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Entry information : RcPrx23 (29726.m003965)
Entry ID 9351
Creation 2011-06-30 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: RcPrx23 (29726.m003965)
Name (synonym) RcPrx23 (29726.m003965)
Class Class III peroxidase    [Orthogroup: Prx011]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus
Organism Ricinus communis    [TaxId: 3988 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcPrx23
start..stop		 S start..stop
MePrx72 496 5.8e-179 1..326 1..325
MePrx86 495 2.4e-178 1..326 1..333
EgrPrx126 452 1.9e-161 24..325 21..326
EguPrx126 452 1.92e-161 24..325 21..326
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9351' 'complement(join(465055..465458,465601..465766,465864..466052,466164..466382))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 466164..466382 217 N° 2 465864..466052 187 N° 3 465601..465766 164 N° 4 465055..465458 402
complement(join(465055..465458,465601..465766,465864..466052,466164..466382))


exon

Literature and cross-references RcPrx23 (29726.m003965)
DNA ref. Phytozome 12:   29726 (466382..465055)
Protein sequence: RcPrx23 (29726.m003965)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (301)
PWM (Da):   %s   35198.83 (32732.5) Transmb domain:   %s   i7-29o
PI (pH):   %s   5.72 (5.71) Peptide Signal:   %s   cut: 26 range:26-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MMARDGILIAISSLLVLAAVGVSNADGLSLRFYNTSCPDAELIVR
NITRNRAQSDSALGAKLLRMHFHDCFVRGCDASILLDAVGIQSEKDTIPNQSLSGFDVIDEIKTQLEQVCPGVVSCADILALASRDAVSLSFQKPLWDVLTGRRDGTVSLASEVNGNIPSPFADFNTLMQQFSNKGLDVNDLVVLSGG
HTIGVAHCATFTNRLYNFTGIGDMDPSLDKTYAELLKTKCPNPSNPATTVEMDPQSSLTFDKNYYDILLQNKGLFQSDAALLENTQSARIVRQLKTSNAFFAKFAISMKKMGAIEVLTGN
AGQIRQNCRVVN

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGGCTAGAGATGGTATATTGATTGCAATATCGTCACTTCTTGTTCTTGCAGCTGTTGGGGTTTCTAATGCTGATGGTTTGAGCCTGCGTTTCTACAACACAAGTTGCCCAGATGCT
GAGCTGATTGTGAGGAACATCACAAGGAATAGAGCTCAAAGTGACTCAGCTTTGGGTGCTAAACTTTTAAGAATGCACTTCCATGACTGTTTTGTTAGGGTATATTTGCCTTAATCTATC
ATTATGCATGTATTCGTAAAGCTAGCAACATGTATATGTTATACTTATTGCATTTTAATTAACATTTTCTAACTGTATTATATGTGGCAGGGGGGTGCGATGCATCCATACTGTTGGATG
CAGTTGGAATTCAATCTGAGAAAGATACAATTCCTAATCAATCACTGTCAGGTTTCGATGTCATTGATGAAATTAAGACTCAACTCGAGCAAGTTTGCCCTGGAGTTGTTTCATGTGCAG
ACATTCTGGCCTTGGCATCTCGTGATGCTGTTTCGTTATCGGTAAGCAATTAGTCCTGACCAATTATATGCATATATATATATATATATTTCTCTTCATAATTATGCATGTAACATACAA
TATGCATGTTGATAGCAGTTTTCCAGAAGCCATTATGGGATGTCTTAACTGGAAGAAGGGATGGCACAGTTTCTCTAGCATCTGAAGTCAATGGAAACATTCCTTCCCCATTCGCAGATT
TCAACACTCTCATGCAACAATTTTCCAACAAGGGTCTTGATGTCAATGACCTTGTGGTTCTCTCAGGTTTGAATCAAAGATATTTTTAATTTTCATTCAAATTTGAAACTATGGCATTGA
TAATCATATAAATTATATATTTTGTAACGCTTTGTATCAAGATCTGATTGGTACCCGGCTGATACAGTTTGATTTAAATTTTGAGCAGGTGTGGACATACTATAGGTGTTGCTCACTGTG
CCACATTTACAAATAGACTGTATAACTTCACAGGCATTGGAGATATGGATCCTTCTCTAGATAAAACCTATGCAGAGTTGTTGAAAACCAAATGTCCGAATCCATCAAATCCAGCAACAA
CTGTGGAGATGGATCCTCAAAGCTCACTCACATTTGACAAGAATTACTACGATATTCTTCTTCAAAACAAGGGCCTTTTTCAGTCTGATGCTGCATTACTCGAAAATACACAATCTGCCA
GGATAGTTCGACAGCTGAAGACATCAAATGCCTTTTTCGCTAAGTTTGCTATATCGATGAAGAAAATGGGAGCTATTGAAGTGCTTACAGGAAATGCTGGACAGATCAGGCAGAACTGCC
GTGTAGTAAATCCA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGGCTAGAGATGGTATATTGATTGCAATATCGTCACTTCTTGTTCTTGCAGCTGTTGGGGTTTCTAATGCTGATGGTTTGAGCCTGCGTTTCTACAACACAAGTTGCCCAGATGCT
GAGCTGATTGTGAGGAACATCACAAGGAATAGAGCTCAAAGTGACTCAGCTTTGGGTGCTAAACTTTTAAGAATGCACTTCCATGACTGTTTTGTTAGGGGGTGCGATGCATCCATACTG
TTGGATGCAGTTGGAATTCAATCTGAGAAAGATACAATTCCTAATCAATCACTGTCAGGTTTCGATGTCATTGATGAAATTAAGACTCAACTCGAGCAAGTTTGCCCTGGAGTTGTTTCA
TGTGCAGACATTCTGGCCTTGGCATCTCGTGATGCTGTTTCGTTATCGTTCCAGAAGCCATTATGGGATGTCTTAACTGGAAGAAGGGATGGCACAGTTTCTCTAGCATCTGAAGTCAAT
GGAAACATTCCTTCCCCATTCGCAGATTTCAACACTCTCATGCAACAATTTTCCAACAAGGGTCTTGATGTCAATGACCTTGTGGTTCTCTCAGGTGGACATACTATAGGTGTTGCTCAC
TGTGCCACATTTACAAATAGACTGTATAACTTCACAGGCATTGGAGATATGGATCCTTCTCTAGATAAAACCTATGCAGAGTTGTTGAAAACCAAATGTCCGAATCCATCAAATCCAGCA
ACAACTGTGGAGATGGATCCTCAAAGCTCACTCACATTTGACAAGAATTACTACGATATTCTTCTTCAAAACAAGGGCCTTTTTCAGTCTGATGCTGCATTACTCGAAAATACACAATCT
GCCAGGATAGTTCGACAGCTGAAGACATCAAATGCCTTTTTCGCTAAGTTTGCTATATCGATGAAGAAAATGGGAGCTATTGAAGTGCTTACAGGAAATGCTGGACAGATCAGGCAGAAC
TGCCGTGTAGTAAATCCA

Retrieve as FASTA