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Entry information : MePrx106 (cassava4.1_029175m)
Entry ID 9066
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2011-12-01 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-06 (Christophe Dunand)
Peroxidase information: MePrx106 (cassava4.1_029175m)
Name (synonym) MePrx106 (cassava4.1_029175m)
Class Class III peroxidase    [Orthogroup: Prx027]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot
Organism Manihot esculenta (cassava)    [TaxId: 3983 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MePrx106
start..stop		 S start..stop
RcPrx10 521 0 1..328 1..327
PtPrx29 518 0 1..328 1..327
PtPrx28 518 0 1..328 1..327
PtPrx77 508 0 1..328 1..327
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9066' 'complement(join(46661..47067,47163..47328,47409..47597,47672..47893))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 47672..47893 220 N° 2 47409..47597 187 N° 3 47163..47328 164 N° 4 46661..47067 405
complement(join(46661..47067,47163..47328,47409..47597,47672..47893))


exon

Literature and cross-references MePrx106 (cassava4.1_029175m)
DNA ref. Phytozome 12:   scaffold06906 (47893..46661)
Protein sequence: MePrx106 (cassava4.1_029175m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (304)
PWM (Da):   %s   36067.6 (33276.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   9.09 (9.43) Peptide Signal:   %s   cut: 25 range:25-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAVQKMIWVLFSQMILILFFLDFTNASGLKLGFYWRSCPNADQII
KTTLNKYIRRDPTLAAPLLRMHFHDCFVRGCDGSVLLNSKRGNQAEKEAIPNQTLRGFNVIDAVKSALEKKCPGVVSCADTLALVARDAVSMIGGPFWDVKTGRRDGRVSIASEALTQLPSPFANISELKQNFAVRGLNVKDLVVLSGG
HTIGIGHCFIISNRLYNFTGKGDTDPSLDPKYAAALKKKCKPGGDNKAIVEMDPGSFKTFDEDYYRIVAKRRGLFQSDAALLDDVETRAYVQLQSLTHGFTFAQDFADSMVKLGDVGVLT
GCQGEIRKRCTFV

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGTTCAAAAGATGATTTGGGTTTTGTTTTCTCAAATGATTCTCATTCTCTTTTTCTTAGATTTCACTAATGCAAGTGGTCTGAAACTAGGGTTCTACTGGAGGAGTTGCCCTAAT
GCAGACCAAATTATCAAAACAACTCTTAACAAATACATTAGAAGAGACCCAACTCTTGCTGCTCCTTTGTTGAGAATGCATTTCCATGATTGCTTCGTTAGGGTAAGTTTCTTATTGCTT
CTTTGATCAAAATCAATATACATGTGAAGCCGCCATGAACATGTAGCTGTTTGCAGGGGGATGTGACGGTTCTGTGCTATTAAATTCAAAGAGAGGCAATCAAGCTGAGAAAGAAGCAAT
CCCAAACCAAACCTTGAGAGGATTCAATGTGATTGATGCTGTGAAATCAGCACTAGAAAAGAAGTGTCCTGGTGTGGTTTCTTGCGCTGATACCTTAGCCTTAGTAGCTCGAGATGCAGT
TTCAATGGTAACTTGATGTTACTGTATATTAAATAAGCTGATACCTTAGCATTAAGCTTAATAAAAATGCTTTAATGTTTGTTTCAGATATTGGGGGACCATTTTGGGATGTTAAAACTG
GACGGAGAGATGGAAGAGTGTCAATTGCCTCGGAGGCTTTAACACAGCTGCCATCTCCTTTTGCCAACATAAGTGAGCTTAAACAAAATTTTGCTGTCAGGGGTTTAAATGTTAAGGACC
TTGTTGTTCTATCAGGTGACTACTTTCAGTTTATATATATAATACTCTGTCTCATTCGTATTTCTACAAGGACAATGTATAACAAAAGTTATATAAATTTTGTGTTGCAGGAGAGGACAC
ACCATTGGCATTGGGCATTGCTTTATAATATCAAACCGCTTATACAATTTCACAGGCAAAGGCGACACTGACCCATCACTAGACCCCAAATACGCAGCAGCATTGAAGAAAAAGTGCAAG
CCAGGAGGAGACAACAAGGCAATTGTGGAAATGGACCCTGGAAGCTTCAAAACATTTGATGAAGATTACTACAGAATTGTGGCTAAACGAAGAGGGCTCTTCCAATCTGATGCAGCTCTT
CTTGATGATGTTGAAACCAGAGCTTATGTCCAGCTTCAGTCTCTCACCCATGGATTCACTTTTGCTCAAGATTTTGCTGATTCAATGGTTAAACTTGGTGATGTTGGCGTCCTCACTGGC
TGCCAAGGTGAAATCAGGAAACGCTGCACTTTCGTCAAT

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGTTCAAAAGATGATTTGGGTTTTGTTTTCTCAAATGATTCTCATTCTCTTTTTCTTAGATTTCACTAATGCAAGTGGTCTGAAACTAGGGTTCTACTGGAGGAGTTGCCCTAAT
GCAGACCAAATTATCAAAACAACTCTTAACAAATACATTAGAAGAGACCCAACTCTTGCTGCTCCTTTGTTGAGAATGCATTTCCATGATTGCTTCGTTAGGGGATGTGACGGTTCTGTG
CTATTAAATTCAAAGAGAGGCAATCAAGCTGAGAAAGAAGCAATCCCAAACCAAACCTTGAGAGGATTCAATGTGATTGATGCTGTGAAATCAGCACTAGAAAAGAAGTGTCCTGGTGTG
GTTTCTTGCGCTGATACCTTAGCCTTAGTAGCTCGAGATGCAGTTTCAATGATTGGGGGACCATTTTGGGATGTTAAAACTGGACGGAGAGATGGAAGAGTGTCAATTGCCTCGGAGGCT
TTAACACAGCTGCCATCTCCTTTTGCCAACATAAGTGAGCTTAAACAAAATTTTGCTGTCAGGGGTTTAAATGTTAAGGACCTTGTTGTTCTATCAGGAGGACACACCATTGGCATTGGG
CATTGCTTTATAATATCAAACCGCTTATACAATTTCACAGGCAAAGGCGACACTGACCCATCACTAGACCCCAAATACGCAGCAGCATTGAAGAAAAAGTGCAAGCCAGGAGGAGACAAC
AAGGCAATTGTGGAAATGGACCCTGGAAGCTTCAAAACATTTGATGAAGATTACTACAGAATTGTGGCTAAACGAAGAGGGCTCTTCCAATCTGATGCAGCTCTTCTTGATGATGTTGAA
ACCAGAGCTTATGTCCAGCTTCAGTCTCTCACCCATGGATTCACTTTTGCTCAAGATTTTGCTGATTCAATGGTTAAACTTGGTGATGTTGGCGTCCTCACTGGCTGCCAAGGTGAAATC
AGGAAACGCTGCACTTTCGTCAAT

Retrieve as FASTA