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Entry information : SiPrx108 (Si025196m)
Entry ID 9452
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: SiPrx108 (Si025196m)
Name (synonym) SiPrx108 (Si025196m)
Class Class III peroxidase    [Orthogroup: Prx018]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx108
start..stop		 S start..stop
SiPrx107 669 0 3..337 2..334
ZmPrx22 601 0 3..336 2..338
ZmPrx146 601 0 3..336 2..338
ZmPrx87 579 0 24..336 28..340
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9452' 'join(3366015..3367025)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3366015..3367025 1009  
join(3366015..3367025)


exon

Literature and cross-references SiPrx108 (Si025196m)
DNA ref. Phytozome 12:   scaffold_3 (3366015..3367025)
Protein sequence: SiPrx108 (Si025196m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336 (314)
PWM (Da):   %s   36695.44 (34221.2)  
PI (pH):   %s   7.53 (7.18) Peptide Signal:   %s   cut: 23 range:23-336
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTRSTWLPFA MAALVVASVA HASPPAKLKV GFYKHSCPEA EEIVRNAVRR GLARDPGVGA GLIRMHFHDC FVRGCDSSIL INSTPGNRAE KDSVANNPSM RGFDVIDDAK AVLEAHCPRT  VSCADVVAFA ARDGAYLAGG IEYQVPSGRR DGRVSIEAEV LNNNVPAPTD RLRELIESFK RKGLSADDMV TLSGAHTIGR SHCSSFTQRL YNFSGQLGKT DPSIDPAYAE HLKKRCPWPS 
SDDQMDPTVV PLDPVTPASF DNQYFKNVLS HKVVLTSDQT LLDSPWTAGI VKFNSAVEKA WQLKFAASMI KMGKIEVLTG DEGEIREKCF VVNPHY* 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACGAGGT CCACTTGGTT GCCGTTTGCC ATGGCGGCGC TCGTGGTCGC CTCGGTGGCG CACGCCTCGC CGCCGGCGAA ACTGAAGGTC GGGTTCTACA AGCACTCGTG CCCGGAGGCG  GAGGAGATCG TGCGCAACGC CGTCCGCCGC GGCCTCGCCC GTGACCCCGG CGTCGGTGCC GGCCTCATCC GCATGCACTT CCACGACTGC TTCGTCCGCG GCTGCGACTC CTCCATCCTC  ATCAACTCGA CGCCGGGCAA CCGGGCTGAG AAGGACTCCG TCGCCAACAA CCCCAGCATG CGGGGCTTCG ACGTCATCGA CGACGCCAAG GCCGTCCTCG AGGCGCACTG CCCGCGCACC  GTCTCCTGCG CCGACGTCGT CGCCTTCGCT GCGCGCGACG GCGCCTACCT CGCCGGCGGC ATCGAGTACC AGGTCCCCTC GGGCCGCCGC GACGGCCGCG TCTCCATCGA AGCCGAGGTG  CTCAACAACA ACGTCCCCGC CCCCACCGAC CGCCTCCGCG AGCTCATCGA GAGCTTCAAG CGCAAGGGCC TCTCCGCCGA CGACATGGTC ACGCTCTCCG GCGCGCACAC CATCGGGCGC  TCCCACTGCT CCTCCTTCAC GCAGCGCCTC TACAACTTCA GCGGCCAATT GGGCAAGACC GACCCCTCCA TCGACCCCGC CTACGCCGAG CACCTCAAGA AGCGGTGCCC GTGGCCGTCC  AGCGACGACC AGATGGACCC CACCGTGGTG CCGCTCGACC CCGTCACGCC GGCGAGCTTC GACAACCAGT ACTTCAAGAA CGTGCTCTCG CACAAGGTCG TGCTCACCTC CGACCAGACG  CTGCTCGACA GCCCGTGGAC GGCCGGGATC GTCAAGTTCA ACTCCGCCGT CGAGAAGGCG TGGCAGCTCA AGTTCGCCGC CTCCATGATC AAGATGGGCA AGATCGAGGT GCTCACCGGC 
GACGAGGGGG AGATCAGGGA GAAGTGCTTC GTCGTCAACC CACACTACTA G 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACGAGGT CCACTTGGTT GCCGTTTGCC ATGGCGGCGC TCGTGGTCGC CTCGGTGGCG CACGCCTCGC CGCCGGCGAA ACTGAAGGTC GGGTTCTACA AGCACTCGTG CCCGGAGGCG  GAGGAGATCG TGCGCAACGC CGTCCGCCGC GGCCTCGCCC GTGACCCCGG CGTCGGTGCC GGCCTCATCC GCATGCACTT CCACGACTGC TTCGTCCGCG GCTGCGACTC CTCCATCCTC  ATCAACTCGA CGCCGGGCAA CCGGGCTGAG AAGGACTCCG TCGCCAACAA CCCCAGCATG CGGGGCTTCG ACGTCATCGA CGACGCCAAG GCCGTCCTCG AGGCGCACTG CCCGCGCACC  GTCTCCTGCG CCGACGTCGT CGCCTTCGCT GCGCGCGACG GCGCCTACCT CGCCGGCGGC ATCGAGTACC AGGTCCCCTC GGGCCGCCGC GACGGCCGCG TCTCCATCGA AGCCGAGGTG  CTCAACAACA ACGTCCCCGC CCCCACCGAC CGCCTCCGCG AGCTCATCGA GAGCTTCAAG CGCAAGGGCC TCTCCGCCGA CGACATGGTC ACGCTCTCCG GCGCGCACAC CATCGGGCGC  TCCCACTGCT CCTCCTTCAC GCAGCGCCTC TACAACTTCA GCGGCCAATT GGGCAAGACC GACCCCTCCA TCGACCCCGC CTACGCCGAG CACCTCAAGA AGCGGTGCCC GTGGCCGTCC  AGCGACGACC AGATGGACCC CACCGTGGTG CCGCTCGACC CCGTCACGCC GGCGAGCTTC GACAACCAGT ACTTCAAGAA CGTGCTCTCG CACAAGGTCG TGCTCACCTC CGACCAGACG  CTGCTCGACA GCCCGTGGAC GGCCGGGATC GTCAAGTTCA ACTCCGCCGT CGAGAAGGCG TGGCAGCTCA AGTTCGCCGC CTCCATGATC AAGATGGGCA AGATCGAGGT GCTCACCGGC 
GACGAGGGGG AGATCAGGGA GAAGTGCTTC GTCGTCAACC CACACTACTA G 

Retrieve as FASTA