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Entry information : BaLiP01
Entry ID 9721
Creation 2011-11-17 (Christophe Dunand)
Last sequence changes 2011-11-17 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-01 (Catherine Mathe)
Peroxidase information: BaLiP01
Name BaLiP01
Class Lignin peroxidase    [Orthogroup: LiP003]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Meruliaceae Bjerkandera
Organism Bjerkandera adusta    [TaxId: 5331 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BaLiP01
start..stop		 S start..stop
BaLiP04 562 0 1..369 1..362
BaLiP09 559 0 1..369 1..364
BaLiP03 557 0 1..369 1..362
BaLiP12 555 0 1..369 1..362
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9721' 'complement(join(151860..151928,151984..152293,152348..152473,152527..152605,152661..152714,152769..152836,152896..153030,153085..153141,153194..153344,153397..153457))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 153397..153457 59 N° 2 153194..153344 149 N° 3 153085..153141 55 N° 4 152896..153030 133
N° 5 152769..152836 66 N° 6 152661..152714 52 N° 7 152527..152605 77 N° 8 152348..152473 124
N° 9 151984..152293 308 N° 10 151860..151928 67  
complement(join(151860..151928,151984..152293,152348..152473,152527..152605,1526 61..152714,152769..152836,152896..153030,153085..153141,153194..153344,153397..1 53457))


exon

Literature and cross-references BaLiP01
DNA ref. JGI genome:   scaffold_37 (153457..151860)
Protein sequence: BaLiP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   369 (348)
PWM (Da):   %s   38841.97 (36710.8)  
PI (pH):   %s   4.08 (4.04) Peptide Signal:   %s   cut: 22 range:22-369
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFKQLLAALSVAIFLGTAQGAITRRVACPDGVNTATNAACCALF
AVRDDIQANMFDGGQCNDVAHQSLRLTFHDAVAFSPALTAQGQFGGNGADGSIITFGDIETAFHPNIGLDEIVAIQKPFIAKHNMTAGDFLHFAGAIATTNCPGAPTISFLGRPEATQAAPDGLV
PEPFHTVDQILARMNDALEFDELETVWALIAHTTGAANDIDTTIPRTPFDSTPTLFDSQFFIETQLKGTLFPGTGGDNGANTGEVMSALAGEMRLQSDFLIARDARTACEWQSFSGNMPK
LQNRFQFVLETFAVVGQDQTNMIDCSEVIPVPVDLTDEQAAGFFPPGKTLDDVEGCADTPFPSFATAPGPATAIPAV*

Retrieve as FASTA  
Remarks Complete sequence from genomic (9 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCAAGCAACTCCTCGCTGCGCTCTCCGTCGCAATTTTCCTAGGCACCGCCCAGGGTATGCTCTCTACGCCGTACCTCCGACCGCCACCGTGCTGATTGCTTTTCAGGTGTGCG
ATTACCAGGCGTGTTGCCTGCCCCGACGGGGTGAACACTGCGACGAACGCCGCATGCTGCGCCTTGTTCGCCGTTCGCGACGACATCCAGGCCAACATGTTCGACGGCGGCCAGTGCAAC
GACGTTGCCCACCAGTCGCTCCGTTTGTGAGTGCAACGGCCGACGAGCTGCATTCGCCATACTCATACATCGACTCAGGAGACTTTCCACGATGCGGTCGCGTTCTCTCCCGCGCTCACT
GCTCAGGGCCAGTTCGGGTAAGTTTTCCTCCCTGCCACACAAAGCGTCTGCTGATTAGACTTATCATCTAGAGAGGAAACGGTGCTGACGGTTCTATCATCACCTTCGGTGATATCGAGA
CGGCCTTCCACCCCAACATCGGCCTCGACGAAATCGTCGCCATCCAGAAGCCCTTCATCGCGAAGCACAACATGACAGCTGGCGACTTGTAAGTCTCCTGCAGATAGCCTATCATATCTT
CAACTCAGTCATTACTTCGGCGATTAGCCCCTCCACTTCGCTGGTGCGATTGCTACGACCAACTGCCCAGGCGCTCCCACCATCAGCTTCCTCTTGGGTAAATTATCCCCATTACTATCT
TATTATTATTCAACTAATTATTGCATCTCAGGCGCCGTCCCGAGGCTACTCAGGCTGCTCCTGATGGTCTCGTCCCTGAGCCGTTCCGTACGTCTCGCCATTCTTTACAGCTGAACTTCG
CTGACGTCGGCACCAAAACCAGACACACTGTCGACCAGATTCTGGCCCGCATGAACGACGCGCTGGAGTTTGACGAGCTCGAAACCGTTTGGGCTCTCATTGCGTGAGTATAAGTTTCAT
CAGTACAATGCTGCTGTTGACTGACCTCCAAATCAGCCCCACACCACTGGTGCCGCCAACGATATCGACACAACCATCCCGCGCACCCCCTTCGACTCTACGCCGACGCTCTTCGACTCC
CAGTTCTTCATCGAGACCCAGCTCAAGGGCACCTTATTCCCTGGGTAAGCGGGAGCTACTACGTTACAACACGCGTATCGAACTGACATGCGCATTAGCACACTGGTGGAGACAACGGCG
CAAACACGGGCGAAGTCATGTCTGCTCTGGCCGGCGAGATGCGTCTGCAGTCCGACTTCCTCATCGCCCGCGACGCGAGGACAGCCTGCGAGTGGCAATCGTTCTCTGGTAACATGCCCA
AGCTCCAGAACCGATTCCAGTTCGTCCTCGAGACCTTTGCCGTCGTTGGCCAGGACCAGACCAACATGATCGACTGCTCCGAGGTCATCCCCGTCCCCGTTGATCTCACCGACGAGCAGG
CTGCTGGCTTCTTCCCTCCCGGAAAGACCCTCGATGATGTCGAGGGAGCTGTGAGTTATCTTTCGTCCTTTCTCGTGTGCCTCAGACTGATTGCACGTCGTTCAGTGTGCGCCGACACTC
CGTTCCCCTCGTTCGCTACCGCCCCTGGCCCCGCCACTGCTATCCCCGCCGTGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCAAGCAACTCCTCGCTGCGCTCTCCGTCGCAATTTTCCTAGGCACCGCCCAGGGTGCGATTACCAGGCGTGTTGCCTGCCCCGACGGGGTGAACACTGCGACGAACGCCGCA
TGCTGCGCCTTGTTCGCCGTTCGCGACGACATCCAGGCCAACATGTTCGACGGCGGCCAGTGCAACGACGTTGCCCACCAGTCGCTCCGTTTGACTTTCCACGATGCGGTCGCGTTCTCT
CCCGCGCTCACTGCTCAGGGCCAGTTCGGAGGAAACGGTGCTGACGGTTCTATCATCACCTTCGGTGATATCGAGACGGCCTTCCACCCCAACATCGGCCTCGACGAAATCGTCGCCATC
CAGAAGCCCTTCATCGCGAAGCACAACATGACAGCTGGCGACTTCCTCCACTTCGCTGGTGCGATTGCTACGACCAACTGCCCAGGCGCTCCCACCATCAGCTTCCTCTTGGGCCGTCCC
GAGGCTACTCAGGCTGCTCCTGATGGTCTCGTCCCTGAGCCGTTCCACACTGTCGACCAGATTCTGGCCCGCATGAACGACGCGCTGGAGTTTGACGAGCTCGAAACCGTTTGGGCTCTC
ATTGCCCACACCACTGGTGCCGCCAACGATATCGACACAACCATCCCGCGCACCCCCTTCGACTCTACGCCGACGCTCTTCGACTCCCAGTTCTTCATCGAGACCCAGCTCAAGGGCACC
TTATTCCCTGGCACTGGTGGAGACAACGGCGCAAACACGGGCGAAGTCATGTCTGCTCTGGCCGGCGAGATGCGTCTGCAGTCCGACTTCCTCATCGCCCGCGACGCGAGGACAGCCTGC
GAGTGGCAATCGTTCTCTGGTAACATGCCCAAGCTCCAGAACCGATTCCAGTTCGTCCTCGAGACCTTTGCCGTCGTTGGCCAGGACCAGACCAACATGATCGACTGCTCCGAGGTCATC
CCCGTCCCCGTTGATCTCACCGACGAGCAGGCTGCTGGCTTCTTCCCTCCCGGAAAGACCCTCGATGATGTCGAGGGAGCTTGCGCCGACACTCCGTTCCCCTCGTTCGCTACCGCCCCT
GGCCCCGCCACTGCTATCCCCGCCGTGTAA

Retrieve as FASTA