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Entry information : SiPrx38 (Si007872m)
Entry ID 9536
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-12-14 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-12-07 (Qiang Li)
Peroxidase information: SiPrx38 (Si007872m)
Name (synonym) SiPrx38 (Si007872m)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx38
start..stop		 S start..stop
ZmPrx57 462 1.22e-164 1..338 1..348
ZmPrx71 460 1.1e-163 23..342 34..351
SbPrx80 456 4.36e-162 28..341 39..351
BdiPrx113 455 7.29e-162 23..339 26..340
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9536' 'complement(join(9528299..9529324))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 9528299..9529324 1024  
complement(join(9528299..9529324))


exon

Literature and cross-references SiPrx38 (Si007872m)
DNA ref. Phytozome 12:   scaffold_4 (9529324..9528299)
Protein sequence: SiPrx38 (Si007872m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   342 (316)
PWM (Da):   %s   36082.33 (33219.8)  
PI (pH):   %s   8.57 (8.91) Peptide Signal:   %s   cut: 27 range:27-342
Sequence
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MDTHRLHTSA LFLLLLVIDA AMVTEAKLVP NYYRKTCPRA ERIVTDVVSQ KQLSHPTTAA GVLRVFFHDC FVSGCDASVL VSPTAFARSE RDAAQSQSLP GDAFEAVARA KTALELACPG  VVSCADVLAI AARDLVTMTG GPFYPLRLGR KDALASSSAA PDAELPLANS TVPRLVAMFA AKGFTVQELV ALSGAHTLGF AHCAEFADRI FRRGNKGxxx xxxxxDPAMN PAYAKGLHDA 
CRNYQRDPTI AVFNDVMTPG KFDNMYFVNL QRGLGLLSTD QELWTDPRTR PFVQRYAANQ TAFFADFARA IVKLGVMGVK TGRDGEVRRR CDMFNGNPVP GG 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
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ATGGACACTC ACCGTTTGCA CACATCGGCG CTCTTCCTCC TCCTCCTCGT CATCGACGCG GCGATGGTGA CGGAGGCCAA GCTGGTGCCG AACTACTACA GAAAGACGTG CCCGCGCGCG  GAGCGGATCG TGACGGACGT GGTCTCCCAG AAGCAGCTCT CGCACCCGAC CACCGCGGCG GGTGTGCTCC GCGTCTTCTT CCACGACTGC TTCGTCAGCG GCTGCGACGC GTCCGTGCTG  GTGTCCCCGA CCGCGTTCGC CCGGTCCGAG CGCGACGCCG CGCAGAGCCA GTCGCTCCCG GGGGACGCCT TCGAGGCCGT GGCGCGCGCC AAGACGGCGC TCGAGCTCGC GTGCCCCGGC  GTCGTGTCCT GCGCCGACGT GCTCGCCATC GCGGCCCGGG ACCTCGTCAC CATGACCGGG GGCCCCTTCT ACCCGCTCCG CCTGGGACGC AAGGACGCGC TCGCCTCGTC CTCCGCCGCG  CCCGACGCCG AGCTCCCGCT CGCCAACTCC ACCGTGCCAC GCCTCGTCGC CATGTTCGCC GCCAAGGGGT TCACGGTGCA GGAGCTCGTC GCGCTCTCCG GCGCGCACAC GCTGGGGTTC  GCGCACTGCG CCGAGTTCGC CGACCGCATC TTCCGCCGGG GCAACAAGGG Tnnnnnnnnn nnnnnnnnnn nnnACGACCC GGCCATGAAC CCGGCGTACG CCAAGGGGCT GCATGACGCG  TGCAGGAACT ACCAGCGGGA CCCGACCATC GCGGTGTTCA ACGACGTCAT GACGCCGGGC AAGTTCGACA ACATGTACTT CGTCAACCTC CAACGCGGCC TGGGCCTGCT CAGCACGGAC  CAGGAGCTCT GGACCGATCC CCGGACGCGG CCATTCGTGC AGCGCTACGC CGCCAACCAG ACGGCCTTCT TCGCCGACTT CGCGCGCGCC ATCGTGAAGC TCGGCGTCAT GGGCGTCAAG 
ACGGGGCGGG ACGGGGAGGT GCGCCGGCGG TGCGACATGT TCAACGGAAA CCCCGTCCCG GGGGGC 

Retrieve as FASTA  
CDS►
Send to BLAST
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ATGGACACTC ACCGTTTGCA CACATCGGCG CTCTTCCTCC TCCTCCTCGT CATCGACGCG GCGATGGTGA CGGAGGCCAA GCTGGTGCCG AACTACTACA GAAAGACGTG CCCGCGCGCG  GAGCGGATCG TGACGGACGT GGTCTCCCAG AAGCAGCTCT CGCACCCGAC CACCGCGGCG GGTGTGCTCC GCGTCTTCTT CCACGACTGC TTCGTCAGCG GCTGCGACGC GTCCGTGCTG  GTGTCCCCGA CCGCGTTCGC CCGGTCCGAG CGCGACGCCG CGCAGAGCCA GTCGCTCCCG GGGGACGCCT TCGAGGCCGT GGCGCGCGCC AAGACGGCGC TCGAGCTCGC GTGCCCCGGC  GTCGTGTCCT GCGCCGACGT GCTCGCCATC GCGGCCCGGG ACCTCGTCAC CATGACCGGG GGCCCCTTCT ACCCGCTCCG CCTGGGACGC AAGGACGCGC TCGCCTCGTC CTCCGCCGCG  CCCGACGCCG AGCTCCCGCT CGCCAACTCC ACCGTGCCAC GCCTCGTCGC CATGTTCGCC GCCAAGGGGT TCACGGTGCA GGAGCTCGTC GCGCTCTCCG GCGCGCACAC GCTGGGGTTC  GCGCACTGCG CCGAGTTCGC CGACCGCATC TTCCGCCGGG GCAACAAGGG Tnnnnnnnnn nnnnnnnnnn nnnACGACCC GGCCATGAAC CCGGCGTACG CCAAGGGGCT GCATGACGCG  TGCAGGAACT ACCAGCGGGA CCCGACCATC GCGGTGTTCA ACGACGTCAT GACGCCGGGC AAGTTCGACA ACATGTACTT CGTCAACCTC CAACGCGGCC TGGGCCTGCT CAGCACGGAC  CAGGAGCTCT GGACCGATCC CCGGACGCGG CCATTCGTGC AGCGCTACGC CGCCAACCAG ACGGCCTTCT TCGCCGACTT CGCGCGCGCC ATCGTGAAGC TCGGCGTCAT GGGCGTCAAG 
ACGGGGCGGG ACGGGGAGGT GCGCCGGCGG TGCGACATGT TCAACGGAAA CCCCGTCCCG GGGGGC 

Retrieve as FASTA