Entry information : CsaPrx104 (Cucsa.397150.1)
Entry ID 8803
Creation 2011-06-29 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: CsaPrx104 (Cucsa.397150.1)
Name (synonym) CsaPrx104 (Cucsa.397150.1)
Class Class III peroxidase    [Orthogroup: Prx035]
Taxonomy Eukaryota Viridiplantae Streptophyta Cucurbitaceae Cucumis
Organism Cucumis sativus    [TaxId: 3659 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsaPrx104
start..stop
S start..stop
CsaPrx62 508 0 1..315 1..314
GmPrx89 434 1.24e-154 7..316 7..320
RcoPrx09 428 4.64e-152 6..315 7..318
GhPrx04 422 7.24e-150 14..315 1..303
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8803' 'complement(join(4658..5206,5647..5838,6019..6225))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 6019..6225 205 N° 2 5647..5838 190 N° 3 4658..5206 547  
complement(join(4658..5206,5647..5838,6019..6225))


exon

Literature and cross-references CsaPrx104 (Cucsa.397150.1)
DNA ref. Phytozome 12:   scaffold04146 (6225..4658)
Protein sequence: CsaPrx104 (Cucsa.397150.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   315 (293)
PWM (Da):   %s   34704.96 (32171.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.66 (7.66) Peptide Signal:   %s   cut: 23 range:23-315
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASINVSYFFIVLFLLAFSANAELSSHFYSKSCPRLKWIVRAGMAKAVNRDKRMGASMLRMFFHDCFVNGCEASVLLDDTPTMRGEKNAFPNRNSLRGFEVIDDIKTEVEAACKETVSCA
DILALAARDGADLLGGPFWDVRLGRRDSRTASESEANNNLPAPSSNLSTLISMFAVKGFNANEMTAMSGAHTIGMGQCQFFRTRIYNDTNINSAFAAQRRANCPLNGGDSNLAPLDSTDI
KFDNKYFIDLINQCGLFHSDQELSNGGSQDALVRTYSMNSITFRKDFENAMIKMGNLSPASGTITEIRKNCRVVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from phytozome (5' end is missing which has been completed).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCCATTAACGTTTCTTATTTTTTCATTGTTCTTTTCCTTTTAGCCTTCTCAGCCAATGCTGAGCTTTCATCTCATTTTTACTCGAAAAGTTGTCCTAGACTCAAATGGATTGTT
CGTGCTGGTATGGCCAAAGCTGTAAACAGAGATAAGCGTATGGGAGCTTCGATGCTTCGCATGTTCTTCCACGATTGCTTTGTAAAT
GTACGTACGAGGATAAGAACACCATTTTCTTTG
TCTCTTCTTTTTTTTTCTTTCTGAAATATATAAGTGGAAGTTTAAACATTTATAGTAATCGTAACCAACAAACAAGACTATATAAATAGCTTAATTCAATAAGACATATATTTACAAGTG
AATTTCCTAGTTACTTTTTAAATACAGGGGGTTGCGAAGCTTCTGTATTGCTTGATGATACTCCAACAATGAGGGGCGAAAAAAATGCGTTCCCAAATAGGAATTCACTTAGAGGTTTCG
AAGTAATTGACGATATTAAAACTGAGGTGGAAGCTGCTTGCAAAGAAACCGTTTCATGTGCTGATATTCTTGCTCTTGCTGCTCGTGATGGCGCCGATTTG
GTAATAATTTTAATCCTTA
TTATTTTAAGTTCAAACTTAGTCTTTTTCTCAATAAAGTGTGTATATATGTAGTTGTGATCTGACGTTAAAATTGCAACTATTTTTCTGTTAAATTTGTTATAGTTTAGACAACTTGATA
AGTATATGATATTCAATCCATTATCTTATTATTTGTGTTATATCTATTTTGAAATATTTGATTTATTCTTGACCTTTTCCTGCATGTTTATTTTGCATGCAACTAATAAGTACAAAATAA
TATTGAAAAGGAAAAATATATTTTTGTATATTCTACAAAATAGAAAGAATAAAAAAATATGTATAATTTTGTCCAAAATGCCTAAACAAAACAAATTTATTATAAAACCAAAATGTTCGT
AAATTTTTTAAAAAGTCATTTCAAACACACAGTTAACGATTTCTTTAATTTTATTATGTAGCTCTTGGAGGACCATTTTGGGATGTACGGCTTGGTCGAAGGGACTCGAGGACCGCGAGT
GAGAGCGAAGCAAACAACAATCTTCCAGCACCAAGCTCCAACCTCTCGACACTAATCTCAATGTTCGCTGTTAAAGGCTTTAACGCCAACGAAATGACAGCTATGTCTGGTGCTCACACC
ATAGGCATGGGACAATGTCAATTCTTCCGAACTCGGATTTACAATGATACCAACATCAACAGTGCCTTCGCTGCTCAGCGACGAGCTAACTGCCCGCTTAACGGTGGTGACAGTAACTTG
GCCCCTCTTGACTCAACCGACATAAAGTTTGACAACAAATATTTCATTGACCTAATTAATCAGTGTGGCTTGTTTCATTCGGACCAAGAACTCTCCAACGGTGGTTCACAAGATGCGTTG
GTTCGAACCTATAGTATGAATTCCATTACCTTTAGAAAGGATTTTGAAAATGCAATGATCAAGATGGGGAATCTTAGTCCTGCAAGTGGAACGATTACTGAGATTAGAAAAAATTGCAGG
GTCGTGAATTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCCATTAACGTTTCTTATTTTTTCATTGTTCTTTTCCTTTTAGCCTTCTCAGCCAATGCTGAGCTTTCATCTCATTTTTACTCGAAAAGTTGTCCTAGACTCAAATGGATTGTT
CGTGCTGGTATGGCCAAAGCTGTAAACAGAGATAAGCGTATGGGAGCTTCGATGCTTCGCATGTTCTTCCACGATTGCTTTGTAAAT
GGTTGCGAAGCTTCTGTATTGCTTGATGATACT
CCAACAATGAGGGGCGAAAAAAATGCGTTCCCAAATAGGAATTCACTTAGAGGTTTCGAAGTAATTGACGATATTAAAACTGAGGTGGAAGCTGCTTGCAAAGAAACCGTTTCATGTGCT
GATATTCTTGCTCTTGCTGCTCGTGATGGCGCCGATTTG
CTTGGAGGACCATTTTGGGATGTACGGCTTGGTCGAAGGGACTCGAGGACCGCGAGTGAGAGCGAAGCAAACAACAATCTT
CCAGCACCAAGCTCCAACCTCTCGACACTAATCTCAATGTTCGCTGTTAAAGGCTTTAACGCCAACGAAATGACAGCTATGTCTGGTGCTCACACCATAGGCATGGGACAATGTCAATTC
TTCCGAACTCGGATTTACAATGATACCAACATCAACAGTGCCTTCGCTGCTCAGCGACGAGCTAACTGCCCGCTTAACGGTGGTGACAGTAACTTGGCCCCTCTTGACTCAACCGACATA
AAGTTTGACAACAAATATTTCATTGACCTAATTAATCAGTGTGGCTTGTTTCATTCGGACCAAGAACTCTCCAACGGTGGTTCACAAGATGCGTTGGTTCGAACCTATAGTATGAATTCC
ATTACCTTTAGAAAGGATTTTGAAAATGCAATGATCAAGATGGGGAATCTTAGTCCTGCAAGTGGAACGATTACTGAGATTAGAAAAAATTGCAGGGTCGTGAATTAA

Retrieve as FASTA