1. Browse the Database
  2. View Redoxidase
Entry information : CpapPrx22 (CpPOD15 / evm.model.supercontig_23.12)
Entry ID 8755
Creation 2011-06-28 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-08-16 (Christophe Dunand)
Peroxidase information: CpapPrx22 (CpPOD15 / evm.model.supercontig_23.12)
Name (synonym) CpapPrx22 (CpPOD15 / evm.model.supercontig_23.12)
Class Class III peroxidase    [Orthogroup: Prx032]
Taxonomy Eukaryota Viridiplantae Streptophyta Caricaceae Carica
Organism Carica papaya    [TaxId: 3649 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CpapPrx22
start..stop		 S start..stop
GmPrx59 509 0 9..324 12..327
LjPrx70 501 0 6..323 7..327
CsaPrx85 471 6.7e-169 20..323 20..323
RcPrx06 470 1.55e-168 20..323 26..329
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8755' 'complement(join(95592..95998,96115..96280,96410..96607,96761..96961))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 96761..96961 199 N° 2 96410..96607 196 N° 3 96115..96280 164 N° 4 95592..95998 405
complement(join(95592..95998,96115..96280,96410..96607,96761..96961))


exon

Literature and cross-references CpapPrx22 (CpPOD15 / evm.model.supercontig_23.12)
DNA ref. Phytozome 12:   supercontig_23 (96961..95592)
Protein sequence: CpapPrx22 (CpPOD15 / evm.model.supercontig_23.12)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (303)
PWM (Da):   %s   36030.59 (33607.2) Transmb domain:   %s   o375-397i511-533o560-582i738-755o
PI (pH):   %s   8.73 (8.40) Peptide Signal:   %s   cut: 21 range:21-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MFPRTLLLLLSLILFKTTHAQLHLDYYRNSCPDVESIVRSAVQEKFQQTFVTAPATLRLFFHDCLVRGCDASVLLASRNNRAEKDNPENLSLAGDGFDTVIKAKAAVDNVQECRNKVSCA
DILVMATRDVIALTGGPSYAVELGRLDGRVSTKASVRHQIPHPDFKLEKLEAMFATHGLTLVDLIALSGAHTIGFSHCSRFSKRLYNFKSKTRIDPTLNPAYARELRGMCPEEVDSRIAI
SMDQTTPQTFDNVYYKNLERGRGLFTSDQTLFTHKRSRDIVRLFAFNSTAFEIAFVDAITKLGRIGVKTGNQGEIRGDCTIVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTTCCTCGTACTTTGCTCTTGCTACTCTCACTTATTCTTTTTAAAACAACTCATGCCCAGCTTCACTTGGACTACTACAGAAACTCATGCCCAGATGTGGAATCCATTGTTCGATCT
GCGGTCCAAGAGAAGTTTCAGCAAACATTTGTTACAGCACCAGCCACTCTCAGGCTCTTCTTCCATGATTGCCTCGTTCGGGTTTGTTGCCTTTTTTCATTGAAACTAACAGTGGCTTTT
ACTTCCGTTAATCAAGTTTGCAATGTAAATAATGAAGTTAACCTTTTGTATGTATATGTGTGTATGTAATAATGAAGTTATCTTTTGTGTGGGTATGTGTATATGTGTGTATAGGGGGGT
GTGATGCTTCTGTGCTACTAGCTTCACGGAATAACAGGGCGGAGAAAGATAATCCAGAGAATCTCTCGCTAGCTGGGGATGGGTTTGATACAGTGATCAAAGCTAAAGCTGCTGTTGATA
ACGTGCAGGAGTGCAGAAACAAAGTTTCTTGTGCTGATATTTTGGTTATGGCCACAAGGGATGTGATTGCATTGGTAAAACAAGCATTTCTATTATAACATTTTCAATAAGGGGCAACTT
TTTATCATTCAAAGACATTAACTTTTTAGCAAAAGTGAACGTTTTTTAATTGGTTAGTGATCGAGAAGTGTTCTGTGATGCAGACACAGGAGGACCATCTTACGCAGTAGAATTGGGAAG
ACTTGATGGGAGGGTCTCTACAAAAGCAAGCGTCAGGCACCAAATCCCACATCCTGATTTCAAATTGGAAAAACTCGAAGCCATGTTTGCCACTCACGGACTCACTTTAGTAGATCTCAT
TGCACTTTCAGGTAATGACAATTTTCTCAAAAGGTTGTAGAAGGAAATCGATATAATGGTATGGTAATAAGTTTTCATGGAGATTCTTGTCATTTTGGAGGAGAGTAATAAAGCGTGTAA
AATACAGGAGAGCACATACAATTGGTTTCTCACATTGCAGCCGCTTCTCCAAGAGACTTTATAACTTCAAGAGCAAAACCAGGATTGATCCCACTCTGAATCCAGCATATGCAAGGGAGC
TTCGAGGTATGTGCCCAGAAGAAGTAGACTCAAGAATTGCCATAAGCATGGATCAAACTACACCTCAGACATTTGATAACGTATACTACAAGAATCTCGAACGAGGAAGGGGACTGTTCA
CATCTGATCAAACACTGTTTACTCATAAAAGATCAAGAGATATTGTTCGCTTATTCGCATTCAATTCCACAGCATTTGAAATTGCTTTTGTTGATGCCATTACAAAGCTAGGACGTATAG
GGGTCAAGACCGGAAATCAGGGAGAAATTAGGGGTGATTGCACCATTGTGAACTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTTCCTCGTACTTTGCTCTTGCTACTCTCACTTATTCTTTTTAAAACAACTCATGCCCAGCTTCACTTGGACTACTACAGAAACTCATGCCCAGATGTGGAATCCATTGTTCGATCT
GCGGTCCAAGAGAAGTTTCAGCAAACATTTGTTACAGCACCAGCCACTCTCAGGCTCTTCTTCCATGATTGCCTCGTTCGGGGGTGTGATGCTTCTGTGCTACTAGCTTCACGGAATAAC
AGGGCGGAGAAAGATAATCCAGAGAATCTCTCGCTAGCTGGGGATGGGTTTGATACAGTGATCAAAGCTAAAGCTGCTGTTGATAACGTGCAGGAGTGCAGAAACAAAGTTTCTTGTGCT
GATATTTTGGTTATGGCCACAAGGGATGTGATTGCATTGACAGGAGGACCATCTTACGCAGTAGAATTGGGAAGACTTGATGGGAGGGTCTCTACAAAAGCAAGCGTCAGGCACCAAATC
CCACATCCTGATTTCAAATTGGAAAAACTCGAAGCCATGTTTGCCACTCACGGACTCACTTTAGTAGATCTCATTGCACTTTCAGGAGCACATACAATTGGTTTCTCACATTGCAGCCGC
TTCTCCAAGAGACTTTATAACTTCAAGAGCAAAACCAGGATTGATCCCACTCTGAATCCAGCATATGCAAGGGAGCTTCGAGGTATGTGCCCAGAAGAAGTAGACTCAAGAATTGCCATA
AGCATGGATCAAACTACACCTCAGACATTTGATAACGTATACTACAAGAATCTCGAACGAGGAAGGGGACTGTTCACATCTGATCAAACACTGTTTACTCATAAAAGATCAAGAGATATT
GTTCGCTTATTCGCATTCAATTCCACAGCATTTGAAATTGCTTTTGTTGATGCCATTACAAAGCTAGGACGTATAGGGGTCAAGACCGGAAATCAGGGAGAAATTAGGGGTGATTGCACC
ATTGTGAACTAG

Retrieve as FASTA