View Redoxidase 9091

Entry information : MePrx134 (cassava4.1_032385m)

Entry ID	9091
Creation	2011-07-01 (Qiang Li)
Last sequence changes	2011-12-02 (Qiang Li)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-01-05 (Qiang LI)

Peroxidase information: MePrx134 (cassava4.1_032385m)

Name (synonym)

MePrx134 (cassava4.1_032385m)

Class

Class III peroxidase [Orthogroup: Prx003]

Taxonomy

Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot

Organism

Manihot esculenta (cassava) [TaxId: 3983 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	MePrx134 start..stop	S start..stop
RcPrx75	518	0	9..331	5..328
MePrx32	509	0	16..331	5..321
MePrx31	501	1.36e-180	16..331	5..321
RcPrx54	500	2.63e-180	14..331	4..324

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9091' 'join(96785..97204,97471..97633,97844..98256)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	96785..97204	418	N° 2	97471..97633	161	N° 3	97844..98256	411
join(96785..97204,97471..97633,97844..98256)

Literature and cross-references MePrx134 (cassava4.1_032385m)

DNA ref.	Phytozome 12: scaffold07873 (96785..98256)

Protein sequence: MePrx134 (cassava4.1_032385m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	332 (300)
PWM (Da):	35546.91 (31993.1)	Transmb domain:	i13-35o
PI (pH):	8.01 (8.21)	Peptide Signal:	cut: 33 range:33-332

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MEIHSSFASSSQTHILILMFIWVLMSGTLVHGQGTRVGFYATSCP
RAESIVSTTVARHFRSNAAIAPGLLRMHFHDCFVRGCDASVLIDGSNTEKTAPPNLGLKGFEVIDDAKTQLEAAC
PGIVSCSDILALAARDSVVLTGGGSWLVPTGRRDGRVTSASETTDLPGFRESIDAQKQKFSAKGLNTQDLVVLVGGHTIGTTACQFFSYRLYNFNSTSTSDPSINPSFLPQLKALCPQNG
DGTKRVALDTDSSNRFDATFFDNLRNGRGILESDQKLWTDASTRIVVQRFVGLGGLVAFNAEFGRSMVKMSNIGVKTGSDGEIRKICSAIN

Retrieve as FASTA

Remarks

Complete sequence from genomic. Incorrect prediction from phytozome (5' end is missing).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGAGATACACTCTAGCTTTGCTTCTTCAAGCCAAACCCACATTTTAATATTAATGTTCATCTGGGTTTTAATGTCTGGGACCTTAGTGCATGGCCAAGGGACTCGTGTTGGATTCTAT
GCTACATCATGTCCTAGAGCTGAATCCATTGTAAGCACAACGGTTGCTAGGCATTTTCGATCTAATGCAGCCATTGCTCCTGGTTTGCTGAGGATGCATTTCCATGATTGCTTTGTACGA
GGATGTGATGCTTCTGTCCTTATTGATGGTTCCAATACTGAGAAAACTGCACCACCAAATCTTGGGTTGAAAGGCTTTGAAGTTATTGACGATGCCAAAACTCAGCTTGAAGCTGCATGT
CCTGGAATTGTTTCTTGCTCTGATATTCTTGCACTTGCTGCCCGTGACTCTGTCGTTCTGTGGTAATCATCACATCCAATAATTACCGTAAAAGTTATTATACACACGTCACTACTAAAA
CACTACTGATAATTCGTATTTAACTTCATATATTTTTTAAAATTCTTAACGGTATATAAAGCATGAAGTAAATATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTAAAGGTAGCTTCTTTTAAATTTCATGCAGACTGGAGGAGGAAGTTGGCTGGTGCCCACTGG
ACGTAGAGACGGCCGAGTGACATCAGCATCTGAAACAACAGATTTGCCTGGCTTCAGAGAATCCATTGATGCCCAAAAGCAAAAGTTCTCTGCAAAAGGTCTCAACACACAAGACCTTGT
TGTACTTGTCGCGGTAAGCTTTAAATACTTCCCGGACCGTCCACCATGAATCAAAACACTGATAAATGAGTTTGTAAAAGAAAAAAATAATAGATGTGACGACTTGAATATCTGTTGATC
TATGGAGAACCGGATCTTCTTAAAAACTTACGTAGGCTACTCTCATTTTACACTATGAATCAATATGGACCTGACAATAATTTTGCGTCTTGTAATACTACAGGAGGCCACACCATAGGA
ACAACAGCTTGCCAGTTCTTTAGTTACAGATTATACAACTTCAACTCCACCTCAACTTCTGATCCTTCCATTAACCCTTCATTTCTTCCTCAACTAAAAGCACTGTGTCCACAGAATGGA
GATGGAACAAAGAGAGTTGCTTTAGACACAGACAGTTCAAACAGATTTGATGCAACTTTCTTCGACAACCTCAGAAATGGCCGAGGAATACTTGAGTCTGATCAGAAACTGTGGACTGAT
GCTTCTACAAGAATCGTTGTTCAACGATTCGTGGGTCTTGGTGGTTTGGTTGCATTCAATGCTGAGTTTGGAAGGTCCATGGTTAAGATGAGTAATATTGGAGTGAAGACAGGCAGTGAT
GGTGAAATTAGAAAAATATGTTCTGCAATAAACTCA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA