View Redoxidase 9513

Entry information : SiPrx170 (Si039321m)

Entry ID	9513
Creation	2011-07-03 (Qiang Li)
Last sequence changes	2011-10-03 (Qiang Li)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2011-12-15 (Qiang Li)

Peroxidase information: SiPrx170 (Si039321m)

Name (synonym)

SiPrx170 (Si039321m)

Class

Class III peroxidase [Orthogroup: Prx056]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria

Organism

Setaria italica [TaxId: 4555 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SiPrx170 start..stop	S start..stop
SiPrx172	561	0	1..322	1..322
OsPrx44	545	0	2..322	3..323
BdiPrx41	545	0	2..323	3..324
TaPrx219-2A	544	0	1..323	1..325

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	45578002..45578991	988
join(45578002..45578991)

Literature and cross-references SiPrx170 (Si039321m)

DNA ref.	Phytozome 12: scaffold_9 (45578002..45578991)

Protein sequence: SiPrx170 (Si039321m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	330 (307)
PWM (Da):	35844.35 (33393.1)	Transmb domain:	i7-29o
PI (pH):	9.14 (9.25)	Peptide Signal:	cut: 24 range:24-330

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MAAAFRLVVV VTCALLLASA CQGLHVGYYK KTCPRVEHIV RAEVKKFVYK NAGIGAGLIR MLFHDCFVQG CDGSVLLDPT PANPEPEKRS PPNFPSLRGF EVIDAAKDAV ERACPGKVSC ADIVAFAARD AAYFLSKLKV KIDMPAGRLD GRVSRASEAL DNLPPPFFNV SELVAAFAAK GLGAEDMVVL SGAHTVGRSH CSSFVADRLA APSDINAGFA NFLRRRCPAN PTPANDPTVN
QDFVTPNALD SQYYKNVLGH KVLFASDAAL LGSPETAKMV RDNAYIPGWW EDRFKAAFVK MSRVEVKTGK QGEIRKNCRV VNHGHPHRHY *

Retrieve as FASTA

Remarks

Complete sequence from genomic.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGCTGCGG CATTCAGGCT CGTCGTGGTG GTGACATGCG CCTTGTTGCT GGCGTCGGCC TGCCAGGGCC TCCATGTGGG CTACTACAAG AAGACGTGCC CCCGCGTGGA GCACATCGTG AGGGCCGAGG TGAAGAAGTT CGTCTACAAG AACGCCGGCA TCGGCGCCGG CCTCATCCGC ATGCTCTTCC ACGACTGCTT CGTCCAGGGA TGCGACGGCT CCGTCCTCCT GGACCCGACG CCGGCGAACC CGGAGCCGGA GAAGCGGAGC CCGCCCAACT TCCCCAGCCT GCGCGGCTTC GAGGTGATCG ACGCGGCCAA GGACGCCGTC GAGAGGGCCT GCCCGGGCAA GGTCTCCTGC GCCGACATCG TCGCCTTCGC CGCCCGCGAC GCCGCCTACT TCCTCAGCAA GCTCAAGGTA AAGATCGACA TGCCCGCCGG CCGCCTCGAC GGGCGCGTCT CCAGGGCCTC GGAGGCCCTC GACAACCTGC CGCCCCCATT CTTCAACGTC AGCGAGCTCG TCGCCGCCTT CGCCGCCAAG GGTCTCGGCG CCGAGGACAT GGTCGTGCTC TCCGGCGCGC ACACCGTCGG CCGCTCCCAC TGCTCGTCCT TCGTCGCCGA CCGCCTCGCC GCCCCCTCCG ACATCAACGC CGGGTTTGCC AACTTCCTCA GGAGGCGGTG CCCCGCCAAC CCGACCCCGG CGAACGACCC CACCGTGAAC CAGGACTTCG TCACCCCCAA CGCGCTCGAC AGCCAGTACT ACAAGAACGT GCTCGGGCAC AAGGTGCTCT TCGCGTCCGA CGCCGCGCTG CTCGGCTCGC CGGAGACGGC CAAGATGGTG CGCGACAACG CCTACATCCC CGGCTGGTGG GAGGACAGGT TCAAGGCCGC CTTCGTCAAG ATGTCCCGGG TGGAGGTGAA GACCGGCAAG CAGGGCGAGA TCAGGAAGAA TTGCAGGGTT
GTCAACCATG GTCATCCGCA CAGACACTAC

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA