Entry information : GmPrx320
Entry ID 9857
Creation 2011-11-29 (Qiang Li)
Last sequence changes 2011-12-02 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-14 (Christophe Dunand)
Peroxidase information: GmPrx320
Name GmPrx320
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx320
start..stop
S start..stop
MtPrx66 573 0 1..320 1..320
LjPrx51 545 0 4..320 5..322
GmPrx79 545 0 5..320 6..321
RcPrx09 535 0 5..320 6..321
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9857' 'join(26988399..26988596,26988885..26989064,26989174..26989336,26989610..26990031)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 26988399..26988596 196 N° 2 26988885..26989064 178 N° 3 26989174..26989336 161 N° 4 26989610..26990031 420
join(26988399..26988596,26988885..26989064,26989174..26989336,26989610..26990031 )


exon

Literature and cross-references GmPrx320
DNA ref. Phytozome 12:   Gm13 (26988399..26990031)
Protein sequence: GmPrx320
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (301)
PWM (Da):   %s   34410.43 (32465.4)  
PI (pH):   %s   6.04 (6.35) Peptide Signal:   %s   cut: 20 range:20-320
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDAILGSLMILVMTSAVQAQLKTGFYSTSCPNAEAIVRSTVVSHF
SKDLSIAPGLLRLHFHDCFVQ
GCDGSILIADSSAEKNALPNIGLRGFEVIDDAKSQIEAICPGIVSCADILALAARDAVDLSDGPSWPVPTGRRDGRISLSSQASNMPSPLDSVSVQRQKFAAKGLDDHDLVTLVGAHTIG
QTECRFFSYRLYNFTTSGSADPTINVAFLAQLQALCPKNGDGLRRVALDKDSPAKFDVSFFKNVRDGNGVLESDQRLWEDSATQSVVQNYAGNVRGFLGLRFDFEFPKAMIKLSSVEVKI
GTDGEIRKVCSKFN

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). No prediction from phytozome.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATGCCATATTGGGTTCCCTAATGATTTTAGTGATGACTTCAGCAGTACAAGCCCAATTGAAAACTGGGTTTTATTCTACTTCATGTCCAAATGCTGAGGCAATAGTACGGTCCACC
GTTGTATCCCACTTCAGCAAGGATCTATCCATTGCTCCTGGCCTGCTCAGGCTTCATTTCCATGATTGCTTTGTCCAG
AGGTAAGCTAATCTCAATCTCAAATCCTTCACTCACGTAAAG
CCGTAAATGTATAAAAGAGGTGTATGAACACATAAAAAATGAGAAACTATACATCAAGATTAAAAGTGACCAACATATATATCTTAGTAACAGACTATGAATTTTTAACATTTGTTCTCT
TAATTTTCTAATTAACAATTATAATTTCACTTCACTTACTTCATAGTCGTCAAGTCAGGTCTTAATTTCTTTTCGTAGAATTTTATTATTTCAGACTCATGAACGTCATTTGACATTTTC
TCCCACAGGGATGCGATGGTTCAATTTTAATTGCAGACTCTTCTGCAGAGAAGAATGCATTGCCAAACATTGGTCTAAGAGGTTTTGAAGTGATCGATGACGCAAAATCACAAATAGAGG
CCATATGTCCTGGAATTGTCTCATGTGCTGACATCCTAGCATTAGCAGCTCGTGATGCTGTCGATTTG
TGGTATTAAGATAAACTCTTTAAACTTCATCAAATACACTCTAGCACTAGCA
CACACACTTGGCCTTTTTGAAGGAATAGATAAAATTAACACTAATGAAAATAATGGCAGAGTGATGGCCCAAGTTGGCCAGTACCCACAGGAAGAAGAGATGGGAGGATTTCTTTATCAT
CTCAAGCCTCAAATATGCCTTCACCACTTGACTCAGTTTCAGTCCAGAGGCAAAAATTTGCGGCGAAAGGTCTAGATGATCATGATCTTGTCACGTTAGTTG
TGGTATGCTTTCTCTCGT
AGTATTTAATGAAAGAAAAATGTTAATAACACACTTTTTTAAATACATATTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNTTGTAATATTTTATGAGTTCTATTCATGATTTCATA
AGAATATGTTAGAAAAAGGAGGTGTTAAGAGAGTGTGTTATTGGTACTCTTATTAATGAAAGTGTGTGAAATATTTATGTTACTAGTATCTGAATACAACAATTTATGTTATGCATGTCT
TATTTATGTGTCTTAAGGTGCACATACTATAGGCCAGACAGAATGCAGGTTCTTCAGCTATCGTCTATACAATTTCACCACCTCTGGTAGTGCTGATCCCACTATAAACGTAGCTTTCTT
AGCTCAACTTCAAGCACTTTGTCCAAAAAATGGAGATGGCTTGAGAAGGGTGGCCTTGGACAAAGATAGCCCAGCCAAATTTGATGTTAGTTTCTTCAAGAATGTACGTGATGGTAATGG
GGTTCTTGAGTCAGACCAGAGGTTGTGGGAAGATTCTGCTACTCAAAGTGTGGTGCAAAATTATGCTGGGAATGTTAGAGGGTTTCTGGGGTTGAGATTTGACTTTGAATTTCCAAAGGC
TATGATTAAGTTAAGCAGTGTAGAGGTGAAGATTGGTACTGATGGAGAGATCAGAAAAGTGTGTTCAAAATTTAATTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATGCCATATTGGGTTCCCTAATGATTTTAGTGATGACTTCAGCAGTACAAGCCCAATTGAAAACTGGGTTTTATTCTACTTCATGTCCAAATGCTGAGGCAATAGTACGGTCCACC
GTTGTATCCCACTTCAGCAAGGATCTATCCATTGCTCCTGGCCTGCTCAGGCTTCATTTCCATGATTGCTTTGTCCAG
GGATGCGATGGTTCAATTTTAATTGCAGACTCTTCTGCAGAG
AAGAATGCATTGCCAAACATTGGTCTAAGAGGTTTTGAAGTGATCGATGACGCAAAATCACAAATAGAGGCCATATGTCCTGGAATTGTCTCATGTGCTGACATCCTAGCATTAGCAGCT
CGTGATGCTGTCGATTTG
AGTGATGGCCCAAGTTGGCCAGTACCCACAGGAAGAAGAGATGGGAGGATTTCTTTATCATCTCAAGCCTCAAATATGCCTTCACCACTTGACTCAGTTTCA
GTCCAGAGGCAAAAATTTGCGGCGAAAGGTCTAGATGATCATGATCTTGTCACGTTAGTTG
GTGCACATACTATAGGCCAGACAGAATGCAGGTTCTTCAGCTATCGTCTATACAATTTC
ACCACCTCTGGTAGTGCTGATCCCACTATAAACGTAGCTTTCTTAGCTCAACTTCAAGCACTTTGTCCAAAAAATGGAGATGGCTTGAGAAGGGTGGCCTTGGACAAAGATAGCCCAGCC
AAATTTGATGTTAGTTTCTTCAAGAATGTACGTGATGGTAATGGGGTTCTTGAGTCAGACCAGAGGTTGTGGGAAGATTCTGCTACTCAAAGTGTGGTGCAAAATTATGCTGGGAATGTT
AGAGGGTTTCTGGGGTTGAGATTTGACTTTGAATTTCCAAAGGCTATGATTAAGTTAAGCAGTGTAGAGGTGAAGATTGGTACTGATGGAGAGATCAGAAAAGTGTGTTCAAAATTTAAT
TGA

Retrieve as FASTA