View Redoxidase 9406

Entry information : RcPrx85 (30190.m011151)

Entry ID	9406
Creation	2011-06-30 (Qiang Li)
Last sequence changes	2011-10-03 (Qiang Li)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2012-01-04 (Qiang LI)

Peroxidase information: RcPrx85 (30190.m011151)

Name (synonym)

RcPrx85 (30190.m011151)

Class

Class III peroxidase [Orthogroup: Prx008]

Taxonomy

Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus

Organism

Ricinus communis [TaxId: 3988 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	RcPrx85 start..stop	S start..stop
RcPrx77	518	0	7..320	10..323
MePrx29	496	4.35e-179	1..320	1..325
MePrx109	496	9.59e-179	1..320	1..321
VvPrx45	491	8.72e-177	6..320	17..331

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9406' 'join(2196011..2196220,2196318..2196509,2196590..2196755,2197016..2197407)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	2196011..2196220	208	N° 2	2196318..2196509	190	N° 3	2196590..2196755	164	N° 4	2197016..2197407	390
join(2196011..2196220,2196318..2196509,2196590..2196755,2197016..2197407)

Literature and cross-references RcPrx85 (30190.m011151)

DNA ref.	Phytozome 12: 30190 (2196011..2197407)

Protein sequence: RcPrx85 (30190.m011151)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	320 (297)
PWM (Da):	33919.75 (31393.5)
PI (pH):	8.09 (7.68)	Peptide Signal:	cut: 24 range:24-320

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASRLSLLCMVMLMIFSSLPCKAQLSSNFYDNTCPSALSTIKGAI
STAVSREQRMAASLIRLHFHDCFVQGCDGSILLDDTPTMTGEKTARNNANSVRGFDVIDNIKSQLESRCPGIVSCADIVAVAARDASVAASGPSWSVNLGRRDSTTASRSLADSNLPAFTDSLDRLTSLFGSKGLSQRDMVALSG
AHTIGQAQCVTFRGRIYNNASDIDAGFAATRRSQCPAASGSGDSNLAPLDLVTPNIFDNNYFRNLIQKKGLLQSDQVLFSGGATDSIVNQYSRDSSVFSSDFASAMVKMGNISPLTGSQG
QIRRVCNVV

Retrieve as FASTA

Remarks

Complete sequence from genomic.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTTCCCGTTTATCTCTTCTTTGCATGGTAATGTTAATGATTTTCTCAAGCTTGCCATGTAAGGCACAGCTTTCTTCAAACTTCTATGATAATACATGTCCTTCTGCCCTAAGTACT
ATAAAGGGAGCTATTAGTACAGCAGTCTCGCGCGAGCAAAGAATGGCTGCTTCGCTTATTCGCCTTCATTTCCATGATTGCTTTGTTCAGAGGTAAATGAATTTACTTGTTTTAGTTGTT
TCTTCCTGCCGAGTTCTTGAGAAAGTGAAAAACTACTAGGCTAAGTTATTATTGATTTTTGTATTGCAGGGTTGTGATGGCTCAATCTTGCTGGACGATACACCAACAATGACTGGCGAG
AAAACTGCACGCAATAATGCCAATTCTGTCAGAGGATTTGATGTCATTGACAATATCAAATCCCAACTAGAGAGCAGGTGTCCTGGAATTGTTTCATGTGCAGACATTGTTGCTGTAGCA
GCTCGCGATGCTTCCGTTGCTCTGTGAGTTCGCTATTATAATTTTTGTTAGCCCGAGCATGAGATGTATTTATTCATTAATATAATCTTTGCATATGAAACAGGCTAGTGGACCTTCATG
GTCAGTGAACCTTGGAAGAAGGGACTCCACCACAGCAAGCCGAAGTTTAGCTGATAGCAACCTTCCTGCCTTCACAGATAGCCTTGACAGGCTCACTTCTCTGTTCGGCAGCAAAGGTTT
GAGTCAAAGGGATATGGTTGCCCTTTCAGAGGTCTGTGGCTTTAGTAGTTGACTCGTAACTTTTTTTTTTTTTTTACCAAAACAATTCAAACTTCAGACCTTTTTCAAATGGCTAAAGCT
TGTGGTCTACAAGTGCAGTTGCTATTTATTTTTATTAAATGGTTTCCAATCGTGTTTTGTTGATGGCTGTGTTCAGATAAGGACTGATGAGGCAGAACTTGTTTCCACATGTGTGTTTCT
ATGTTTGTAATTACATCGAAGATGGCTGAAAGATTTGTTTGGAATTCGCAGGAGCACATACGATAGGGCAAGCACAATGTGTGACATTCCGTGGTAGGATTTACAACAACGCAAGTGATA
TTGATGCTGGCTTTGCTGCAACTAGAAGAAGCCAGTGTCCAGCTGCCAGTGGCAGTGGAGACAGCAATCTAGCACCACTAGATTTGGTGACCCCCAATATTTTTGATAACAACTACTTCA
GAAATCTTATCCAAAAGAAGGGCCTTCTCCAATCAGATCAAGTACTTTTCAGCGGTGGAGCTACCGACAGTATTGTCAACCAGTATAGCAGAGATTCTTCAGTTTTCAGCTCTGATTTTG
CGTCTGCCATGGTGAAAATGGGCAATATAAGTCCCTTAACAGGTTCTCAAGGACAAATACGAAGGGTCTGCAATGTGGTTAAC

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA