View Redoxidase 9115

Entry information : MePrx53(Manes.08G043700 / cassava4.1_015974m)

Entry ID	9115
Creation	2011-07-01 (Qiang Li)
Last sequence changes	2011-10-03 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2019-08-22 (Christophe Dunand)

Peroxidase information: MePrx53(Manes.08G043700 / cassava4.1_015974m)

Name

MePrx53(Manes.08G043700 / cassava4.1_015974m)

Class

Class III peroxidase [Orthogroup: Prx004]

Taxonomy

Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot

Organism

Manihot esculenta (cassava) [TaxId: 3983 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	MePrx53 start..stop	S start..stop
RcPrx16	557	0	3..334	5..335
PpePrx07	546	0	14..333	11..332
PtPrx72	537	0	4..334	2..331
PbPrx72	537	0	4..334	2..331

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9115' 'join(68493..68720,68809..69000,69139..69304,69385..69800)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	68493..68720	226	N° 2	68809..69000	190	N° 3	69139..69304	164	N° 4	69385..69800	414
join(68493..68720,68809..69000,69139..69304,69385..69800)

Literature and cross-references MePrx53(Manes.08G043700 / cassava4.1_015974m)

DNA ref.	Phytozome 12: scaffold00823 (68493..69800)

Protein sequence: MePrx53(Manes.08G043700 / cassava4.1_015974m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	334 (305)
PWM (Da):	34824.2 (31817.5)
PI (pH):	5.61 (4.60)	Peptide Signal:	cut: 30 range:30-334

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MRSSKTTSASSMVLPIVLAALLLVHKSNAQLSSTFYATTCSNVSA
IVTSVVQQALQSDPRIGASLIRLHFHDCFVNGCDASLLLDNSSTILSEKFAAPNVNSARGFDVVDNIKTAVENSCPGVVSCADILALAAEASVSLSGGQSWSVLLGRRDSLTANQAGANTSIPSPFEGLNNITSKFSAVGLNTNDLVALSG
AHTFGRAQCRTFSNRLFNFSGTGSPDPTLNATYLTTLQQLCPQGGSGATLANLDPTTPDNFDNNYFTNLQNNQGLLQSDQELFSTAGAATVSIVNSFSSSQTAFFQSFAQSMINMGNISP
LTGTNGEIRADCKKVNG

Retrieve as FASTA

Remarks

Complete sequence from genomic.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCGTTCTTCTAAAACGACAAGTGCTAGTTCTATGGTGCTGCCAATTGTTTTGGCAGCACTACTACTGGTGCACAAATCTAATGCTCAATTAAGTTCTACGTTCTATGCTACAACATGC
TCTAATGTTTCTGCCATTGTTACTAGTGTTGTTCAACAAGCCCTTCAATCCGATCCCCGGATCGGCGCCAGCCTCATTCGCCTTCATTTTCATGATTGCTTTGTCAATATGTAAATCCAA
TCCAATTTCTACGAACTAGCTAGATTCCCAGATTTAAATTAAACTAACGTTTTTTTCTTTTTTTGAAATTGGTAACAGGGATGCGATGCTTCACTTTTGCTAGACAATAGTTCAACCATA
CTGAGCGAGAAATTTGCAGCTCCAAACGTTAACTCCGCTCGGGGTTTTGATGTCGTTGACAATATCAAAACTGCCGTCGAAAATTCTTGCCCTGGTGTTGTCTCTTGCGCTGATATTCTC
GCACTCGCAGCTGAAGCTTCTGTTTCTCTTTTGTAAGTCATATATCAATCTCCGCCGAAACCTTACAGCTCATGTTATTACTTAGCAAGAGTTTAGTGGCGTGTATAAGTTTTTCTGCAA
TACATAAATGAAAATTTTCCTAGAATGAAAATGAGCTTTGATGCTTCCAGTCAGGAGGACAATCGTGGAGTGTTCTGCTGGGAAGAAGAGATAGTCTCACAGCAAATCAGGCTGGAGCAA
ATACATCGATTCCTTCTCCTTTTGAAGGTCTAAACAACATTACTTCCAAATTCTCTGCAGTGGGTCTGAACACTAATGATCTTGTGGCATTATCAGAGGTGATTCCCGTGAAAAAACTTG
GTTTAAATCCTTAAGAAAATTCTATCCTGAAATGGGATTTTGAATCTGAAATTTGCAGGAGCTCACACATTTGGACGTGCTCAATGTCGAACATTCAGCAACAGGCTGTTCAATTTCAGC
GGCACAGGCAGCCCAGACCCAACATTGAACGCAACTTACTTAACTACGCTGCAACAGTTATGTCCACAGGGTGGCAGTGGAGCGACTCTGGCGAACCTTGATCCGACGACGCCGGATAAT
TTTGACAATAACTATTTCACAAACCTGCAGAACAATCAGGGGCTTCTGCAATCTGATCAGGAGCTGTTTTCGACGGCAGGGGCTGCGACGGTCTCCATTGTTAACAGCTTTAGCAGTAGC
CAAACTGCTTTCTTCCAGAGCTTTGCTCAGTCCATGATTAATATGGGAAACATTAGTCCATTAACTGGAACTAATGGGGAGATTAGAGCAGATTGTAAGAAGGTGAATGGAAGT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCGTTCTTCTAAAACGACAAGTGCTAGTTCTATGGTGCTGCCAATTGTTTTGGCAGCACTACTACTGGTGCACAAATCTAATGCTCAATTAAGTTCTACGTTCTATGCTACAACATGC
TCTAATGTTTCTGCCATTGTTACTAGTGTTGTTCAACAAGCCCTTCAATCCGATCCCCGGATCGGCGCCAGCCTCATTCGCCTTCATTTTCATGATTGCTTTGTCAATGGATGCGATGCT
TCACTTTTGCTAGACAATAGTTCAACCATACTGAGCGAGAAATTTGCAGCTCCAAACGTTAACTCCGCTCGGGGTTTTGATGTCGTTGACAATATCAAAACTGCCGTCGAAAATTCTTGC
CCTGGTGTTGTCTCTTGCGCTGATATTCTCGCACTCGCAGCTGAAGCTTCTGTTTCTCTTTCAGGAGGACAATCGTGGAGTGTTCTGCTGGGAAGAAGAGATAGTCTCACAGCAAATCAG
GCTGGAGCAAATACATCGATTCCTTCTCCTTTTGAAGGTCTAAACAACATTACTTCCAAATTCTCTGCAGTGGGTCTGAACACTAATGATCTTGTGGCATTATCAGGAGCTCACACATTT
GGACGTGCTCAATGTCGAACATTCAGCAACAGGCTGTTCAATTTCAGCGGCACAGGCAGCCCAGACCCAACATTGAACGCAACTTACTTAACTACGCTGCAACAGTTATGTCCACAGGGT
GGCAGTGGAGCGACTCTGGCGAACCTTGATCCGACGACGCCGGATAATTTTGACAATAACTATTTCACAAACCTGCAGAACAATCAGGGGCTTCTGCAATCTGATCAGGAGCTGTTTTCG
ACGGCAGGGGCTGCGACGGTCTCCATTGTTAACAGCTTTAGCAGTAGCCAAACTGCTTTCTTCCAGAGCTTTGCTCAGTCCATGATTAATATGGGAAACATTAGTCCATTAACTGGAACT
AATGGGGAGATTAGAGCAGATTGTAAGAAGGTGAATGGAAGT

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCACTAGC CAAAAATTAG AAACCACTAA TTTGAAGGCT TTTGATTTTG CTGAAAGAAA CGACAATGCG TTCTTCTAAA ACGACAAGTG CTAGTTCTAT GGTGCTGCCA ATTGTTTTGG CAGCACTACT ACTGGTGCAC AAATCTAATG CTCAATTAAG TTCTACGTTC TATGCTACAA CATGCTCTAA TGTTTCTGCC ATTGTTACTA GTGTTGTTCA ACAAGCCCTT CAATCCGATC CCCGGATCGG CGCCAGCCTC ATTCGCCTTC ATTTTCATGA TTGCTTTGTC AATGGATGCG ATGCTTCACT TTTGCTAGAC AATAGTTCAA CCATACTGAG CGAGAAATTT GCAGCTCCAA ACGTTAACTC CGCTCGGGGT TTTGATGTCG TTGACAATAT CAAAACTGCC GTCGAAAATT CTTGCCCTGG TGTTGTCTCT TGCGCTGATA TTCTCGCACT CGCAGCTGAA GCTTCTGTTT CTCTTTCAGG AGGACAATCG TGGAGTGTTC TGCTGGGAAG AAGAGATAGT CTCACAGCAA ATCAGGCTGG AGCAAATACA TCGATTCCTT CTCCTTTTGA AGGTCTAAAC AACATTACTT CCAAATTCTC TGCAGTGGGT CTGAACACTA ATGATCTTGT GGCATTATCA GGAGCTCACA CATTTGGACG TGCTCAATGT CGAACATTCA GCAACAGGCT GTTCAATTTC AGCGGCACAG GCAGCCCAGA CCCAACATTG AACGCAACTT ACTTAACTAC GCTGCAACAG TTATGTCCAC AGGGTGGCAG TGGAGCGACT CTGGCGAACC TTGATCCGAC GACGCCGGAT AATTTTGACA ATAACTATTT CACAAACCTG CAGAACAATC AGGGGCTTCT GCAATCTGAT CAGGAGCTGT TTTCGACGGC AGGGGCTGCG ACGGTCTCCA TTGTTAACAG CTTTAGCAGT AGCCAAACTG CTTTCTTCCA GAGCTTTGCT CAGTCCATGA TTAATATGGG AAACATTAGT CCATTAACTG GAACTAATGG GGAGATTAGA GCAGATTGTA AGAAGGTGAA TGGAAGTTAG GCTGTGGGGT TGATTGTCAC ATCATGACAA GTTCAGGGTC CTTTTTCTAA ATAAAAAAAA TCTGAGGTAT TTAAAAGAAG ATTATAAGGA GATGTTTTAT GATTTTAAAG GGTGAAGTAG GACTAAGATT
TAGATATGGA GGTGCTGCCA ATGCAATTTG TAAAAGTATT GTGAAAGTTT GTATTAGATT TGTTTCGTAT TTATTTATTA AAGCCTTGTG GATTAGTTC

Retrieve as FASTA