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Entry information : CsPrx43 (orange1.1g041339m/peroxidase 60-like/Cs7g19270)
Entry ID 8877
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2016-01-14 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2017-12-14 (Qiang Li)
Peroxidase information: CsPrx43 (orange1.1g041339m/peroxidase 60-like/Cs7g19270)
Name (synonym) CsPrx43 (orange1.1g041339m/peroxidase 60-like/Cs7g19270)
Class Class III peroxidase    [Orthogroup: Prx033]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsPrx43
start..stop		 S start..stop
CclPrx18 684 0 1..348 1..343
PtPrx88 443 1.66e-157 14..343 1..323
MePrx68 433 1.8e-153 31..343 21..325
RcPrx68 431 7.27e-153 30..343 20..325
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 15240820..15241077 256 N° 2 15240225..15240404 178 N° 3 15239972..15240137 164 N° 4 15239446..15239888 441
complement(join(15239446..15239888,15239972..15240137,15240225..15240404,1524082 0..15241077))


exon

Literature and cross-references CsPrx43 (orange1.1g041339m/peroxidase 60-like/Cs7g19270)
DNA ref. Citrus sinensis Annotation Project:   chr7 (15239322..15241136) GenBank:   NC_023052.1 (15241077..15239446) Phytozome 12:   scaffold00087 (256436..257546) [5' end]
Cluster/Prediction ref. Genebank:   102627290
Protein sequence: CsPrx43 (orange1.1g041339m/peroxidase 60-like/Cs7g19270)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   348
PWM (Da):   %s   37700.4 Transmb domain:   %s   i12-34o
PI (pH):   %s   7.95
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSERVDHIWKTKKVKQAVALLILRQCLLANIAGLSHGALQVGFYRGKCGIADVEMIVAGVVTARFIRDPTVVAALIRLQFHDCFVNGCDASILIDATNSEKTAIPNLTIRGYDIIDEAKA
AVERFCPGVVSCADLIAIAARDAVFLGGGGRYEVQTGRRDGLVSLAQNVSISIPGPSASIPQTMAVFANKGLNLTDMVLLMGGHSVGVAHCSIFKDRLYNFRSTGRPDPTMDSFLANKLR
ARCPLDTTTTTTTTANNTVDLDQNPFQIPFLDNSYYRQLMLNRGVLEIDQELALHPLTRATVMSIANALDFPIQFGTAMVKMGAIEVLTGMQGEIRRFCTATNWPPFT

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 7, 3 introns). Incorrect prediction from phytozome (3' end is missing which has not been completed yet due to 'NNNNNN' in DNA).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGTGAGAGAGTAGATCATATTTGGAAGACGAAGAAGGTGAAGCAGGCTGTGGCTTTGTTGATTCTCAGGCAGTGTTTATTAGCAAACATCGCAGGATTGAGCCATGGTGCATTACAG
GTAGGATTTTACAGAGGAAAATGTGGGATTGCTGATGTTGAGATGATAGTAGCCGGTGTTGTCACAGCAAGGTTCATCAGAGATCCCACTGTCGTGGCTGCCCTCATACGCTTGCAGTTT
CATGATTGCTTTGTCAATGTAAGCTTCCATTTTCCCAAGCATATATTCTTGCTTAAGTTTAGAACTGCATTGTTTGCATTCCATGCCCCAACAAATACGCATAGTTAATCAATTTTATCT
AGTCCTTAAAACTTCTATGAAGCAAGAAACATTGACGCTGCATTGGTTGGTAAACATTCTTTGTGTGCACACCGCGCATGTTTCATTCTTTTATTTCTTTTATGTTCTTTAATTGCAAAT
GTTTCCCGTCTATACTTTTATTATACAACGAATTAGACATACTGAATTGAAATTCATTAAATGGTCTACATACATTTGGAACTGGGTTTCTGCCTAGGAGTTTAATAAATCTGAACAATT
ATCTTGATATTTAAGCACTGATAAAACACAATATCAAACTAAATGCAAATCTGTGGGAATGGTGATGAGAAAGGGGGTTGCGACGCATCAATTCTTATAGATGCCACCAACAGCGAGAAA
ACAGCAATTCCAAATCTGACCATAAGGGGTTATGATATCATAGACGAAGCAAAGGCTGCTGTTGAAAGATTTTGTCCTGGTGTCGTTTCCTGTGCTGATCTCATTGCCATTGCTGCTAGA
GATGCTGTTTTCTTGGTACTTAAAACTTTCTCTCTGCGCATGCCATATCTGCTATATATTCAATCAAACTCAAAATTACTGTAATTGACAATTGAACTGCAGGGGGCGGCGGAGGAAGAT
ATGAGGTGCAAACAGGAAGAAGAGACGGTTTAGTGTCTCTAGCTCAGAATGTGTCCATTTCTATCCCAGGTCCTTCAGCTTCGATCCCTCAGACTATGGCCGTGTTTGCTAACAAAGGCC
TCAATCTTACCGACATGGTTCTTCTGATGGGTATTTAGCTTAAAACACTTTCAATGAAAGCACTTGAAAATTCTTGTGTTCATAATTTCCATTGCATTTTATGATTGCTTTAGGAGAGGT
CACTCTGTAGGAGTAGCACATTGCTCAATCTTCAAAGATCGTCTCTACAATTTCAGAAGTACAGGCAGACCCGACCCCACAATGGATTCATTCCTCGCGAATAAGCTGAGAGCGCGGTGC
CCTCTAGACACAACAACAACAACAACAACAACGGCAAACAACACGGTTGATCTTGATCAAAATCCATTTCAAATTCCATTCCTGGACAACTCTTACTACAGACAGTTAATGCTAAACAGA
GGAGTGCTCGAAATCGATCAAGAATTGGCATTACACCCATTGACAAGAGCCACTGTGATGAGCATAGCCAATGCCTTAGACTTTCCCATACAGTTTGGTACTGCAATGGTGAAAATGGGA
GCCATTGAAGTTCTCACTGGCATGCAAGGAGAGATTAGGAGATTCTGTACAGCCACAAATTGGCCACCATTTACATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGTGAGAGAGTAGATCATATTTGGAAGACGAAGAAGGTGAAGCAGGCTGTGGCTTTGTTGATTCTCAGGCAGTGTTTATTAGCAAACATCGCAGGATTGAGCCATGGTGCATTACAG
GTAGGATTTTACAGAGGAAAATGTGGGATTGCTGATGTTGAGATGATAGTAGCCGGTGTTGTCACAGCAAGGTTCATCAGAGATCCCACTGTCGTGGCTGCCCTCATACGCTTGCAGTTT
CATGATTGCTTTGTCAATGGTTGCGACGCATCAATTCTTATAGATGCCACCAACAGCGAGAAAACAGCAATTCCAAATCTGACCATAAGGGGTTATGATATCATAGACGAAGCAAAGGCT
GCTGTTGAAAGATTTTGTCCTGGTGTCGTTTCCTGTGCTGATCTCATTGCCATTGCTGCTAGAGATGCTGTTTTCTTGGGCGGCGGAGGAAGATATGAGGTGCAAACAGGAAGAAGAGAC
GGTTTAGTGTCTCTAGCTCAGAATGTGTCCATTTCTATCCCAGGTCCTTCAGCTTCGATCCCTCAGACTATGGCCGTGTTTGCTAACAAAGGCCTCAATCTTACCGACATGGTTCTTCTG
ATGGGAGGTCACTCTGTAGGAGTAGCACATTGCTCAATCTTCAAAGATCGTCTCTACAATTTCAGAAGTACAGGCAGACCCGACCCCACAATGGATTCATTCCTCGCGAATAAGCTGAGA
GCGCGGTGCCCTCTAGACACAACAACAACAACAACAACAACGGCAAACAACACGGTTGATCTTGATCAAAATCCATTTCAAATTCCATTCCTGGACAACTCTTACTACAGACAGTTAATG
CTAAACAGAGGAGTGCTCGAAATCGATCAAGAATTGGCATTACACCCATTGACAAGAGCCACTGTGATGAGCATAGCCAATGCCTTAGACTTTCCCATACAGTTTGGTACTGCAATGGTG
AAAATGGGAGCCATTGAAGTTCTCACTGGCATGCAAGGAGAGATTAGGAGATTCTGTACAGCCACAAATTGGCCACCATTTACATAA

Retrieve as FASTA