View Redoxidase 8825

Entry information : CsaPrx38 (Cucsa.128460.1)

Entry ID	8825
Creation	2011-06-29 (Qiang Li)
Last sequence changes	2011-12-08 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2015-10-15 (Christophe Dunand)

Peroxidase information: CsaPrx38 (Cucsa.128460.1)

Name (synonym)

CsaPrx38 (Cucsa.128460.1)

Class

Class III peroxidase [Orthogroup: Prx018]

Taxonomy

Eukaryota Viridiplantae Streptophyta Cucurbitaceae Cucumis

Organism

Cucumis sativus [TaxId: 3659 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	CsaPrx38 start..stop	S start..stop
CsaPrx37	520	0	1..339	1..337
CsaPrx39	451	9.21e-161	14..339	11..338
MePrx89	447	6.29e-159	14..339	11..334
MePrx80	444	7.21e-158	18..339	15..334

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8825' 'join(471379..471618,471931..472129,472255..472832)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	471379..471618	238	N° 2	471931..472129	197	N° 3	472255..472832	576
join(471379..471618,471931..472129,472255..472832)

Literature and cross-references CsaPrx38 (Cucsa.128460.1)

DNA ref.	Phytozome 12: scaffold01024 (471379..472832)

Protein sequence: CsaPrx38 (Cucsa.128460.1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	339
PWM (Da):	36759.41	Transmb domain:	i13-35o
PI (pH):	7.97

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MANSSPPLKLFQALFSKLLCIIFFFSLSTFATTSLRVGFYSSSCPDAEAIVEDAVDKAVSRNPGIAAGLIRMHFHDCFVRGCDASVLLESTPGNPSEKYHVANFPTLRGFEVIDEAKAKI
EAVCPNTVSCADVLAFAARDSANKVGGINYAVPAGRRDGFISRKEDANALPGFTFHAERLASEFGKRGLSVEEMVTLSGAHSIGIAHCPTFVGRLYSFNTTHAQDPSLDPSYADYLKSKC
PQPSSSGDDGSQQPDVDLDFSTPHRLDNRYYIELKNHRGLLISDQTLLSSSLTSKMVLRNAHYGSKWATKFGKAMVKMGKIDVLTGSKGEIRRQCSFV

Retrieve as FASTA

Remarks

Complete sequence from genomic (introns 1 and 2).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTAATTCTTCTCCTCCCCTTAAGTTATTCCAAGCACTTTTCTCCAAGCTCTTATGCATCATCTTCTTCTTTTCCCTATCTACTTTTGCTACTACAAGCCTCAGAGTAGGTTTCTAT
AGTTCATCTTGTCCCGATGCTGAGGCCATTGTTGAAGATGCGGTAGACAAAGCCGTCTCTAGAAACCCCGGTATCGCTGCAGGTCTCATTAGAATGCACTTCCACGACTGCTTTGTTAGG
GGGTATGTTTCATTCAAAGTTTTTCCTTTGATAAAACCTTATAAATTATAATAATACTGTATGATAAAATAAATTTTAACTTTTAGAACTACGTGAAAAATTCGTTCCACAAAGACAAAA
TTCATGTAATTTAACCTCACTTTTAATATAACACACGCATTTGTCAAAAAACTTGAATTTAGATATCCATCTTTGCACTTTCTAATTTAGCAAATTTTGTATATTTTCTTTCTCTTTCTT
GAACCCACCCAATTATTATTAAGGAAAATAAAAAATTGACTTCTATATCTCTCTTTTGTTTTGTAATTTTTCAGGGATGTGATGCTTCTGTGCTTCTAGAATCGACTCCTGGAAATCCAT
CTGAGAAATATCATGTTGCAAACTTTCCAACCTTACGAGGTTTTGAGGTTATTGATGAAGCCAAGGCGAAAATTGAAGCTGTTTGTCCTAACACTGTGTCATGCGCCGACGTTCTTGCTT
TCGCTGCCCGCGATAGCGCCAACAAAGTTGGAGAGGTACGGTTAATTATCCCTAACTGATTAAATTCAAAAGCTTAAACTTTGATATATTACAATAGTTTTTTTTGAAAATTTGATACAT
TACAATACATTTAAATCTTCTCTACTCATATTTGTACCAGGTATTAACTATGCCGTACCAGCAGGCCGTCGTGATGGATTCATCTCGAGAAAGGAAGATGCTAACGCTCTCCCTGGTTTT
ACTTTCCATGCCGAGAGGCTGGCTAGTGAGTTCGGAAAACGAGGGTTGTCAGTGGAGGAGATGGTGACTCTTTCCGGTGCCCATTCCATAGGAATAGCTCATTGCCCTACCTTTGTTGGC
AGGCTATATTCCTTCAATACAACTCATGCACAAGACCCTTCCTTGGACCCCTCATATGCTGATTACTTGAAGAGCAAATGCCCACAGCCAAGTAGCTCTGGTGATGACGGGAGTCAGCAG
CCAGACGTGGATCTTGATTTTTCAACCCCGCATCGTTTGGATAACCGTTACTACATCGAGCTAAAGAACCACCGTGGGCTGCTGATCTCCGATCAGACATTGTTGAGCAGTTCATTGACT
TCAAAAATGGTGTTGAGAAATGCCCATTATGGGTCCAAATGGGCAACCAAGTTTGGGAAGGCAATGGTTAAAATGGGCAAAATTGATGTCCTTACAGGATCCAAGGGAGAGATCAGACGC
CAATGCAGCTTTGTGAAT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA