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Entry information : CsuLiP01(LiP1)
Entry ID 9652
Creation 2011-11-04 (Christophe Dunand)
Last sequence changes 2011-11-04 (Christophe Dunand)
Sequence status complete
Reviewer Catherine
Last annotation changes 2019-05-10 (Catherine )
Peroxidase information: CsuLiP01(LiP1)
Name CsuLiP01(LiP1)
Class Lignin peroxidase    [Orthogroup: LiP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Coriolaceae Ceriporiopsis
Organism Ceriporiopsis subvermispora    [TaxId: 42742 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsuLiP01
start..stop		 S start..stop
GsppCIIBB07 521 0 1..364 1..365
PoVP04_PC15 502 5.82e-180 1..364 1..357
CsuLiP02 497 4.57e-178 1..364 1..364
TvCIIBB02 496 1.06e-177 1..364 1..365
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9652' 'complement(join(496211..496223,496279..496343,496398..496472,496525..496622,496681..496726,496779..496848,496899..497024,497078..497156,497214..497255,497311..497322,497375..497442,497502..497568,497623..497690,497741..497945,498010..498070))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 498010..498070 59 N° 2 497741..497945 203 N° 3 497623..497690 66 N° 4 497502..497568 65
N° 5 497375..497442 66 N° 6 497311..497322 10 N° 7 497214..497255 40 N° 8 497078..497156 77
N° 9 496899..497024 124 N° 10 496779..496848 68 N° 11 496681..496726 44 N° 12 496525..496622 96
N° 13 496398..496472 73 N° 14 496279..496343 63 N° 15 496211..496223 11  
complement(join(496211..496223,496279..496343,496398..496472,496525..496622,4966 81..496726,496779..496848,496899..497024,497078..497156,497214..497255,497311..4 97322,497375..497442,497502..497568,497623..497690,497741..497945,498010..498070 ))


exon

Literature and cross-references CsuLiP01(LiP1)
DNA ref. JGI genome:   scaffold_20 (498070..496211)
Cluster/Prediction ref. JGI gene:   99382
Protein sequence: CsuLiP01(LiP1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   364 (343)
PWM (Da):   %s   38132.71 (35832.4)  
PI (pH):   %s   3.89 (3.85) Peptide Signal:   %s   cut: 22 range:22-364
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVFQVLASFITVLAVLQVNRAAVTKRVTCPDGSMTANEACCVLFP
VLEDIQQNLFDGGLCGEEAHESLRLTFHDAFGFSPALQAQGQFGGGGADGSVIVFEETEANFAANGIDEIINAQKPFIARHNITPGDFVQFAGAVGAANCPGAPQLQFMGRPMPVASSPDGLIPEPFDTVDSIIERFADAGNF
TETEIIWLLTAHSIAAADEVDPTIPGTPFDSTPGIFDSQIFIEVQLRGTSFPGTGGNQGEVESPLRGELRLQSDSLARDSRTACEWQAFVDNVPRMQTLFSAAMSTLAVIGQDTSQMVDC
SDIPVPPPPQGTAHIPAGLSNADIEQACATAAFPSLPVDPGPATSVAPVPPA

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTTTCCAGGTCCTTGCGTCCTTCATCACCGTACTTGCCGTTCTCCAAGTCAACAGAGGTCCGTCTACGTTATCCTTTACCATCTATCATCCACGGAAATCCACTCACGTCCCTGAT
CACAGCTCTGCCGTCACCAAGCGCGTAACATGCCCCGACGGCAGCATGACCGCGAATGAGGCTTGTTGTGTGCTTTTCCCTGTCCTAGAGGACATTCAGCAGAACCTCTTCGACGGCGGT
CTGTGCGGCGAGGAAGCACATGAGTCCCTCCGACTCACGTTCCACGACGCTTTTGGCTTCTCGCCAGCCCTCCAGGCTCAGGGACAATTTGGGTACGTGCACTCATTCCGCTAGTGATTA
TACATCTCTGATCGAGTATCAGTGTGGCGGAGGTGCAGATGGCTCCGTCATCGTCTTCGAAGAAACAGAGGCAAACTTCGCCGCCAATATCGGTGTGTTCACATAGGTCCTCAGCTGGAA
AATCCTGGTTAATCCTCGTCCTGTAGGCGCATCGACGAGATCATAAACGCCCAGAAGCCCTTCATTGCCAGACACAACATCACCCCTGGTGACTTGTAAGTCTGTACATGCATGTTCTTG
GACTAGTGCTCACGCATACGCTATCGTGTCATAGCGCGTCCAATTTGCCGGGGCTGTCGGCGCCGCCAATTGTCCGGGAGCTCCCCAACTGCAATTCATGCTTGGTAAGCTCTGCTGCGA
GTCTTTGGATTAGACGTTGATTCAATGCTCTTGTAGGCGCCGCCCGATGCGTAAGTCTCGGCATGCTATACGAATCAAATACTATCTGACTGGATTTCACCCCAGCTCTGTCGCTTCATC
CCCCGATGGTCTTATTCCCGAGCCCTTCGGTACGGTGTAATGTATGAACTAGATGACTGCCGTTGCTGAGCATTCCAAACTTTTAGACACACTGTCGATTCGATCATTGAGCGCTTCGCT
GATGCTGGCAATTTCACTGAAACAGAAATTATTTGGCTGCTCACAGCGTGAGTAGAGTTTTATTCCAGTGAACCGAAAGGTATAACCCAAGTTGCATTAGCCCCACTCGATCGCGGCTGC
CGACGAGGTCGATCCTACCATCCCGGGGACACCGTTCGACTCTACACCAGGCATTTTCGACAGTCAAATCTTCATCGAGGTTCAGCTGAGAGGCACCAGCTTCCCAGGGTCAGTTGTCAA
CATTGTGTACACTAAATGTATCTGACATCCGTCCGCAGAAAACTGGCGGGAACCAGGGCGAGGTTGAATCTCCGCTCAGGGGAGAACTGCGCCTGCAATCCGACTCTGAGGTTTGTGTCG
TATACCTGTCATCATCTGCAACTGGCTGACGGGGCCTCACAGCTCTCGCTCGTGACTCGCGTACTGCCTGCGAGTGGCAGGCGTTTGTCGGTGGGCATCATTAACACGCATCTCACATAT
TAGAAGGCTCATGGTTTCTCCAAAACAGATATAACGTGCCGAGGATGCAGACTTTGTTTAGTGCTGCTATGTCGACGCTCGCCGTGATTGGACAGGACACCTCCCAGATGGTCGACTGTT
CCGATGTGGTCCGTGCTGCTTGCTTCGAATACTATGCATGTGCATGATGCTTGTCCGCAGATATCCCGGTCCCACCCCCGCCTCAGGGAACCGCTCACATCCCTGCTGGCCTGAGCAACG
CTGACATAGAGCAGGCTGTGCGTCATTTCTCTTTCGTTTCGTGAAAGCCATGTGCTCATTGCACTACCCAGTGTGCGCTACTGCTGCGTTCCCGAGTCTCCCGGTTGACCCCGGTCCGGC
TACTTCTGTTGCCCCCGTGTAAGTGTGACCACAATGTGGAGTGCGCATAATGCTAATCGGATTCGTGTCGCAGTCTCCGCCAGCTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTTTTCCAGGTCCTTGCGTCCTTCATCACCGTACTTGCCGTTCTCCAAGTCAACAGAGCTGCCGTCACCAAGCGCGTAACATGCCCCGACGGCAGCATGACCGCGAATGAGGCTTGT
TGTGTGCTTTTCCCTGTCCTAGAGGACATTCAGCAGAACCTCTTCGACGGCGGTCTGTGCGGCGAGGAAGCACATGAGTCCCTCCGACTCACGTTCCACGACGCTTTTGGCTTCTCGCCA
GCCCTCCAGGCTCAGGGACAATTTGGTGGCGGAGGTGCAGATGGCTCCGTCATCGTCTTCGAAGAAACAGAGGCAAACTTCGCCGCCAATATCGGCATCGACGAGATCATAAACGCCCAG
AAGCCCTTCATTGCCAGACACAACATCACCCCTGGTGACTTCGTCCAATTTGCCGGGGCTGTCGGCGCCGCCAATTGTCCGGGAGCTCCCCAACTGCAATTCATGCTTGGCCGCCCGATG
CCTGTCGCTTCATCCCCCGATGGTCTTATTCCCGAGCCCTTCGACACTGTCGATTCGATCATTGAGCGCTTCGCTGATGCTGGCAATTTCACTGAAACAGAAATTATTTGGCTGCTCACA
GCCCACTCGATCGCGGCTGCCGACGAGGTCGATCCTACCATCCCGGGGACACCGTTCGACTCTACACCAGGCATTTTCGACAGTCAAATCTTCATCGAGGTTCAGCTGAGAGGCACCAGC
TTCCCAGGAACTGGCGGGAACCAGGGCGAGGTTGAATCTCCGCTCAGGGGAGAACTGCGCCTGCAATCCGACTCTGAGCTCGCTCGTGACTCGCGTACTGCCTGCGAGTGGCAGGCGTTT
GTCGATAACGTGCCGAGGATGCAGACTTTGTTTAGTGCTGCTATGTCGACGCTCGCCGTGATTGGACAGGACACCTCCCAGATGGTCGACTGTTCCGATGTGATCCCGGTCCCACCCCCG
CCTCAGGGAACCGCTCACATCCCTGCTGGCCTGAGCAACGCTGACATAGAGCAGGCTTGCGCTACTGCTGCGTTCCCGAGTCTCCCGGTTGACCCCGGTCCGGCTACTTCTGTTGCCCCC
GTTCCGCCAGCTTGA

Retrieve as FASTA