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Entry information : PbreLiP05 (LiP5)
Entry ID 9702
Creation 2011-11-01 (Christophe Dunand)
Last sequence changes 2016-06-07 (Catherine Mathe)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2016-06-07 (Catherine Mathe)
Peroxidase information: PbreLiP05 (LiP5)
Name (synonym) PbreLiP05 (LiP5)
Class Lignin peroxidase    [Orthogroup: LiP005]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phlebia
Organism Phlebia brevispora    [TaxId: 194682 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PbreLiP05
start..stop		 S start..stop
PbreLiP01 589 0 16..359 23..363
PrLiP04 501 1.56e-179 23..359 22..358
PrLiP03 483 1.21e-172 26..359 25..358
PbreLiP03 468 1.71e-166 28..360 29..363
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2046..2305 258 N° 2 2356..2490 133 N° 3 2541..2608 66 N° 4 2666..2677 10
N° 5 2726..2767 40 N° 6 2818..2896 77 N° 7 2948..3073 124 N° 8 3127..3196 68
N° 9 3255..3300 44 N° 10 3365..3537 171 N° 11 3595..3663 67  
join(2046..2305,2356..2490,2541..2608,2666..2677,2726..2767,2818..2896,2948..307 3,3127..3196,3255..3300,3365..3537,3595..3663)


exon

Literature and cross-references PbreLiP05 (LiP5)
DNA ref. JGI genome:   scaffold_34 (2046..3663)
Protein sequence: PbreLiP05 (LiP5)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   359 (334)
PWM (Da):   %s   38425.08 (35610.5)  
PI (pH):   %s   4.28 (4.08) Peptide Signal:   %s   cut: 26 range:26-359
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSHICRLRVLTLVLPAGVVKRNTAATCANGETVVNAECCALFRVREDLQNNLFRNECGDEAHEAIRLTFHDAIAFSPALEAEGKFGGGGADGSIAIFPQVETNFQANVGLDEVVEGQRV
FLERSGMGVADFIQFAGAVALTNCPGAPVMNASIGRVDATRPAPDGLVPEPFDDVDKILNRFADAGDFDELETVWFLIAHSVASQKDIDPSIPRTPFDSTPAIMDGQFFIETQLKGLGFP
GDGPNDGEVLSPLAGEFRLQSDFLLARDNRTACEWQSFGTDQAKLQNRFQFIFQAMGQLGQNVSNLIDCSDVLAIPPPLTTTPHLPAGKTLKDVQPACADTPFPSLTADPGPATRVATV*

Retrieve as FASTA  
Remarks Complete sequence from genomic (10 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTTCACATATCTGCCGTCTACGAGTTCTAACGCTCGTCCTACCAGCCGGCGTCGTTAAGCGTAACACAGCTGCAACATGCGCTAATGGCGAAACCGTCGTGAACGCTGAGTGTTGT
GCTCTCTTCCGCGTTCGTGAGGACCTCCAGAACAACCTCTTTCGCAATGAATGTGGCGATGAGGCCCACGAGGCGATCCGTTTGACATTCCACGATGCTATTGCCTTCTCTCCTGCTCTC
GAAGCTGAGGGCAAATTTGGGGGTTGGTTCCTCCAATTTCTCACTGAGTATTTTATTAATGGACAATGACAGTGGCGGCGGTGCTGATGGCTCGATCGCTATCTTTCCCCAAGTCGAGAC
CAATTTTCAGGCGAATGTCGGTCTCGACGAGGTCGTCGAAGGGCAGCGTGTATTCCTGGAGAGGAGTGGTATGGGTGTCGCCGACTTTTGTATGTACGAGTCATGGCTAGCATCGTGCCG
TCTAACTTTTTCTTCGTAGTATTCAGTTTGCTGGTGCGGTTGCTCTGACCAACTGCCCCGGTGCTCCTGTCATGAACGCGTCCATCGCGGTGAGCCCTCTAATAATCTAGAACAACGGCG
ATACGACTAACATACGATTCGTTCAGGACGCGTGGATGTGGTATGTGGTCTTCGAAATGTGTTTGCATTGTTCAACCATCGTTTTTAGCTACCCGTCCGGCTCCCGATGGACTGGTCCCT
GAGCCGTTCGCGGTAAGAGATACCATATGACCCTCTCGGTGCTGTCATTAACGGTGGTGCAGACGACGTTGACAAGATCCTTAATCGCTTCGCCGATGCAGGAGACTTCGATGAGCTTGA
GACTGTCTGGTTCCTGATCGCGCGTCAGCATTAGCATTTAGTTTGCACCCGTTAATAGCTGACTTCCTCAACAGCCACTCCGTCGCTTCTCAGAAAGACATTGACCCGTCTATCCCACGC
ACCCCGTTCGACTCAACTCCGGCGATTATGGACGGCCAATTCTTCATCGAGACCCAACTGAAAGGTCTTGGCTTCCCGGGGGGTACGTTATATATGCGGCCCTGGTGTAACGATCCACCA
ATCAGAATCCAACAGTGACGGCCCTAACGACGGAGAGGTTCTCTCTCCGCTGGCGGGAGAGTTCCGCCTGCAGTCTGACTTCTTGTGGTATGTAATCACATCTATGTCACAAAGAGGCGG
CGATAACCATACGCATGCCGGCCAGCTTGCGCGCGACAACAGGACCGCCTGTGAATGGCAATCTTTTGGAAAAGTGAGTAATATCCCGGATGTTTGCTGTCGTCTTGAACTGAAACTCAA
CCACAACATGTCTGCAGCGGACCAGGCCAAGCTTCAGAACCGCTTCCAGTTCATTTTCCAGGCAATGGGTCAGCTCGGTCAGAACGTCTCCAATTTGATCGATTGCAGCGACGTCCTGGC
CATCCCGCCGCCTTTGACCACTACCCCTCACCTCCCGGCGGGGAAGACCCTGAAAGATGTCCAGCCCGCTCTGTGCGTATTTTCTTGTTTAATCCTCGTGGTGCCAGCAGTTCAATGACA
TTGTCCCAGTGCGCTGATACCCCCTTCCCTTCTCTCACTGCGGATCCCGGCCCCGCCACCAGGGTTGCTACCGTGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCTTCACATATCTGCCGTCTACGAGTTCTAACGCTCGTCCTACCAGCCGGCGTCGTTAAGCGTAACACAGCTGCAACATGCGCTAATGGCGAAACCGTCGTGAACGCTGAGTGTTGT
GCTCTCTTCCGCGTTCGTGAGGACCTCCAGAACAACCTCTTTCGCAATGAATGTGGCGATGAGGCCCACGAGGCGATCCGTTTGACATTCCACGATGCTATTGCCTTCTCTCCTGCTCTC
GAAGCTGAGGGCAAATTTGGTGGCGGCGGTGCTGATGGCTCGATCGCTATCTTTCCCCAAGTCGAGACCAATTTTCAGGCGAATGTCGGTCTCGACGAGGTCGTCGAAGGGCAGCGTGTA
TTCCTGGAGAGGAGTGGTATGGGTGTCGCCGACTTTATTCAGTTTGCTGGTGCGGTTGCTCTGACCAACTGCCCCGGTGCTCCTGTCATGAACGCGTCCATCGGACGCGTGGATGCTACC
CGTCCGGCTCCCGATGGACTGGTCCCTGAGCCGTTCGACGACGTTGACAAGATCCTTAATCGCTTCGCCGATGCAGGAGACTTCGATGAGCTTGAGACTGTCTGGTTCCTGATCGCCCAC
TCCGTCGCTTCTCAGAAAGACATTGACCCGTCTATCCCACGCACCCCGTTCGACTCAACTCCGGCGATTATGGACGGCCAATTCTTCATCGAGACCCAACTGAAAGGTCTTGGCTTCCCG
GGTGACGGCCCTAACGACGGAGAGGTTCTCTCTCCGCTGGCGGGAGAGTTCCGCCTGCAGTCTGACTTCTTGCTTGCGCGCGACAACAGGACCGCCTGTGAATGGCAATCTTTTGGAACG
GACCAGGCCAAGCTTCAGAACCGCTTCCAGTTCATTTTCCAGGCAATGGGTCAGCTCGGTCAGAACGTCTCCAATTTGATCGATTGCAGCGACGTCCTGGCCATCCCGCCGCCTTTGACC
ACTACCCCTCACCTCCCGGCGGGGAAGACCCTGAAAGATGTCCAGCCCGCTTGCGCTGATACCCCCTTCCCTTCTCTCACTGCGGATCCCGGCCCCGCCACCAGGGTTGCTACCGTGTAA

Retrieve as FASTA