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Entry information : GmAPx10 (Glyma11g08580.1)
Entry ID 8929
Creation 2011-07-04 (Qiang Li)
Last sequence changes 2011-12-14 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-12-02 (Qiang Li)
Peroxidase information: GmAPx10 (Glyma11g08580.1)
Name (synonym) GmAPx10 (Glyma11g08580.1)
Class Ascorbate peroxidase     [Orthogroup: APx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmAPx10
start..stop		 S start..stop
GmAPx05 312 6.64e-108 1..254 1..299
MtAPx05 252 3.12e-84 6..250 5..278
GmAPx06 245 1.34e-81 1..251 1..280
MeAPx09 237 1.95e-78 1..244 1..273
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8929' 'join(6074093..6074208,6074725..6074860,6074990..6075037,6076413..6076487,6076595..6076677,6076759..6076858,6077091..6077297)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 6074093..6074208 114 N° 2 6074725..6074860 134 N° 3 6074990..6075037 46 N° 4 6076413..6076487 73
N° 5 6076595..6076677 81 N° 6 6076759..6076858 98 N° 7 6077091..6077297 205  
join(6074093..6074208,6074725..6074860,6074990..6075037,6076413..6076487,6076595 ..6076677,6076759..6076858,6077091..6077297)


exon

Literature and cross-references GmAPx10 (Glyma11g08580.1)
DNA ref. Phytozome 12:   Gm11 (6074093..6077297)
Protein sequence: GmAPx10 (Glyma11g08580.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   255
PWM (Da):   %s   29113.32 Transmb domain:   %s   o227-246i
PI (pH):   %s   9.77
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVEPIVVDEEYRKEIEMARRELGVFITNNKCAPLMLQFAWNDAATYDAKSRRGGPNGSIRLRIGQELKHEANKGLEKAVQYCGTKLKLKKVSYANLYQVLRKIFSRMGLSDEQDIVALCG
GHTLGETHKDRSKFEEGKSTNKPLKFDNSYFKELLIKDASFSRLPMDYALVEDPKFHHYVERYADEEIFFKEYAISHKKLSELGFNLNNLDQPKGPYAKLNQHKGLIGIGIASVVVTVIL
GYLLKRKKNQLKN

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from phytozome (long sequence in frame is missing due to 'n'). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGGAACCTATTGTAGTTGACGAGGAGTATCGCAAGGAAATAGAAATGGCTCGACGAGAACTTGGCGTTTTCATCACCAACAATAAATGCGCCCCTCTCATGCTTCAATTTGCGCGT
ACCTCACACTACTTAATTACTGCTTTCATGTCTTTCTAGCTAATTCTCTCCATTGTCTCCGGTGGTTCGCAGAATTTTAGCGTGTTTGAATGAAATTTCATAGAATTGATTTTTGATTTA
AGTGTATGTTTAATTGGACGTTAGGTTATTTAAAATTGTATTGTTTACCTAAATAAACTTTTACATGTTTGATTCTACACAATTTTATTTAAAATCAATTTTACTTACACTTATATTCAA
ACACACAAATATTGATTTTAAAGTGAAATGATTTATGGTTGAATGTTTTGATCATTAAAGTAAGTTAATAGAAAAATTCTGTATAAATATTTTTATCTTACATAAAAATGACCTAAAGTT
GCGCTAAGCCGTCAACTTATCGATCTTAAACCAAGAACCAATTGTGTTACATACAAATATACAATAAAAAAACATATGAAAAAATTACTTCAAATCTCATCAACTAATATTTTAACGTGA
AATCAATCACACAATTAATTAAATTGTGGTACAGGTGGAATGATGCTGCAACTTACGATGCCAAGAGCAGAAGAGGAGGCCCCAACGGTTCTATCAGATTAAGGATTGGACAAGAGTTGA
AACACGAAGCAAACAAGGGATTGGAAAAAGCAGTTCAATACTGTGGTCAAAATTTAATTTCTTCTTTTTCCTTTGACTGATCAAATGATCAATATGTACGTTTTTCAGTCTGTTTTTTTA
TTACTTTTCTTCGTTTTTATTTTAATGTAATTGGTTTCTTTCCCAAACAGAAATAGTGAAGACCAAACTTAAGCTTAAAAAAGTTTCATACGCGAACCTTTACCAGGTTTTATTTTAGTT
TCTGATCCGCAACTGGTTATATATATAGTGATAATTAAACCACTTAATTAGACAACAGGGGATCCAATCAAATTAAGTTTGATGATATTAACTTGTATACGGTTGGATTTGCATTTCAGC
TTGTGGTGCTGTTGCAGTAGAGGTCACGGCAGAAAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTACTATTCAGATATGGATATCATTGAAAATATTTATATATGGGGTTGTGTAATTTATATAGAGAGAATTGTACTGATAATTTAT
CATAAGATTGTTTAACTTTCTTTTACTTTAACAACCCCTTTACATATATTTGTTTGGTTTAGAGCCTCTTAATCACGGTTTTCGGTTTTGATATGTTGCTAATTTACATATACTCTATTA
TTTTCTTTATTAGGATTCAAATGAGTCTCCACGAACTGAAGGGCGCTTTATAGATGGTGAAGAAGGTAATAAATGTGTTGTGTAGTTGAGTTTCCTGTTTTCTTTAGGTTGGCTTCGCTG
TTCAAATGTTATTACCATTTTTTACAACAATTTAATTTAGATTTTGCTAAAAAAATTTAACAATATTAATAAACCATAGCAAATATTAAAAGTACATGTACTAGTTTTTTCAATATTTTT
TTATATATAATAAACATTTTTTAATAAATTTTTATTTTTGCATCTTTAAACAGTAAGCAATGGCTAAAAAAATCAATTAAATTCTCCCTACAACTTAATTATAGCATACAATGTAATTTC
ATTACCTTAAACGTTGTTAACTATTCGTTCCGTTTATGTTTATAGCATACAAAAAGGTGAACAGCACCAATAGGTTGTGATTGTAATTTCTTCTTGGTAAAATGCGTAGTTCATTTCTGC
CTTATAATCTTGCTCCTTTGAGACACATTCTTGTAGAATTTCCTTAATTTTTCTAATATAAAGTTTAGAAATCTTTTGTAGAAACCTAGATACTTCACGTTATTTAAGTTAGATTTTGCC
TCTCATTTCATAATTTATCGACTTTTCCATATAATTGTCGTGTTATATATCTTATGAATGATGAATGATAATAATTTACTTTGCCCATGCATGCATGCTAAAAGTGTTTGGTTGCGCTCC
TCTGTTTATTTGTAATTTGGATTTAGTTTTTAAAAACATTTAATAGACATGGTTTTCTTTCTAACCATTACGTATTGTGTCTGAGATCATATCCAAAGTATTTGTAATCTTGACTTACAA
TTGTTATGAAATTCTTTCACATGGAAAAAATTCAGATGCCAGGAATTTAAGAAAAATCTTCTCTCGTATGGGTCTGAGTGACGAGCAAGACATTGTGGCTCTATGTGGTGGCCACACTTT
GTGATAAGAACGATGTATCCAAAAGTCTCCATGGTAAGAACGATAAATATATATTTATTATCCTAAAAAAACGATATATAATTTCATATCTATTCACTTTATTTGATAAGGGTGAGACAC
ATAAAGATCGCTCTAAGTTTGAAGAAGGAAAATCGACAAATAAACCTTTGAAGTTTGATAACTCCTATTTTAAAAGTAAGTTGTTTAATCACACGGTGACAATTGTTTGTTTATTTTAGA
AGTATAAAAATTGAAATTTCCCATAACACTAAACAGGGAACTATTGATTAAGGACGCATCCTTTTCGAGGCTTCCTATGGACTACGCTTTAGTAGAGGATCCAAAGTTCCATCACTATGT
TGAACGGTATGCAAGGGGTAACGACCATCCTATATAGAAGTTTAATGTAGTTAAAATTGATACATTTGGTAAAATTAGTAAATTACATTCATTAGACAAAATCAAAACAGTTCAAATTTC
AATCTCGTACATGAATTCAAATTCTGAATCGTTTAACTTTTATTCAATGATTATGATATCTTAACCTGCATCAACTGTGCTCATTTTTCTACAGTATTTAAGTCTCGATCTTAATTTTCA
ATTGTGATAGGATGAGGAAATTTTTTTCAAAGAATATGCAATCTCACATAAGAAACTCTCTGAGCTAGGCTTCAATCTCAATAATCTAGATCAGCCCAAGGGACCATATGCGAAGCTAAA
TCAGCACAAAGGACTCATAGGAATAGGTATAGCATCAGTTGTGGTGACCGTCATATTAGGTTATTTACTGAAGAGGAAGAAAAACCAATTGAAAAAT

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGGAACCTATTGTAGTTGACGAGGAGTATCGCAAGGAAATAGAAATGGCTCGACGAGAACTTGGCGTTTTCATCACCAACAATAAATGCGCCCCTCTCATGCTTCAATTTGCGTGG
AATGATGCTGCAACTTACGATGCCAAGAGCAGAAGAGGAGGCCCCAACGGTTCTATCAGATTAAGGATTGGACAAGAGTTGAAACACGAAGCAAACAAGGGATTGGAAAAAGCAGTTCAA
TACTGTGGTCAAACCAAACTTAAGCTTAAAAAAGTTTCATACGCGAACCTTTACCAGGTTTTAAGAAAAATCTTCTCTCGTATGGGTCTGAGTGACGAGCAAGACATTGTGGCTCTATGT
GGTGGCCACACTTTGGGTGAGACACATAAAGATCGCTCTAAGTTTGAAGAAGGAAAATCGACAAATAAACCTTTGAAGTTTGATAACTCCTATTTTAAGGAACTATTGATTAAGGACGCA
TCCTTTTCGAGGCTTCCTATGGACTACGCTTTAGTAGAGGATCCAAAGTTCCATCACTATGTTGAACGGTATGCAAGGGATGAGGAAATTTTTTTCAAAGAATATGCAATCTCACATAAG
AAACTCTCTGAGCTAGGCTTCAATCTCAATAATCTAGATCAGCCCAAGGGACCATATGCGAAGCTAAATCAGCACAAAGGACTCATAGGAATAGGTATAGCATCAGTTGTGGTGACCGTC
ATATTAGGTTATTTACTGAAGAGGAAGAAAAACCAATTGAAAAAT

Retrieve as FASTA