Entry information : RcPrx47 (29863.m001076)
Entry ID 9372
Creation 2011-06-30 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: RcPrx47 (29863.m001076)
Name (synonym) RcPrx47 (29863.m001076)
Class Class III peroxidase    [Orthogroup: Prx005]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus
Organism Ricinus communis    [TaxId: 3988 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcPrx47
start..stop
S start..stop
MePrx09 598 0 9..353 6..351
EcPrx01 590 0 8..353 3..347
RcPrx11 577 0 19..353 20..354
NnPrx26 512 0 20..350 25..356
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9372' 'join(260394..260639,261048..261242,261347..261964)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 260394..260639 244 N° 2 261048..261242 193 N° 3 261347..261964 616  
join(260394..260639,261048..261242,261347..261964)


exon

Literature and cross-references RcPrx47 (29863.m001076)
DNA ref. Phytozome 12:   29863 (260394..261964)
Protein sequence: RcPrx47 (29863.m001076)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   353 (326)
PWM (Da):   %s   38573.82 (35832.4) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.9 (8.20) Peptide Signal:   %s   cut: 28 range:28-353
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASANSFTSLLLISCLLLAACFSAIEAQTKPPIKNGLSWTFYKTS
CPKAESIIRSELKKIFKKDVGQAAGLLRLHFHDCFVL
GCDSSVLLDGSAGGPSEKSELPNLTLRKQAFKIVEDLRARLHKECGRVVSCSDIVAIAARDSVVLTGGPEYAIPLGRRDGVKFAEINATFEHLVGPTAKVTEILTKLDRKGLDATDAVAL
SGGHTIGIGHCTSFTERLYPSQDPTMDKTFANNLKLTCPKLDTTNTTFLDIRSPNKFDNKYYVDLMNRQGLFTSDQDLYTDKRTRSIVTSFAINESLFFEKFIIGMIKMGQLDVLTGNQG
EIRANCSAINPKKKYIESVAEEELGSSSEMR

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAGTGCTAACTCTTTCACTTCTCTCCTTTTGATATCCTGTCTCTTACTAGCTGCTTGCTTTTCTGCCATTGAAGCACAAACCAAACCTCCCATCAAGAATGGTCTGTCATGGACA
TTCTACAAAACTAGCTGTCCCAAAGCCGAATCTATTATCAGAAGTGAGCTCAAGAAAATCTTCAAGAAAGATGTTGGCCAAGCTGCTGGCTTGCTTCGCCTCCACTTCCATGACTGCTTT
GTTCTG
TGGTAACTATTCTTATTCTTCTTTCTTTTCTCTACCTTTCTTGTTCCTGCATGTGCTTGCTGAATTTCTTATAATTTCTATAACTTACAGAGTGTTTTACAAAACAGAAAGTCT
CATGCACTTGCACACACACTTAAATGAGCTTCTAGCTCTTGGTCATAATGCATGCTATATATATCAGTTTCTTGATATTGCTAGCTTCAATTTATCTTGTGCCTTTTACTTGTTTACTTT
ATCTTGACGGTACCTGTAGCTAAGCATATAATGACAGTAAATTCATGTTAAAAGAAACAGCAAATGTAATCTTTTTATTTTTATTTCTATAGCTTTTGTCGCTGTCTCAATAAATTTTTC
TTTTATATTCTTGGTGAGTTGCCGTATTGTTAATGGATATACATGATGAATTATAGGGATGTGACTCGTCGGTGCTGCTTGATGGATCAGCAGGTGGACCCAGCGAGAAGTCTGAACTTC
CTAACTTGACTTTAAGAAAACAGGCTTTTAAAATCGTCGAGGATCTTCGAGCACGTCTTCACAAGGAGTGTGGCAGAGTCGTGTCTTGCTCTGACATTGTTGCCATCGCTGCTCGTGACT
CCGTTGTCCTG
TGGTGATTAATTAAAATAATGTTACCTGTTAATTATTTTCAAGAAAAAACTCCTGCACTAGGGTAAGTATGATTTGCTAATATTCAAGTTTCTTGTGAAACTGCAGACG
GGCGGCCCTGAGTATGCCATCCCACTGGGAAGGAGAGACGGTGTAAAGTTTGCAGAGATTAATGCAACATTTGAACACCTTGTAGGACCAACAGCCAAAGTTACTGAGATTCTCACCAAG
CTTGACAGGAAAGGCCTGGATGCTACCGATGCAGTTGCCCTTTCAGGTGGCCACACAATCGGCATTGGCCACTGCACTTCTTTCACTGAGCGTCTCTATCCGAGTCAAGATCCTACAATG
GACAAGACTTTTGCTAACAATCTCAAGCTAACTTGTCCCAAACTAGACACCACCAACACTACCTTCTTGGACATAAGGTCTCCTAACAAATTCGACAACAAGTACTATGTTGATCTAATG
AACCGTCAAGGTCTGTTTACTTCGGATCAAGATTTGTACACGGACAAGAGGACAAGGAGCATTGTTACTAGCTTTGCTATTAACGAATCTCTGTTCTTCGAGAAGTTTATAATTGGCATG
ATCAAGATGGGGCAATTAGATGTGTTGACAGGAAACCAAGGGGAGATTCGTGCTAACTGCTCGGCCATTAATCCCAAGAAGAAATATATTGAGTCTGTCGCGGAAGAGGAATTGGGTTCA
TCGTCTGAGATGAGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTAGTGCTAACTCTTTCACTTCTCTCCTTTTGATATCCTGTCTCTTACTAGCTGCTTGCTTTTCTGCCATTGAAGCACAAACCAAACCTCCCATCAAGAATGGTCTGTCATGGACA
TTCTACAAAACTAGCTGTCCCAAAGCCGAATCTATTATCAGAAGTGAGCTCAAGAAAATCTTCAAGAAAGATGTTGGCCAAGCTGCTGGCTTGCTTCGCCTCCACTTCCATGACTGCTTT
GTTCTG
GGATGTGACTCGTCGGTGCTGCTTGATGGATCAGCAGGTGGACCCAGCGAGAAGTCTGAACTTCCTAACTTGACTTTAAGAAAACAGGCTTTTAAAATCGTCGAGGATCTTCGA
GCACGTCTTCACAAGGAGTGTGGCAGAGTCGTGTCTTGCTCTGACATTGTTGCCATCGCTGCTCGTGACTCCGTTGTCCTG
ACGGGCGGCCCTGAGTATGCCATCCCACTGGGAAGGAGA
GACGGTGTAAAGTTTGCAGAGATTAATGCAACATTTGAACACCTTGTAGGACCAACAGCCAAAGTTACTGAGATTCTCACCAAGCTTGACAGGAAAGGCCTGGATGCTACCGATGCAGTT
GCCCTTTCAGGTGGCCACACAATCGGCATTGGCCACTGCACTTCTTTCACTGAGCGTCTCTATCCGAGTCAAGATCCTACAATGGACAAGACTTTTGCTAACAATCTCAAGCTAACTTGT
CCCAAACTAGACACCACCAACACTACCTTCTTGGACATAAGGTCTCCTAACAAATTCGACAACAAGTACTATGTTGATCTAATGAACCGTCAAGGTCTGTTTACTTCGGATCAAGATTTG
TACACGGACAAGAGGACAAGGAGCATTGTTACTAGCTTTGCTATTAACGAATCTCTGTTCTTCGAGAAGTTTATAATTGGCATGATCAAGATGGGGCAATTAGATGTGTTGACAGGAAAC
CAAGGGGAGATTCGTGCTAACTGCTCGGCCATTAATCCCAAGAAGAAATATATTGAGTCTGTCGCGGAAGAGGAATTGGGTTCATCGTCTGAGATGAGA

Retrieve as FASTA