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Entry information : TsPrx21 (Thhalv10016921m)
Entry ID 9787
Creation 2011-11-18 (Qiang Li)
Last sequence changes 2011-11-18 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-28 (Christophe Dunand)
Peroxidase information: TsPrx21 (Thhalv10016921m)
Name (synonym) TsPrx21 (Thhalv10016921m)
Class Class III peroxidase    [Orthogroup: Prx019]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TsPrx21
start..stop		 S start..stop
ThPrx21 685 0 1..328 1..328
BstrPrx19 649 0 4..329 3..328
AlyPrx21 642 0 1..328 1..327
BnPrx21-2_other 637 0 1..328 1..328
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9787' 'complement(join(9066071..9066471,9066617..9066785,9066893..9067081,9067199..9067347,9067564..9067642))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 9067564..9067642 77 N° 2 9067199..9067347 147 N° 3 9066893..9067081 187 N° 4 9066617..9066785 167
N° 5 9066071..9066471 399  
complement(join(9066071..9066471,9066617..9066785,9066893..9067081,9067199..9067 347,9067564..9067642))


exon

Literature and cross-references TsPrx21 (Thhalv10016921m)
Literature Taji,T., Sakurai,T., Mochida,K., Ishiwata,A., Kurotani,A., Totoki,Y., Toyoda,A., Sakaki,Y., Seki,M., Ono,H., Sakata,Y., Tanaka,S. and Shinozaki,K. BMC Plant Biol. 8, 115 (2008).
DNA ref. Phytozome 12:   scaffold_10 (9067642..9066071)
EST ref. GenBank:   BAJ34558
Protein sequence: TsPrx21 (Thhalv10016921m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (299)
PWM (Da):   %s   36725.43 (33398.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.2 (6.71) Peptide Signal:   %s   cut: 30 range:30-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAIAKKPFCLLAFFCLLLQLFSTFHTGNGELEMNYYRESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSTRSFGMRNFKYVKTIKDALEKACP
NTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVLSTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDPTLDPSYALYLKNRCPTPNPDPN
AVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELASDPRTAPFVAKMASDNSYFHEQFSRGVTLLSETNPLTGDQGEIRKDCRYVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns) and 1 EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCATTGCGAAGAAGCCTTTCTGCCTTTTGGCCTTCTTTTGTCTGTTATTACAGTTATTCTCTACCTTCCATACCGGTAAATATTCTTTCCTGATCCAATCACGTTTCGCCACATGT
TTCCATGCCTCTCGAAATTTTGCTGACTGGAGCTGCCTATGTAGTGATATATATTTCTTTTCGTAATTTATTTTCCATCGTAAAAATCCAGGAAATATATTTGTGATAATAATCGCTAAT
AAACGCATATATGTGTAATGGAAACGAATAATTTTAAGAAGTAATAAAACTGTAGGAGAAATGGGGAGCTGGAGATGAATTATTACAGAGAGAGTTGTCCAAAAGCGGAAGAGATAATAA
GACAACAAGTGGAGACTCTTTACTACAAACACGGCAACACCGCCGTTTCTTGGCTCCGTAATCTCTTCCATGACTGTGTCGTCAAGGTAATTTTTTTCTTTCTATTCACATGAGACATGA
GGAATTTAGTTATTATCATCATAATAGAATATCAAAATACGATTTATATCTATGTCAACATGTGTGTGTGTGTGTGTGTGTAGTCTCATGTGATGCGTCGCTGTTGCTAGAGACAGCAAG
AGGTGTGGAATCTGAGCAAAAATCGACGAGGAGTTTTGGGATGAGAAACTTTAAGTATGTTAAGACTATCAAAGACGCACTCGAGAAAGCGTGTCCGAACACAGTGTCTTGTGCCGATAT
TGTCGCTCTCTCTGCTAGAGATGGTATTGTCATGGTGCGTACGTAGACTCCCCATATATTTCTATGCATTTTTACGGCTAATTTGATTAGTTGTATTTTTTTTAATACTAAATTTTTTGT
TGTTGTTTAAATTATAAATAGTTTTGAAAGGGCCAAAAATAGAGATGATAAAGACAGGAAGGAGAGATAGCAGAGGGAGCTACTTGGGAGATGTTGAGACTCTAATTCCTAACCACAATG
ACTCCCTCTCCTCTGTTCTCTCAACTTTCAACTCTATCGGCATCGATGTCGAAGCCACCGTCGCTCTCTTAGGTATCTTTTAATAGCAAAGTAATGACATTATTACTTTATTATACGGAA
ATAAAAAGTTACCATATTACTTTTCTTGGAGAAAATGTACTTTCTTAAAAATAGGAATGATGTTGATTTTGATTGGTCAATTTATATGTAACTGTAGGTGTGCTCACTCAGTGGGTAGGG
TCCACTGCGTTAACCTAGTGCACCGGCTATACCCAACGATCGACCCGACCCTCGACCCAAGTTACGCCCTTTACTTGAAAAATCGTTGCCCAACTCCAAACCCGGATCCGAACGCCGTCT
TGTACTCCCGCAACGACCGTGAGACTCCGATGGTTGTTGACAACATGTATTACAAGAACATCATGGCTCATAAGGGTCTCCTTGTCATCGATGACGAGCTAGCCTCTGATCCTAGGACCG
CTCCTTTTGTGGCTAAGATGGCTTCCGACAATTCTTACTTCCATGAGCAGTTCTCACGCGGTGTCACGCTCTTGTCCGAGACCAACCCGCTCACTGGAGACCAAGGGGAGATCAGGAAGG
ATTGTCGTTATGTGAACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCATTGCGAAGAAGCCTTTCTGCCTTTTGGCCTTCTTTTGTCTGTTATTACAGTTATTCTCTACCTTCCATACCGGAAATGGGGAGCTGGAGATGAATTATTACAGAGAGAGTTGT
CCAAAAGCGGAAGAGATAATAAGACAACAAGTGGAGACTCTTTACTACAAACACGGCAACACCGCCGTTTCTTGGCTCCGTAATCTCTTCCATGACTGTGTCGTCAAGTCATGTGATGCG
TCGCTGTTGCTAGAGACAGCAAGAGGTGTGGAATCTGAGCAAAAATCGACGAGGAGTTTTGGGATGAGAAACTTTAAGTATGTTAAGACTATCAAAGACGCACTCGAGAAAGCGTGTCCG
AACACAGTGTCTTGTGCCGATATTGTCGCTCTCTCTGCTAGAGATGGTATTGTCATGTTGAAAGGGCCAAAAATAGAGATGATAAAGACAGGAAGGAGAGATAGCAGAGGGAGCTACTTG
GGAGATGTTGAGACTCTAATTCCTAACCACAATGACTCCCTCTCCTCTGTTCTCTCAACTTTCAACTCTATCGGCATCGATGTCGAAGCCACCGTCGCTCTCTTAGGTGCTCACTCAGTG
GGTAGGGTCCACTGCGTTAACCTAGTGCACCGGCTATACCCAACGATCGACCCGACCCTCGACCCAAGTTACGCCCTTTACTTGAAAAATCGTTGCCCAACTCCAAACCCGGATCCGAAC
GCCGTCTTGTACTCCCGCAACGACCGTGAGACTCCGATGGTTGTTGACAACATGTATTACAAGAACATCATGGCTCATAAGGGTCTCCTTGTCATCGATGACGAGCTAGCCTCTGATCCT
AGGACCGCTCCTTTTGTGGCTAAGATGGCTTCCGACAATTCTTACTTCCATGAGCAGTTCTCACGCGGTGTCACGCTCTTGTCCGAGACCAACCCGCTCACTGGAGACCAAGGGGAGATC
AGGAAGGATTGTCGTTATGTGAACTAA

Retrieve as FASTA