View Redoxidase 9466

Entry information : SiPrx121 (Si030393m)

Entry ID	9466
Creation	2011-07-03 (Qiang Li)
Last sequence changes	2014-02-04 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2014-04-10 (Christophe Dunand)

Peroxidase information: SiPrx121 (Si030393m)

Name (synonym)

SiPrx121 (Si030393m)

Class

Class III peroxidase [Orthogroup: Prx020]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria

Organism

Setaria italica [TaxId: 4555 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SiPrx121 start..stop	S start..stop
ZmPrx10	598	0	5..328	7..330
SbPrx31	585	0	11..328	14..332
TmPrx07	560	0	22..343	22..343
TaPrx15-1A	560	0	22..343	22..343

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9466' 'join(34102601..34102819,34102961..34103152,34105011..34105631)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	34102601..34102819	217	N° 2	34102961..34103152	190	N° 3	34105011..34105631	619
join(34102601..34102819,34102961..34103152,34105011..34105631)

Literature and cross-references SiPrx121 (Si030393m)

DNA ref.	Phytozome 12: scaffold_2 (34102601..34105631)

Protein sequence: SiPrx121 (Si030393m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	343 (320)
PWM (Da):	37339.57 (34884.2)	Transmb domain:	o264-286i
PI (pH):	5.88 (5.87)	Peptide Signal:	cut: 24 range:24-343

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAARCGSLPLVAVLVALLCRAEAAVRELKVGYYAETCPEAEGIVREVMARARAREARSVASVMRLQFHDCFVNGCDGSVLMDATPTMPGEKDALSNINSLRSFEVVDEIKEALEERCPGV
VSCADIVIMAARDAVVLTGGPSWEVRLGRDDSLTASQEDSDSIMPSPRANASALIRLFAGLNLSVTDLVALSGSHSIGEARCFSIVFRLYNQSGSGRPDPHMDAAYRCALDALCPKGGDE
EVTGGMDATPRAFDNQYFKDLVALRGFLNSDQTLFSDNARTRRVVKRFSKDQNAFFRAFAEGMIKMGELQNPRKGEIRRNCRVANNSPATTPKEVAAYRVMDF*

Retrieve as FASTA

Remarks

Complete sequence from genomic (introns 1 and 2)..

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGACCCTTC TATTTAGCAC TTCGTATCCA AACACCTATT GTATCGCTGC ACCAAAATAC AGAGAATAAG AGCTTTTATA TACGATGATA GGGAACATGA TAAGCTGCAT GGCGGCATGG GCCAACAGTT TCTCATGTTT TTGCAAGTGG TAGGATATCA TTGCATATCA TGGGAATCAG GTTGACTAGG ATAAGATAAA GAATGAAAGC GACCGCATAC TAAATAATTA AATTTTCTCA AGTTACTAGT AGTGCGGATG GAATATCTGC TGCTGCAAGC ATGCATGCAT ATGGTTCCCT TGTGGCCGGT CATGGATTGA GGGCCCAGGA AAGTGCGGGT CTTATTCTCG AGTCTAAAGA GAACTGCAGT CCTGTCCTCG TTGGGCTGGG GGGTCCTACT TGGATTTTCT TGGTGGACGG CTGTTCGTTG CTATGTGTCT TGAGCTTGAG CTTCCTTTAC TTTTGTTTAC TTTGATAGTG CAGTCTTCCA AGGTGTTGGT GAATTTTACG TATAAACAGA GGGGCCAAGT CTTACTCTAA AGTGGATCAT GGGCCAAGGA TTTTTTTTTA CAAATAGTGA GTTTAATACT TAAGGTCAAG CAACACGAGA GAAGATTAAA ATCCCAAGTA ATCAAGAATA GGTGGGCAAG TGGCAGAGGT TGCAACACAT TAGATTCATA TTTAGGAGCA CGGATTACAT GTCACATGAA ACACTGCACT AAAGTTAATT ACATTTACAA TGATTAGAGA TAGTACTAGC TCTATAAGAC TAATAATAGT GGATAGAGCA ATGAGGACTA GGCACAAAGA TTAGCATTGG TAAATCTAAT GATGATTTAT GATGAGTGTA AATTTGCCTT TAATTATTTT ATGGTGTTAC GGCTCAACAC ATTAAATTCT CACAACGTTG AAAATTTAGC GAGCACATAC TTCCTCCCCC GTCAATATAG GATACTCTAT TTTGGAAAAG TAAAACTTTG TAAATTTTGA CCAACAATGA GTCAAATTGT ATGCATGGGA GGGCTCCTCC CAAATCGTTT TAGGAGAAGC CAAAATCAGA AGGGAGAAAA ATGTGGCTTC ACCCGCTCCT GATTTACCTT CTCATCGTTT CCCAAACCGA CTTCTTATTT ATAAAGCCAA AGCTAAAAAG AGTCGTGCAG AATGGATCCT CACTGTAAGT AACTTTCATA TTCAATAGTA CTTCCAACGT GAGATCCCAC GTATCGACAT GCAATTAATC GTGTTTTACG AACCACAAGT GTTAGCGTGA AATACAACAC GAAAATGATG AATTGCGAGG ACATCTTTTT TTTTCACAAC TCCATTCACC CCGTTCACAG CTTTGACTAG AATTAGAAGT CCCCATTGTT TTCACCTTTG CCCAAAATGT CATGAAAAAC CAGGGACACA GTGACACGGA GGCGCGCACA AAAGATGTCC GGGTCAATGC TTCCCTCCTT CCCTGCCTGC CAATAGCCGG CCGTGCCGCC ATCACCCTCC ACCGCGACAC GGAGCACGAT CCGGGGCCGA TATTTTTGAC GCGCGCACGC GCAACCCAAC GCGATCCCCG TGCGATCGAT GCCGTCGCGC CCGCGCGTGC TAGGGACGTG TGGGTGGGTG CAGGCCGCCA GGACGGCGCC GCGCGCACCC GGAGCCGACC CGGCCGGCCG CGCGTGCTCG CGCCGTCCGC CCACCCACTG GCTGGCCACA GCTCCCCGCC GCGTCGCGCG AGGCCCGCGC CCCCGCCTCC CCAATCCCGT GGTGACAACC CATCGCCGCC ATGGGCCTCG GCCTGCAGCC AGCGGCCAGC CCTCGTTTTC TATCTATCTG CAACAACCCG CCGGGGCGTC GCGGCTTGGA CGCTACTACT AGTACGCTGC CAAACAGCGG AGCAGAGCAA AGTGCAGCGC GGCGCAGTGC
AGAGCGACCC CTCTCGGAGC AGAGCGTGCG CGCTTGCTCC ACCCCCTCCT CTCTCTCGTC TCTCCCCCGG TCTATCGAGC C

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGGCCCGCTGCGGGAGCCTCCCCCTGGTCGCCGTGCTGGTCGCGTTGCTCTGCCGCGCCGAGGCGGCGGTGAGGGAGCTCAAGGTCGGGTACTACGCCGAGACGTGCCCGGAGGCC
GAGGGCATCGTCCGGGAGGTCATGGCGCGCGCGCGCGCCCGCGAGGCCCGCAGCGTCGCCTCCGTCATGCGCCTCCAGTTCCACGACTGCTTCGTCAACACGTGAGTCGATCGCTCTACC
CACGCATCTGATCTCGCCTTCGATTGCACCGCACGACGTGGTTTTTTTCTCCGCGACCGATCTGACGAGATGATGATGGATTCTCTAACCTCTGTTCCTCTTCGTTCCTCGCGAGGTTGC
AGGGGTGCGACGGGTCGGTGCTGATGGACGCCACGCCGACGATGCCCGGCGAGAAGGACGCGCTGTCCAACATCAACTCCCTGCGCTCGTTCGAGGTCGTCGACGAGATCAAGGAGGCGC
TGGAGGAGCGCTGCCCCGGCGTCGTCTCCTGCGCCGACATCGTCATCATGGCCGCCCGCGACGCCGTCGTCCTGTGGTACGTGCCTGCGCCTTCCCTCCCCTTCCCCTCCCCTCCCCTGC
CCCCACGACCCGCAGATCCATCGCGCCGCTCGCCTCGCTACGCGGTGGTGCCGACGCGCATGCCGTTTCTCTTCCGCGGCCAGCCGTTTCCCGTGAGAAATCCAGCGTCTCTACTCCGCT
TTGTCTGCCGTTTCCGGTCCGAATCCAGGGCTTCTACTCCGCTTTGTCTGCCGTTTCCAGTCCAGAATTCCTACTCCCTCCGCTGCCTGGCGTTTCCAGTGCAGAATTCCGCGTTGATCC
TGCTCCCCCAACATTAGTTTCAGTTTCAGGATCCACCGTGAGGACAAGACAAGAATATTGACTAGGAAAGCTTTTTCACGAATCTCTTTTACCACCACGGCAACGCTGCGCGCACGGGTA
CTTCGTTTCAGCGTGGCCACCAACGCTCACCGTTGCGTCACCTGTGGACGCATTAGCCTTTCTGCCACTAGCCTGGCATTATTCTTCACTCCCCAAATCCAAAGTCACCGCGTCCTGACT
AAAATCCACGTAGAAAACGAGCATCTGAGGATTTTCTGAGATATTTGGCGTGTGCCACCCCGTCACTTGCGTGTGTACACCACGGCTATGCATTCACGTTTATCTTCTTGGTGGAAACAC
ACGCTTCGGCGTCTCTCTAATCTCAAGCTTCTTTCGCATTTTACTTTTTATAGGAGATCGTTTGATGCTTTCCGAATTTACAGTAAAAATATTTCCTAGTACAAATTTTAGGGTGCAAAT
TGGCAGCCTGATGACCATGTCACTTTGCCATTGATGAAAGCGATGCTAGCAATACATGGAGCCATAGAGATGCATGCACTCCAGGTCGCTGCTCCCTGTAACCACCGCAGCTGGGCGGGC
AGGATGGCATCGCCATCACGCGCCCCCCATAGGCAGACAGCCAGGCCCAGTCAGGCGCATTTAACGGGGGCACGGGCGCGCAACCGAGCCGGGAAAGGCCAGGCCAGAGGGCCGCGCCCA
CGAGGCCACGAAAGGCTACCCGCGAGCGACCCCGCCAGGGTGGGGCGGGTGGCGCGGCTAGATTGGTGTGGTGCACTGGTGGTAGGCTTCGGCGTCTAGCGCAGACAGCCCCGTACCGGG
CCCGTTGCTGCCACTGCCACTGGCGCCCCGCGAATGGCAAGGCCGCTGGCCCCGCCGCGCCGACGGGGTATTCTGTTTCTCTCGATCGAGTGATGATGGGAACGAGACTCCCGCCGGGCA
GGGCACTTTTCCCGTGCTCCGTGCTCCCTTAGGAAGGTTCTCGGTACGCGTGTGCAGACAAGCGACGATGCCCGGGACGGAGTACGATGTCACTTTGTCACTATGCCAGTTGCCAGGGAT
ACGAATTCTCTTCTTGTTCCCTTGGCGAGTTAACAGTCGACTGGTGGCTGCACTGAATTGGTTGATCGCTGATGCAGGAGATGTCACTCATAGCCATACCACCTACGCCTACGTTAATAT
TTTCGCTAACGTCATCCTACAACATTCCCGTTACTTGTTCAGCTAGTGGGGTACTATTACAGGGTACAGGCTCTGTTGGTGTTTTCCTGTGACCAAATGAATGCAACAGGAAGATTGGTT
CATCAAAATGGCCGTAGTGCTACTAGTTGGATTGCAGTGTGCCACGCTGCAGACCTGCAGCGTCCGTTCACTCTGATTTTTGTTTAGTTTTTGTGAGGGAAAACGGCGCAGATCATATTA
ATAGTATCAATCACTGTCAGTGAGAGTTTGCATTGCAATCTTTTTGCAGTACTAATACATGTCTGACCGATGAGTCAAAAAAAAGTGTTTCACTTGGATTGACCTCTTGATTTTGATTTG
TTCTCTTGCCACAGACCGGTGGGCCCAGCTGGGAGGTGCGGCTCGGGCGCGACGACAGCCTGACGGCGAGCCAGGAGGACTCGGACAGCATCATGCCGAGCCCGCGCGCCAACGCCAGCG
CGCTCATCCGCCTCTTCGCGGGGCTCAACCTCAGCGTCACCGACCTCGTCGCGCTCTCCGGCTCGCACTCCATCGGCGAGGCTCGCTGCTTCTCCATCGTCTTCCGCCTCTACAACCAGT
CCGGCTCCGGCCGCCCCGACCCCCACATGGACGCCGCCTACCGCTGCGCGCTCGACGCGCTCTGCCCCAAGGGCGGCGACGAGGAGGTCACGGGCGGCATGGACGCCACCCCGCGCGCCT
TCGACAACCAGTACTTCAAGGACCTCGTCGCCCTCCGCGGCTTCCTCAACTCCGACCAGACGCTCTTCTCCGACAACGCCAGGACCCGCCGCGTCGTCAAGCGCTTCAGCAAGGACCAGA
ACGCCTTCTTCAGGGCCTTCGCCGAGGGGATGATCAAGATGGGCGAGCTGCAGAACCCCAGGAAGGGGGAGATACGGCGTAACTGCCGCGTCGCCAACAACTCGCCGGCGACGACACCCA
AGGAGGTGGCGGCGTACCGCGTCATGGACTTCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA