Entry information : SiPrx13 (Si002089m)
Entry ID 9475
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-12-12 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-12-12 (Qiang Li)
Peroxidase information: SiPrx13 (Si002089m)
Name (synonym) SiPrx13 (Si002089m)
Class Class III peroxidase    [Orthogroup: Prx175]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx13
start..stop
S start..stop
SbPrx67 525 0 17..343 23..348
ZmPrx124 504 0 27..343 26..342
BdiPrx94 484 8.9e-174 1..343 1..335
OsPrx19 476 1.67e-170 3..343 4..336
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9475' 'complement(join(38900970..38901388,38901521..38901686,38901807..38901992,38902211..38902378,38902418..38902468))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 38902418..38902468 49 N° 2 38902211..38902378 166 N° 3 38901807..38901992 184 N° 4 38901521..38901686 164
N° 5 38900970..38901388 417  
complement(join(38900970..38901388,38901521..38901686,38901807..38901992,3890221 1..38902378,38902418..38902468))


exon

Literature and cross-references SiPrx13 (Si002089m)
DNA ref. Phytozome 12:   scaffold_5 (38902468..38900970)
Protein sequence: SiPrx13 (Si002089m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   343 (320)
PWM (Da):   %s   36991.37 (34675.0)  
PI (pH):   %s   4.6 (4.55) Peptide Signal:   %s   cut: 24 range:24-343
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MALGLPLLLVVVVVAASSRAGLADPAPAAVSALPGLPVAGLAVGFYNASCPEVEDLVLAEMRAIVAKDRTLGPALLRFMFHDCLVRGCDASIMLESRSKKGEQDAVPSYGLRGYEEVERI
KAKVEEACPLTVSCADIIALAARDAVYLSNGPRYAVETGRRDGKVSAKSDADNDLPPPFSNIVDLKTYFSVKGLGWKDLVVLSGSHTIGSAQCSSFASDRLYNYSGRGVQDPSLNKTFAA
GLREACEAGRENDTTPVYMDSTTPYDFDLGYYRDVLSNTSLFLSDKALMDDRWTRTYVERMAAAASPDEFFDDYAVAMTNMGRLEVLTGDNGEIRKTCTSYVD*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATTGGGGCTGCCGCTGCTGCTGGTGGTGGTGGTCGTCGCCGCGAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGAGCGCGCTGCCGGGGCTCCCGGTCGCCG
GGCTCGCCGTCGGGTTCTACAACGCGTCGTGCCCGGAGGTGGAGGATCTGGTCCTCGCCGAGATGCGCGCCATCGTCGCCAAGGACAGGACCCTCGGCCCCGCGCTGCTGCGGTTCATGT
TCCACGACTGCCTCGTCAGG
GTGCGTTCGTTGCGCTTCTTCAATTTCTCTAGCTTCAGTTCATCCGCTCGTTACGTTTCAAAAAAAAAAAAAAGGTTCATCCGCTCGTGCTCCGTGCTCC
TCGTGTCCGTGTTCTGCGTGTGCGTGTCCCGTCGCGTGCACGAAATGAGAAACACGAGTGATTGGTGCGTCGCCGTGGCGGTTGGTGACGCGGCTTTCCTGGATGATTTTGCCTTCAGGG

GGTTGCGACGCGTCGATCATGCTCGAGTCGCGGAGCAAGAAGGGGGAGCAGGACGCCGTCCCGAGCTACGGCCTCCGCGGCTACGAGGAGGTCGAACGGATCAAGGCCAAGGTGGAGGAG
GCGTGCCCGCTCACCGTGTCGTGCGCGGACATCATCGCCTTGGCGGCCCGGGACGCCGTGTACCTG
GTAAGCGCCATCCATTGGTCAAATGCATTCGTGAGCGAGCTCGAATGCTCGATC
ATCGTGGTGTTCATCGCTTTCCTCTGATCCACGTTGACAAGCGGCGGCTGTTCCCCATTTCTGCAGAGAGCAACGGGCCGCGCTACGCCGTGGAGACCGGGCGCCGGGACGGCAAGGTGT
CGGCCAAGTCCGACGCCGACAACGACCTCCCGCCGCCCTTCTCCAACATCGTCGACCTCAAGACATACTTCAGCGTCAAGGGCTTGGGCTGGAAGGACCTCGTCGTCCTATCAG
GTAGCA
TAAATTATACTACCCACAAAAAATCAATGAACTAGCTAGCTTCCATTGGAATTTGGAAGTGCAAGCAAAGCTTCCAACCAACAACCGATTGCCCAATAATCCTTCCCGATCGTCATCAAC
CCGCAGGGGGAGCCACACGATCGGGAGTGCGCAGTGCTCGTCGTTCGCGTCGGACCGCCTCTACAACTACAGCGGGAGAGGGGTGCAGGACCCGTCGCTGAACAAGACGTTCGCGGCGGG
GCTGCGGGAGGCGTGCGAGGCCGGGCGCGAGAACGACACCACCCCGGTGTACATGGACTCCACCACCCCCTACGACTTCGACCTGGGCTACTACCGCGACGTGCTCAGCAACACGAGCCT
GTTCCTCTCCGACAAGGCGCTCATGGACGACCGGTGGACCAGGACGTACGTGGAGCGGATGGCCGCCGCGGCGTCGCCCGACGAGTTCTTCGACGACTACGCGGTCGCCATGACCAACAT
GGGCAGGCTCGAGGTGCTCACGGGCGATAACGGAGAGATCAGGAAGACCTGCACCTCGTACGTTGAC

Retrieve as FASTA