Entry information : AtPrx17(At2g22420 / PER17 / AtperoxP17 / Atp25a / AtP25)
| Entry ID | 98 |
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| Creation | 2006-02-02 (Filippo Passardi) |
| Last sequence changes | 2015-06-02 (Christophe Dunand) |
| Sequence status | complete |
| Reviewer | Christophe Dunand |
| Last annotation changes | 2020-03-04 (Christophe Dunand) |
Peroxidase information: AtPrx17(At2g22420 / PER17 / AtperoxP17 / Atp25a / AtP25)
| Name | AtPrx17(At2g22420 / PER17 / AtperoxP17 / Atp25a / AtP25) | ||||||||||||||||||||||||||||||||||||
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| Class | Class III peroxidase [Orthogroup: Prx020] | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis | ||||||||||||||||||||||||||||||||||||
| Organism | Arabidopsis thaliana [TaxId: 3702 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
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| Tissue types | Flowers Mixed tissues Siliques Stamen Abscission Zone |
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| Inducer | N/D |
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| Repressor | N/D |
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| Best BLASTp hits |
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| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '98' 'join(9513341..9513544,9513628..9513819,9513891..9514484)' |
Exons►
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Literature and cross-references AtPrx17(At2g22420 / PER17 / AtperoxP17 / Atp25a / AtP25)
| Literature | REFERENCE 1 Cai S, Lashbrook CC. Stamen abscission zone transcriptome profiling reveals new candidates for abscission control: enhanced retention of floral organs in transgenic plants overexpressing Arabidopsis ZINC FINGER PROTEIN2. Plant Physiol. 2008 Mar;146(3):1305-21
REFERENCE 2 Cosio C, Ranocha P, Francoz E, Burlat V, Zheng Y, Perry SE, Ripoll JJ, Yanofsky M, Dunand C. The class III peroxidase PRX17 is a direct target of the MADS-box transcription factor AGAMOUS-LIKE15 (AGL15) and participates in lignified tissue formation. New Phytol. 2017 Jan;213(1):250-263. |
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| Protein ref. | UniProtKB: Q9SJZ2 |
| DNA ref. | Phytozome 12: Chr2 (9513341..9514484) |
| mRNA ref. | GenBank: NM_127806 |
| Cluster/Prediction ref. | Phytozome Gene 12: 19642479 19642479 UniGene: At.24416 |
| Omic ref. | AtProteome: At2g22420 ATTED-II: At2g22420 e-FP Browser: At2g22420 ePlant: At2g22420 Genevestigator: At2g22420 RnR: At2g22420 TAIR: At2g22420 |
Protein sequence: AtPrx17(At2g22420 / PER17 / AtperoxP17 / Atp25a / AtP25)
| Sequence Properties first value : protein second value (mature protein) |
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| Sequence Send to BLAST Send to Peroxiscan |
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| Remarks | Complete sequence from genomic (introns 1 and 2), 5 cDNA and 3 ESTs. | ||||||||||||
| Promoter► Send to BLAST Send to cis Analysis |
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| Terminator +► Send to BLAST Send to cis Analysis |
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| DNA ► Send to BLAST |
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| CDS► Send to BLAST |
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| cDNA► Send to BLAST |
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