Entry information : PbreLiP04 (LiP4)
Entry ID 9631
Creation 2011-10-24 (Christophe Dunand)
Last sequence changes 2011-10-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-28 (Catherine Mathe (Scipio))
Peroxidase information: PbreLiP04 (LiP4)
Name (synonym) PbreLiP04 (LiP4)
Class Lignin peroxidase    [Orthogroup: LiP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phlebia
Organism Phlebia brevispora    [TaxId: 194682 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PbreLiP04
start..stop
S start..stop
PbreLiP03 582 0 1..362 1..362
PrLiP01 573 0 1..370 1..370
BaLiP04 501 1.18e-179 1..362 1..362
TvLiP09 482 4.81e-172 1..362 1..361
Gene structure Fichier Exons


exon

Literature and cross-references PbreLiP04 (LiP4)
DNA ref. JGI genome:   scaffold_14 (747351..749059)
Protein sequence: PbreLiP04 (LiP4)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   370 (349)
PWM (Da):   %s   39223.44 (37002.2)  
PI (pH):   %s   4.26 (4.22) Peptide Signal:   %s   cut: 22 range:22-370
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSFKQLLVCITTALVIGFANAALTRRVACPDGVNTATNAACCGLF
AVRDDLNENLFNGGQCNDEAREALRLTFHDPIAISPALEAQGQF
GGGGADGSIVIFADTETGFPANIGLDEVIEIQKPFLQRSNMSVADFIQFAGAAAVSNCPGAPALPVFGRQDATQPAPDGLVPEPFDLIDDVLARFADAGG
FDELETVWFLI
AHTVAAQGDVGPTIPRTPFDSTPELFDGQFFIETQLRGTTFPGKSGIQGTVMSPLKGEFRLQTDHLARDSRTACEWQSFGTDQAKLQNRFQFIFGAMGQLGHDPDGLID
CSEVLPNPPPLTTTPHFPAGKTNKDVEQ
CAETPFPTLRTNPGPQTAVAPVPSSPVRNA

Retrieve as FASTA  
Remarks Complete sequence from genomic (11 introns).
DNA
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CDS
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