Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
324 (301) |
PWM (Da): |
34608.1 (32058.7) |
Transmb domain: |
o10-32i |
PI (pH): |
4.37 (4.30) |
Peptide Signal: |
cut: 24 range:24-324 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MRVPIATFLVLIFVTVFEKGCNAQLSTTFYATTCPNISSVVLNVI QQAQRADVRAAPKLIRLHFHDCFVDGCDGSLLLDNADGILSEKDAFPNAGSVDGFGIVDNMKTALESVCPGVVSCADILALASQISVNLVGGPSYSVPLGRRDGRTANRAGANTELPSPFANLDELRSNFSAKGLDSTDLVALSG AHTFGRAKCNTFSHRLYNFANSGGPDQTIEPTYLETLRQTCPQNGAGTTLENLDQSTPDEFDNEYFENLQSGKGLLQTDQLLFSSTGSDTVAIVDRFGDSETEFFDAFVRSIIKMGNIAP LTGTQGEIRADCK |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic. Incorrect prediction from phytozome (5' end is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAGAGTGCCAATAGCAACTTTTCTCGTGCTGATATTCGTAACTGTGTTCGAAAAAGGATGCAACGCTCAGTTGAGCACCACATTCTACGCTACCACGTGCCCTAATATATCGAGCGTG GTTCTTAATGTCATCCAACAGGCTCAACGGGCTGATGTTCGGGCTGCCCCTAAACTTATTCGCCTTCATTTCCATGATTGCTTCGTCGATGTAAATTTTCCATCTCTATTTTTTCCCTCT TTTTTTCTAGGGTTATTAGGGATCGGCATGCATGTGTTAAAATCTAGAAGAGCCACAAATATATATATATGTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTTCCCGATATGTACATATCGA AATTTATAAAAATTAGTGTTAATAAACAATAACAATAGACAATTAGTTAATATTGTCTCCGAAATCTCAGGATGGATATTCCGGTGGTTATATATTTGAATGGGTGAAGTACTAATTTGT TTGTGTTCATTCGTCAGGGGGCTGCGATGGATCGCTTTTGCTAGACAATGCAGACGGCATACTCAGCGAAAAAGACGCGTTCCCGAATGCTGGTTCTGTCGACGGATTCGGTATAGTAGA TAACATGAAAACAGCCTTGGAGAGTGTGTGCCCAGGTGTGGTCTCGTGTGCAGATATTTTGGCACTAGCTTCTCAAATTTCAGTTAACTTGGTAACTACATACAAATAATTAATCTTTAT TTCATGCGCATAAGTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATATGGTATTANNNNNNNNNNN NNNNNNNNNNNGGTGTAGGAGGTCCATCATATTCAGTACCACTAGGAAGAAGAGATGGCAGAACAGCAAACAGAGCAGGGGCAAATACGGAACTTCCAAGCCCTTTTGCCAACCTTGATG AACTCCGATCCAATTTCAGCGCCAAGGGTCTCGACTCTACTGACTTGGTCGCTCTATCAGGTATACTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTATC ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTACAAGATGAAATATTAATCATGAAAAAACA CAAATCCAAATTCAAGATTTTGAATACATATTTTTACTATATGGTGCAACTCAGACTTGCACTAGACGTTATTTTTGTTCCTCATATTCGTCTTATAAGTAAAATACTAATCCTTTTTTT TTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAG TATATATATCGTAATCTCAGGTGTGCGCATACATTTGGGCGTGCAAAATGCAACACATTCAGCCACAGGCTCTACAACTTCGCCAACTCCGGTGGGCCCGACCAAACCATAGAACCTACT TACCTGGAAACGTTGCGACAAACGTGCCCTCAAAACGGCGCCGGAACCACCTTAGAAAATCTTGACCAGTCAACGCCCGACGAATTCGACAACGAATACTTTGAAAATCTGCAGAGCGGG AAAGGCCTTCTTCAGACCGATCAACTATTGTTCTCTTCTACTGGATCCGATACAGTTGCTATTGTTGACCGGTTCGGTGATAGCGAAACCGAGTTTTTCGATGCTTTCGTCCGGTCCATT ATTAAAATGGGCAACATTGCCCCGCTCACCGGAACTCAGGGAGAGATCCGAGCTGATTGCAAGAGG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAGAGTGCCAATAGCAACTTTTCTCGTGCTGATATTCGTAACTGTGTTCGAAAAAGGATGCAACGCTCAGTTGAGCACCACATTCTACGCTACCACGTGCCCTAATATATCGAGCGTG GTTCTTAATGTCATCCAACAGGCTCAACGGGCTGATGTTCGGGCTGCCCCTAAACTTATTCGCCTTCATTTCCATGATTGCTTCGTCGATGGCTGCGATGGATCGCTTTTGCTAGACAAT GCAGACGGCATACTCAGCGAAAAAGACGCGTTCCCGAATGCTGGTTCTGTCGACGGATTCGGTATAGTAGATAACATGAAAACAGCCTTGGAGAGTGTGTGCCCAGGTGTGGTCTCGTGT GCAGATATTTTGGCACTAGCTTCTCAAATTTCAGTTAACTTGGTAGGAGGTCCATCATATTCAGTACCACTAGGAAGAAGAGATGGCAGAACAGCAAACAGAGCAGGGGCAAATACGGAA CTTCCAAGCCCTTTTGCCAACCTTGATGAACTCCGATCCAATTTCAGCGCCAAGGGTCTCGACTCTACTGACTTGGTCGCTCTATCAGGTGCGCATACATTTGGGCGTGCAAAATGCAAC ACATTCAGCCACAGGCTCTACAACTTCGCCAACTCCGGTGGGCCCGACCAAACCATAGAACCTACTTACCTGGAAACGTTGCGACAAACGTGCCCTCAAAACGGCGCCGGAACCACCTTA GAAAATCTTGACCAGTCAACGCCCGACGAATTCGACAACGAATACTTTGAAAATCTGCAGAGCGGGAAAGGCCTTCTTCAGACCGATCAACTATTGTTCTCTTCTACTGGATCCGATACA GTTGCTATTGTTGACCGGTTCGGTGATAGCGAAACCGAGTTTTTCGATGCTTTCGTCCGGTCCATTATTAAAATGGGCAACATTGCCCCGCTCACCGGAACTCAGGGAGAGATCCGAGCT GATTGCAAGAGG |
Retrieve as FASTA
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