATAAAAGGACACGACCATATGAAGAAGGCAACATTT
CAATATGGCGTACAGGTGACTCCTATCAACCTTTGTTCATCAATGTCGCCCCTTACATTTGAGCAAGGCCTATTTTCGGGGAAAAGAAGTCTTGCAGCCAGAGAATAAATACAATAACAT
CTCCAATTTACCGAGTGTGAACGCTCCAAATCCTAAAACGACAGAATCTAGAAAGAGAAAAAAGAAGGAAGAAAAAACTTGAAGATAGTAGAGCCTTAAGGGCAATATTAAACTTCATGA
TACTGTAACTTATTTATGACTGAATATCCTTATTGGTTTCAGGAGCACACTCAATGGGAAGAACACATTGCAGCCATATTGTTGATAGGCTATACAATTTCAATAATACCGGAAAGCCAG
ACAGAAGCATAGCAGCAAGTTTCTTAGCCGAACTCCGGAAGCTATGTCCCAAAACCCAAAAGGGCCAAACTGACCTACTTGTATTCCTAAACCCAGAATCAGGCTCAAATTACACATTCA
CATCATCCTACTTCTCCAGAGTTCTATCAAAAAAAGTTGTCCTAGGAGTCGATCAGCAGCTACTCTTTGGTGATATCACAAAGGAGATTGTGACAGAATTGCAGGGTTTTGAAGATTTCC
GGAAATCATTTGCATTGTCCATGAGTCGGATGGGAAACCTAAATGTTTTGACTGGAGGGAAAGGACAGATACGAAGAGATTGCCGATATATAAATCCCAACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGAAAAGAGATCAACCAGCAGTTACGATCCTTCCACTGTTGGCTCTTGCAGTATTAAGCTTCTTGCCGGCAGACGTGAAGGCCGCCACGTCGCTGCCGACACCTGTGAAGCTCCAA
TGGCATTACTACAAGGTCCACAATACATGTGATGATGCCGAAGCTTATATACAGTACCAAGTGAAAAGGTTTTGGCAGTCTGACAAGAGCATCACACCTAAGCTACTTCGCTTGCTCTAC
TCGGATTGTTTAGTAACCGGCTGTGATGCATCTATTCTACTAGACGTGCCTAACTCGGAGAAGACTGCACCACAGAACATAGGCCTTGGAGGGTTTGTGGTGATCGACAAGATCAAAACT
GTTCTTGAGCAGCGGTGTCCTGGAGTAGTTTCTTGCGCTGATATTCTAAATCTTGCCACTAGAGATGCTGTTCACTTGGCAGGAGCACCATCATATCCAGTATTTACAGGCAGAAGGGAC
GGCATGAAGTCGATGGCAGCATCTGTCGATCTTCCATCACCATCCATCTCGTGGGAAGCGGCATTGGCATATTTCACCTCTAAAGGATTAGATATCCTTGACCTGACCACTCTCCTAGGA
GCACACTCAATGGGAAGAACACATTGCAGCCATATTGTTGATAGGCTATACAATTTCAATAATACCGGAAAGCCAGACAGAAGCATAGCAGCAAGTTTCTTAGCCGAACTCCGGAAGCTA
TGTCCCAAAACCCAAAAGGGCCAAACTGACCTACTTGTATTCCTAAACCCAGAATCAGGCTCAAATTACACATTCACATCATCCTACTTCTCCAGAGTTCTATCAAAAAAAGTTGTCCTA
GGAGTCGATCAGCAGCTACTCTTTGGTGATATCACAAAGGAGATTGTGACAGAATTGCAGGGTTTTGAAGATTTCCGGAAATCATTTGCATTGTCCATGAGTCGGATGGGAAACCTAAAT
GTTTTGACTGGAGGGAAAGGACAGATACGAAGAGATTGCCGATATATAAATCCCAACTAA

Retrieve as FASTA