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Entry information : SiPrx42 (Si008411m)
Entry ID 9540
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-12-14 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-12-07 (Qiang Li)
Peroxidase information: SiPrx42 (Si008411m)
Name (synonym) SiPrx42 (Si008411m)
Class Class III peroxidase    [Orthogroup: Prx104]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx42
start..stop		 S start..stop
SbPrx132 580 0 4..372 7..406
ZmPrx23 556 0 18..372 36..421
BdiPrx29 493 3.36e-176 2..372 6..370
OsPrx79 492 2.13e-175 18..367 47..389
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 19301454..19301504 49 N° 2 19301289..19301426 136 N° 3 19300267..19301193 925  
complement(join(19300267..19301193,19301289..19301426,19301454..19301504))


exon

Literature and cross-references SiPrx42 (Si008411m)
DNA ref. Phytozome 12:   scaffold_4 (19301504..19300267)
Protein sequence: SiPrx42 (Si008411m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   372 (353)
PWM (Da):   %s   40961.28 (38900.1) Transmb domain:   %s   i9-28o
PI (pH):   %s   5.26 (5.11) Peptide Signal:   %s   cut: 20 range:20-372
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLSLFLFALLASAAQRSLQVGFYGQSCPEAEATISDIVNNEIAMD
RGISPGLIRLFFHDCFITGCDASILLDESPAGDVPEKESSANGFTLVGLRTIDIAKSTLESMCPRTVSCADILAFAARDAAVAAGLPSYDVAAGRRDGMRSNMDDLPGNFPVPGHHVPRLT
ELFSQRGLSQEDMVVLSGAHSIGGAHCFMFSNRIYGFSEEADVDPSLDPEFAARLRQVCPPRNPDDDPQQAPKVKFDSQTGEKLDSAYYSELLARRGLLTSDNALIEDPQTRAMVEAFAG
DDAMWQQKFAEAMQRVGMLDVLIGEGKGQVRKQCRLVNGQEQQQQPQLPWFRHQQRLPWSRQRRPRRPFPHHPVADLINGFFRGFH

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTGTCGCTGTTCCTTTTCGCCCTGCTCGCGTCGGCGGCCCAGCGGAGCGCCGTCGACGCGTTGATCGTCGACGGCCTCTGCAGGTGGGGTTCTATGGCCAGTCGTGCCCAGAGGCCG
AGGCAACCATCAGCGACATCGTCAACAACGAGATCGCCATGGACCGCGGCATCTCCCCCGGCCTCATCCGGCTATTCTTCCACGATTGCTTCATCACGGTAACAGGCATTTCCTGATCAT
GTGTTGGCTGACGTGCACACAACACCCTGTCGTGACCGTTCGTGTACCGCCGGCGGCCGGTCTGCGCGTGCAGGGGGCTGCGACGCTTCCATCCTCCTGGACGAGTCGCCGGCAGGCGAC
GTCCCGGAGAAGGAGTCGTCGGCCAACGGGTTCACCCTCGTCGGCCTCCGGACCATCGACATCGCCAAGTCGACCCTCGAGTCCATGTGCCCGCGCACGGTCTCCTGCGCGGACATCCTC
GCCTTCGCGGCGCGGGACGCCGCCGTGGCTGCGGGCCTCCCCAGCTACGACGTCGCGGCGGGGCGGCGCGACGGCATGCGCTCCAACATGGACGACCTCCCGGGCAACTTCCCCGTGCCG
GGCCACCACGTCCCGCGCCTCACGGAGCTCTTCAGCCAGCGGGGGCTCTCCCAGGAGGACATGGTGGTGCTCTCCGGCGCGCACTCCATCGGCGGCGCCCACTGCTTCATGTTCTCCAAC
CGCATCTACGGCTTCTCCGAGGAGGCCGATGTGGACCCTTCGCTGGACCCGGAGTTCGCGGCGCGGCTCCGGCAGGTGTGCCCGCCGCGGAACCCCGACGACGACCCGCAGCAGGCGCCC
AAGGTGAAGTTCGACTCGCAGACGGGGGAGAAGCTCGACAGCGCCTACTACTCGGAGCTGCTCGCCAGGCGCGGCCTGCTGACCTCGGACAACGCGCTCATCGAGGACCCGCAGACGAGG
GCGATGGTGGAGGCCTTCGCCGGGGACGACGCCATGTGGCAGCAGAAATTTGCGGAGGCGATGCAGAGGGTCGGCATGCTCGACGTGCTCATCGGCGAGGGCAAGGGCCAGGTGAGGAAG
CAGTGCCGCCTGGTGAACGGGCAGGAGCAGCAGCAGCAGCCGCAGCTTCCCTGGTTCCGGCACCAGCAGCGGCTGCCGTGGTCCCGTCAGCGGCGGCCGCGTCGACCGTTCCCGCACCAC
CCGGTGGCCGATCTGATCAACGGGTTCTTCCGCGGGTTCCAC

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTGTCGCTGTTCCTTTTCGCCCTGCTCGCGTCGGCGGCCCAGCGGAGCCTGCAGGTGGGGTTCTATGGCCAGTCGTGCCCAGAGGCCGAGGCAACCATCAGCGACATCGTCAACAAC
GAGATCGCCATGGACCGCGGCATCTCCCCCGGCCTCATCCGGCTATTCTTCCACGATTGCTTCATCACGGGCTGCGACGCTTCCATCCTCCTGGACGAGTCGCCGGCAGGCGACGTCCCG
GAGAAGGAGTCGTCGGCCAACGGGTTCACCCTCGTCGGCCTCCGGACCATCGACATCGCCAAGTCGACCCTCGAGTCCATGTGCCCGCGCACGGTCTCCTGCGCGGACATCCTCGCCTTC
GCGGCGCGGGACGCCGCCGTGGCTGCGGGCCTCCCCAGCTACGACGTCGCGGCGGGGCGGCGCGACGGCATGCGCTCCAACATGGACGACCTCCCGGGCAACTTCCCCGTGCCGGGCCAC
CACGTCCCGCGCCTCACGGAGCTCTTCAGCCAGCGGGGGCTCTCCCAGGAGGACATGGTGGTGCTCTCCGGCGCGCACTCCATCGGCGGCGCCCACTGCTTCATGTTCTCCAACCGCATC
TACGGCTTCTCCGAGGAGGCCGATGTGGACCCTTCGCTGGACCCGGAGTTCGCGGCGCGGCTCCGGCAGGTGTGCCCGCCGCGGAACCCCGACGACGACCCGCAGCAGGCGCCCAAGGTG
AAGTTCGACTCGCAGACGGGGGAGAAGCTCGACAGCGCCTACTACTCGGAGCTGCTCGCCAGGCGCGGCCTGCTGACCTCGGACAACGCGCTCATCGAGGACCCGCAGACGAGGGCGATG
GTGGAGGCCTTCGCCGGGGACGACGCCATGTGGCAGCAGAAATTTGCGGAGGCGATGCAGAGGGTCGGCATGCTCGACGTGCTCATCGGCGAGGGCAAGGGCCAGGTGAGGAAGCAGTGC
CGCCTGGTGAACGGGCAGGAGCAGCAGCAGCAGCCGCAGCTTCCCTGGTTCCGGCACCAGCAGCGGCTGCCGTGGTCCCGTCAGCGGCGGCCGCGTCGACCGTTCCCGCACCACCCGGTG
GCCGATCTGATCAACGGGTTCTTCCGCGGGTTCCAC

Retrieve as FASTA