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Entry information : BaCIIBA04
Entry ID 9730
Creation 2011-11-17 (Christophe Dunand)
Last sequence changes 2011-11-17 (Christophe Dunand)
Sequence status complete
Reviewer Nizar Fawal
Last annotation changes 2012-08-31 (Nizar Fawal)
Peroxidase information: BaCIIBA04
Name BaCIIBA04
Class Other class II peroxidase type A    [Orthogroup: CIIBA001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Meruliaceae Bjerkandera
Organism Bjerkandera adusta    [TaxId: 5331 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BaCIIBA04
start..stop		 S start..stop
CuniCIIBA04 566 0 1..362 1..363
CuniCIIBA01 545 0 1..359 1..358
ParcCIIBA04 522 0 20..359 21..361
HanCIIBA 519 0 1..362 1..361
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9730' 'join(332955..333068,333121..333201,333254..333267,333330..333383,333436..333449,333499..333540,333594..333672,333728..333968,334027..334225,334278..334450,334510..334574,334627..334639)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 332955..333068 112 N° 2 333121..333201 79 N° 3 333254..333267 12 N° 4 333330..333383 52
N° 5 333436..333449 12 N° 6 333499..333540 40 N° 7 333594..333672 77 N° 8 333728..333968 239
N° 9 334027..334225 197 N° 10 334278..334450 171 N° 11 334510..334574 63 N° 12 334627..334639 11
join(332955..333068,333121..333201,333254..333267,333330..333383,333436..333449, 333499..333540,333594..333672,333728..333968,334027..334225,334278..334450,33451 0..334574,334627..334639)


exon

Literature and cross-references BaCIIBA04
DNA ref. JGI genome:   scaffold_19 (332955..334639)
Protein sequence: BaCIIBA04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   362 (344)
PWM (Da):   %s   38213.92 (36320.9)  
PI (pH):   %s   4.7 (4.63) Peptide Signal:   %s   cut: 19 range:19-362
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFKNIFVFVALATAVVAAPGSEKRVDCGGGRTASDAVCCKWFTVLDDIQTNLFDGGECGEETHESLRLTFHDAIGFSLSAERAGKFGGGGDGSMMAFAEIETNFHANNGVDDIVEVQRPFALKHGVSFGDFIQFAGAVGVSNCVGGPRLQFKAGRSN
ISRPAPDLTVPEPFDSTDKIFARMGDAGFSPNEVVDLLASHTVAAQDHVDATIGTPFDSTPSTFDSQFFLETLLKGTLFPGNGPNQGEVLSPLHGELRLQSDFEISQDPRTACEWQSFLT
NHDLMVSRFERVMSKLAVLGQNPNRLVDCSEVIPVPKGRVGAAVIPAGKTQADIQGCRATPVPRLSAAPGPETSVAPVPPS

Retrieve as FASTA  
Remarks Complete sequence from genomic (11 introns). Predict of the last intron need to be controled (look for EST).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCAAGAACATCTTCGTTTTCGTCGCTCTCGCCACTGCTGTCGTCGCAGCCCCAGGCTCCGAAAAGCGAGTCGACTGCGGTGGCGGACGCACTGCGAGCGACGCAGTTTTGTAC
GTTTTACTAGAACTTTACCCGCCGTGCAGTACTCACCTCGTGTCGTAGTGTTGCAAATGGTTCACCGTTCTGGACGACATCCAGACCAACCTTTTCGATGGCGGCGAGTGCGGTGAGGAA
ACTCACGAGAGGTAAGCCTACCCTAGATACGTGTTGTATCTTGGCCTGACGTCTCACACACAGTCTCTGCGTCTGACACGTGAGTTGGACACTCGGTTGTCAAGCTCTGACATTTGTTCA
ATCATTTATGGCGATTCCTAGTTTCCACGACGCTATTGGTTTCAGTCTTTCGGCTGAACGTGCTGGCAAATTCGGGGGTATGTGATCGCTACTAAAAAACACGCACATCTGTCTGACTCT
CACTTCCAGCGGCGGAGGAGCAGAGGTAAGCTCGGAGCAGAACCTCCATTAAGTATACGCTCATGATTGTCTAGATGGTTCCATGATGGCTTTCGCCGAAATTGAGACCAACTTCCCCGT
GAGTAGCAAAGCTGATTCTACTCCAAAAGAACGTACTCAATTTGCATACAGATGCCAACAACGGTGTAGACGATATCGTTGAAGTACAGCGTCCCTTTGCGCTCAAGCACGGCGTGTCTT
TCGGCGACTTTTGTGCGTAATGATCCATATTGGTTTCAAGACCATCCGAACTTCATCTCTGTAATAGCATCCAATTCGCGGGCGCTGTCGGTGTTTCCAACTGTGTCGGTGGACCGCGCC
TCCAGTTCAAGGCCGGCCGTTCCAACATCTCGCGCCCTGCTCCCGACCTGACCGTCCCGGAGCCCTTCGACAGTACTGACAAGATCTTCGCCCGCATGGGTGATGCTGGGTTCTCCCCGA
ACGAGGTCGTCGATCTTCTGGCTTCCCACACTGTTGCTGCTCAGGACCATGTCGACGCGACTATTCCCCCGTACGTCAGCGCCTGAATCGTATCGTATCTTTCGCTCTGACCAAGCATCA
TTATACAGGGAACCCCCTTCGACTCGACTCCCAGTACTTTCGATAGCCAGTTCTTCCTCGAGACACTCTTGAAGGGCACCCTCTTCCCCGGCAACGGTCCCAACCAGGGCGAGGTTCTGT
CTCCTCTCCACGGCGAGCTCCGCCTCCAGTCCGACTTCGAGATCTCCCAGGACCCGAGGACCGCCTGCGAGTGGCAATCCTTCCTCACAGTACGATATCTTACCTCGCATCCCGCAACCA
CTAAACTGACGTATGCACTAGCCAACCACGATTTGATGGTCTCCCGCTTCGAGCGTGTCATGTCCAAGCTCGCTGTCCTTGGCCAGAACCCCAATAGGCTTGTTGACTGCTCTGAGGTCA
TTCCCGTCCCCAAGGGCCGTGTCGGTGCTGCCGTCATCCCCGCTGGAAAGACCCAGGCCGATATCCAGGGTGCCCCGTGAGCAGCTCTCTTAGCTTGCCGTGCCATATAATCGACTAATG
CTTCATGAAATCTAGTGCCGTGCCACCCCCGTCCCCCGCCTCTCCGCTGCCCCCGGTCCCGAGACTTCGGTCGCTCCCGTGTGTACGTGTCTGTCCTATCCCACTGTCCCCCCTTGATTC
TGACGAGCTCGCAGCCCCCCGTCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCAAGAACATCTTCGTTTTCGTCGCTCTCGCCACTGCTGTCGTCGCAGCCCCAGGCTCCGAAAAGCGAGTCGACTGCGGTGGCGGACGCACTGCGAGCGACGCAGTTTGTTGC
AAATGGTTCACCGTTCTGGACGACATCCAGACCAACCTTTTCGATGGCGGCGAGTGCGGTGAGGAAACTCACGAGTCTCTGCGTCTGACTTTCCACGACGCTATTGGTTTCAGTCTTTCG
GCTGAACGTGCTGGCAAATTCGGCGGCGGAGGAGCAGATGGTTCCATGATGGCTTTCGCCGAAATTGAGACCAACTTCCATGCCAACAACGGTGTAGACGATATCGTTGAAGTACAGCGT
CCCTTTGCGCTCAAGCACGGCGTGTCTTTCGGCGACTTCATCCAATTCGCGGGCGCTGTCGGTGTTTCCAACTGTGTCGGTGGACCGCGCCTCCAGTTCAAGGCCGGCCGTTCCAACATC
TCGCGCCCTGCTCCCGACCTGACCGTCCCGGAGCCCTTCGACAGTACTGACAAGATCTTCGCCCGCATGGGTGATGCTGGGTTCTCCCCGAACGAGGTCGTCGATCTTCTGGCTTCCCAC
ACTGTTGCTGCTCAGGACCATGTCGACGCGACTATTCCCGGAACCCCCTTCGACTCGACTCCCAGTACTTTCGATAGCCAGTTCTTCCTCGAGACACTCTTGAAGGGCACCCTCTTCCCC
GGCAACGGTCCCAACCAGGGCGAGGTTCTGTCTCCTCTCCACGGCGAGCTCCGCCTCCAGTCCGACTTCGAGATCTCCCAGGACCCGAGGACCGCCTGCGAGTGGCAATCCTTCCTCACC
AACCACGATTTGATGGTCTCCCGCTTCGAGCGTGTCATGTCCAAGCTCGCTGTCCTTGGCCAGAACCCCAATAGGCTTGTTGACTGCTCTGAGGTCATTCCCGTCCCCAAGGGCCGTGTC
GGTGCTGCCGTCATCCCCGCTGGAAAGACCCAGGCCGATATCCAGGGTGCCTGCCGTGCCACCCCCGTCCCCCGCCTCTCCGCTGCCCCCGGTCCCGAGACTTCGGTCGCTCCCGTCCCC
CCGTCTTAA

Retrieve as FASTA