Entry information : CsPrx[P]65 (orange1.1g037048m)
Entry ID 8922
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2011-12-13 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2017-12-14 (Qiang Li)
Peroxidase information: CsPrx[P]65 (orange1.1g037048m)
Name (synonym) CsPrx[P]65 (orange1.1g037048m)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsPrx[P]65
start..stop
S start..stop
EcamPrx25 187 1.13e-58 1..209 76..300
EgrPrx25 185 3.24e-58 1..209 73..297
EglPrx25 184 6.6e-58 1..209 73..297
EguPrx25 183 2.16e-57 1..209 73..297
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8922' 'join(77983..78119,78180..78423,78424..78573,78595..78741)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 77983..78119 135 N° 2 78180..78423 242 N° 3 78424..78573 148 N° 4 78595..78741 145
join(77983..78119,78180..78423,78424..78573,78595..78741)


exon

Literature and cross-references CsPrx[P]65 (orange1.1g037048m)
DNA ref. Phytozome 12:   scaffold00233 (77983..78741)
Protein sequence: CsPrx[P]65 (orange1.1g037048m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   224
PWM (Da):   %s   23881.99  
PI (pH):   %s   4.71
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCDASVLLDDAATFTGEKTALPDFNSGRGFEVIDTIKCQLESSCPAFILKS*LRRCYCTSVVKQLGGPSWRVQLGRRDSTTASLDLANSDLPGPDMSLGELITAFADTGLTAEEMAALSG
ARTIGQ
PTDIDPLYEVSLREKKYASGVSVLVTT*IFLLPLMSQSPISFDNDYYKSLFRGGSTASQPSANAYSPAAEFFLRDLAFSLLQRSKWVSAHSRGLGGEIQ

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from phytozome (5' end is missing due to NNNN in DNA, stop in frame).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGATGTGATGCATCCGTATTATTAGACGATGCAGCAACTTTCACAGGCGAAAAAACTGCACTTCCCGATTTCAATTCAGGAAGAGGATTTGAAGTCATTGACACCATTAAATGTCAACTA
GAGAGTTCATGTCCGGC
GCGTCGTTTCATGTGCTGACATCTTAGCTGTCGCCGCAAGGGACTCCGTCGTCGCAGTAAGAATTTATTTTAAAATCCTGACTGCGCCGCTGTTATTGTACTA
GTGTGGTTAAGCAGCTGGGTGGACCGAGCTGGAGGGTTCAATTGGGAAGGAGAGATTCAACGACGGCAAGTCTTGATTTAGCAAACAGTGACTTGCCAGGGCCAGATATGAGCCTTGGTG
AACTAATCACAGCTTTCGCAGACACGGGACTCACTGCTGAAGAAATGGCGGCGCTGTCAGGAGCTCGCACAATTGGCCAAGCA
CACCGACAGACATTGATCCCTTGTATGAAGTATCCTT
GAGAGAAAAGAAATATGCCTCGGGAGTATCAGTGCTGGTGACAACGTAAATATTCTTGCTCCCCTTGATGTCTCAAAGCCCCATTTCTTTTGACAATGACTATTACAAGAGCCTG
TGCGA
GGGCTTTTGATTTCGGACTTTCGTGGGGGCTCAACAGCTTCTCAACCCTCAGCGAATGCTTATAGCCCTGCCGCGGAATTCTTCTTGAGAGATTTGGCATTTTCGCTTTTGCAACGGTCG
AAATGGGTCTCGGCCCACTCACGGGGATTGGGTGGCGAGATCCAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGATGTGATGCATCCGTATTATTAGACGATGCAGCAACTTTCACAGGCGAAAAAACTGCACTTCCCGATTTCAATTCAGGAAGAGGATTTGAAGTCATTGACACCATTAAATGTCAACTA
GAGAGTTCATGTCCGGC
ATTTATTTTAAAATCCTGACTGCGCCGCTGTTATTGTACTAGTGTGGTTAAGCAGCTGGGTGGACCGAGCTGGAGGGTTCAATTGGGAAGGAGAGATTCAACG
ACGGCAAGTCTTGATTTAGCAAACAGTGACTTGCCAGGGCCAGATATGAGCCTTGGTGAACTAATCACAGCTTTCGCAGACACGGGACTCACTGCTGAAGAAATGGCGGCGCTGTCAGGA
GCTCGCACAATTGGCCAAGCA
CCGACAGACATTGATCCCTTGTATGAAGTATCCTTGAGAGAAAAGAAATATGCCTCGGGAGTATCAGTGCTGGTGACAACGTAAATATTCTTGCTCCCC
TTGATGTCTCAAAGCCCCATTTCTTTTGACAATGACTATTACAAGAGCCTG
TTTCGTGGGGGCTCAACAGCTTCTCAACCCTCAGCGAATGCTTATAGCCCTGCCGCGGAATTCTTCTTG
AGAGATTTGGCATTTTCGCTTTTGCAACGGTCGAAATGGGTCTCGGCCCACTCACGGGGATTGGGTGGCGAGATCCAA

Retrieve as FASTA