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Entry information : CpapPrx17 (CpPOD11 / evm.model.supercontig_195.9)
Entry ID 8751
Creation 2011-06-28 (Qiang Li)
Last sequence changes 2012-08-16 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-08-16 (Christophe Dunand)
Peroxidase information: CpapPrx17 (CpPOD11 / evm.model.supercontig_195.9)
Name (synonym) CpapPrx17 (CpPOD11 / evm.model.supercontig_195.9)
Class Class III peroxidase     [Orthogroup: Prx024]*
Taxonomy Eukaryota Viridiplantae Streptophyta Caricaceae Carica
Organism Carica papaya    [TaxId: 3649 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CpapPrx17
start..stop		 S start..stop
CclPrx109 402 1.56e-141 1..307 3..324
MePrx79 401 3.52e-141 1..306 4..323
PpePrx68 395 1.08e-138 1..307 1..326
HaPrx42 388 4.63e-136 1..307 1..325
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8751' 'join(64959..65183,65657..65787,65882..66036,66129..66589)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 64959..65183 223 N° 2 65657..65787 129 N° 3 65882..66036 153 N° 4 66129..66589 459
join(64959..65183,65657..65787,65882..66036,66129..66589)


exon

Literature and cross-references CpapPrx17 (CpPOD11 / evm.model.supercontig_195.9)
DNA ref. Phytozome 12:   supercontig_195 (64959..66589)
Protein sequence: CpapPrx17 (CpPOD11 / evm.model.supercontig_195.9)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (299)
PWM (Da):   %s   35139.87 (32746.6)  
PI (pH):   %s   8.31 (8.38) Peptide Signal:   %s   cut: 25 range:25-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAGFAALALVLVVISINLTGQCHAALQIGFYDRKCGLNNVESIVTQEVTKKFIKDRTIAAALIRMYFHDCFVKVCPNLSVRGYDVIDAAKDAVEAACPGVVSCADIIAMATRDAVSLVTG
GRYNVETGRRDGLESLASNVVLPSPQMTVSQSVSVFAKKGFSPKDMVYLLGGxHTVGFAHCVFFQDRLYNFQNTGKPDPTMNSTLLQALRFMCPQNSLRNNAVNLDQNPSSSFTVDNSFY
KQILLNRGILQIDQELALDSITKDIVKGIATSNDFITKFAEAMVKLGRTEVLTDTQGEIRRSCRSVNNNNNNSNNSFLTKIFP

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (Short sequence after 'FHDC' is missing because of NNNN in DNA sequence). join(64959..65183,65657..65787,65882..66036,66129..66586)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGGTTTTGCTGCACTGGCACTAGTTCTTGTTGTTATCTCTATAAACTTGACAGGCCAATGTCATGCTGCTCTTCAAATAGGATTTTATGACAGAAAATGTGGTTTGAATAACGTC
GAGTCGATTGTCACTCAAGAAGTCACAAAAAAATTCATCAAGGATCGAACAATTGCAGCTGCACTTATTCGCATGTACTTCCATGATTGTTTTGTCAAGGTATGTGTATCATAATCTATT
TTTTTCTTTATCGATATGCAAATAATAATAAATTTGATCATTTCTTATCATATAAGTGTCATGCCTTAGAGTTTAAGCATCACTCGCTCAGTACTTAAATTGCCGTGAGTTCAATAATTG
CATATTATCTCAGTATGGAATTAAAATATCAATATCTTCATCATTCAAAATTTTAATATTCTTAATATTCTCATATTATAATTTACACGAGATTTAAGATTGCACCAGCTGAAAAGACCA
AGCTAACATGTCTTTAATATCATTTGAAACACCTCAAAACCCAAAGAATCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCAAATCTAAGTGTAAGAGG
CTATGATGTCATTGATGCAGCTAAGGATGCGGTGGAGGCAGCCTGCCCAGGAGTTGTGTCTTGTGCTGATATCATAGCTATGGCTACAAGAGATGCTGTTTCCCTGGTAACACATTTTTT
CACTTCATCTTCCTTTTTAGATAAATGTGTACAAACATATATTATAACCTGAAAGTTCTGTACGCACCCAATTTTCCTGCAGAGTAGAGGAGGAAGATACAATGTAGAAACAGGCAGAAG
AGACGGCCTTGAATCTCTTGCTTCAAATGTTGTTCTCCCTTCACCGCAAATGACTGTTTCGCAATCTGTTTCTGTCTTTGCTAAGAAAGGATTTTCTCCTAAAGACATGGTTTATCTTCT
TGTGGTATATATATAATATATAATTCCACTTGCTCAATTATATTTTCACTTGTTTCTTTCTCAAAATTCTGATTATTATTAATGGTATATATTTAGGTGGANNNCACACTGTTGGGTTTG
CACATTGTGTTTTCTTTCAGGATCGTTTGTATAATTTCCAGAACACAGGCAAACCAGACCCAACCATGAACTCAACATTGCTTCAGGCGCTCCGGTTCATGTGTCCTCAGAATTCACTAC
GAAATAATGCTGTAAATCTTGATCAGAATCCCTCTAGTTCATTCACTGTTGATAACTCCTTCTACAAGCAAATTCTTCTAAATAGAGGGATTCTCCAGATAGATCAAGAGCTAGCTCTGG
ATTCAATAACAAAGGACATAGTCAAGGGTATTGCTACCAGCAATGACTTCATAACGAAATTTGCTGAGGCAATGGTTAAGTTAGGTCGTACAGAAGTCCTTACGGACACACAAGGAGAGA
TTAGAAGATCATGTCGTTCCGTCAACAACAACAACAACAATAGTAATAACAGCTTCTTAACAAAAATATTTCCTTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGGTTTTGCTGCACTGGCACTAGTTCTTGTTGTTATCTCTATAAACTTGACAGGCCAATGTCATGCTGCTCTTCAAATAGGATTTTATGACAGAAAATGTGGTTTGAATAACGTC
GAGTCGATTGTCACTCAAGAAGTCACAAAAAAATTCATCAAGGATCGAACAATTGCAGCTGCACTTATTCGCATGTACTTCCATGATTGTTTTGTCAAGGTATGTCCAAATCTAAGTGTA
AGAGGCTATGATGTCATTGATGCAGCTAAGGATGCGGTGGAGGCAGCCTGCCCAGGAGTTGTGTCTTGTGCTGATATCATAGCTATGGCTACAAGAGATGCTGTTTCCCTGGTAACAGGA
GGAAGATACAATGTAGAAACAGGCAGAAGAGACGGCCTTGAATCTCTTGCTTCAAATGTTGTTCTCCCTTCACCGCAAATGACTGTTTCGCAATCTGTTTCTGTCTTTGCTAAGAAAGGA
TTTTCTCCTAAAGACATGGTTTATCTTCTTGGTGGANNNCACACTGTTGGGTTTGCACATTGTGTTTTCTTTCAGGATCGTTTGTATAATTTCCAGAACACAGGCAAACCAGACCCAACC
ATGAACTCAACATTGCTTCAGGCGCTCCGGTTCATGTGTCCTCAGAATTCACTACGAAATAATGCTGTAAATCTTGATCAGAATCCCTCTAGTTCATTCACTGTTGATAACTCCTTCTAC
AAGCAAATTCTTCTAAATAGAGGGATTCTCCAGATAGATCAAGAGCTAGCTCTGGATTCAATAACAAAGGACATAGTCAAGGGTATTGCTACCAGCAATGACTTCATAACGAAATTTGCT
GAGGCAATGGTTAAGTTAGGTCGTACAGAAGTCCTTACGGACACACAAGGAGAGATTAGAAGATCATGTCGTTCCGTCAACAACAACAACAACAATAGTAATAACAGCTTCTTAACAAAA
ATATTTCCTTAG

Retrieve as FASTA