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Entry information : PcarMnP01
Entry ID 9868
Creation 2011-12-02 (Christophe Dunand)
Last sequence changes 2012-03-29 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-06 (Catherine Mathe (Scipio))
Peroxidase information: PcarMnP01
Name PcarMnP01
Class Manganese peroxidase    [Orthogroup: MnP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete
Organism Phanerochaete carnosa    [TaxId: 231932 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcarMnP01
start..stop		 S start..stop
PcarMnP07 755 0 1..385 1..385
PcarMnP06 664 0 1..383 1..383
PcarMnP05 635 0 1..385 1..385
PbreMnP05 617 0 26..385 23..382
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3181628..3181762 133 N° 2 3181519..3181570 50 N° 3 3181439..3181465 25 N° 4 3181336..3181375 38
N° 5 3181101..3181278 176 N° 6 3180816..3181037 220 N° 7 3180337..3180751 413 N° 8 3180185..3180273 87
complement(join(3180185..3180273,3180337..3180751,3180816..3181037,3181101..3181 278,3181336..3181375,3181439..3181465,3181519..3181570,3181628..3181762))


exon

Literature and cross-references PcarMnP01
DNA ref. JGI genome:   scaffold_5 (3181762..3180185)
Protein sequence: PcarMnP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   385 (365)
PWM (Da):   %s   39936.5 (37740.3)  
PI (pH):   %s   4.03 (3.94) Peptide Signal:   %s   cut: 21 range:21-385
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFKFSSLFALVAVAATVRAAPASTTTTCSDGTQVPDEMCCNFVPLVSALQNTLFMGDCGEDAHEVIRLTFHDAIAISQSQGPAAGGGADGSMLIFPTVEPSFAANTGIGDSVNNLIPFL
SQFPNVTAGDLIQFAGTVALSNCPGAPQLEFLAGRPNATAPAVDGLIPGPQDSVTSILDRFADAGGFSPFEVISLLASHSIARADKVDPTIDAAPFDSTPFVFDTQVFLEVLLKGVGFPG
TPNNTGEVASPLPLTVGSDTGELRLQSDFALARDSRTACFWQGFVNQQELMASSFQAAMSKMTILGHNRADLVDCSAVVPVPKPAVNKPASFPATTGPQDLELSCTTSQFPTLTVDAGSQ
ETEIPHCSDGSMTCNTVQFTGPAVD*

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCAAATTCTCTTCACTTTTCGCCCTCGTCGCCGTTGCTGCGACCGTGCGCGCCGCTCCGGCTTCCACCACCACCACCTGCTCCGATGGCACACAGGTCCCCGACGAAATGTGC
TGCAACTTCGTCCCTGTACGTCTACTTCGTATCACCCTGCGCTACGACGGTGGCTGAATTTCTTGAATGCAGCTCTCGTGTCAGCGCTCCAGAACACGCTATTCATGGGAGACTGTGGTG
AAGACGGTAGGCCGTTTGCCTTCCCGCTTTGTAGCAACAAGGTTGAAATCTCTTCCTAGCTCTCACGAGGTCATCCGTCTTACTTTCCGTGAGTGACATTTGTGTCGAAGCCAGTTACCG
GTTACCAGCATACTTACTATTACCTTGCCAGACACGACGCCATCGCTATCTCTCAGAGCCAGGGTCCCGCAGCGTGAGTGTGACCACGCCTTGATCCGTAGTCTGAAGGTTGTTGACCCC
GAATGTACAGCGCGGAGGAGGAGCCGACGGGTCGATGCTCATCTTCCCGACCGTTGAGCCATCGTTCGCAGCGAACACGGGCATCGGCGACAGTGTCAACAACCTGATTCCGTTCCTGTC
CCAGTTCCCCAACGTCACCGCTGGCGACCTGATCCAGTTCGCAGGCACGGTCGCACTGAGCAACTGCCCGGTAAGCAACCGCAGACTGCCCAGCTCCTGCTGTACTTCGTGCTCACACAA
TCTCCAACAACAGGGGGTGCGCCGCAGCTGGAGTTCCTTGCTGGTCGCCCGAATGCGACTGCGCCGGCCGTTGACGGCTTAATCCCCGGGCCGCAGGATAGCGTCACGTCGATCCTCGAC
CGGTTTGCCGATGCTGGCGGCTTCAGCCCCTTCGAAGTCATCTCCCTCCTTGCCTCTCACTCCATTGCTCGTGCCGACAAGGTTGACCCGACGATCGACGCCGCGCCTTTCGACTCCGTA
ATTATCCGTGCTTCCTCTCCCTTGGGAGTCGGACTCCACTGACAATAATCTACTCGTGCAGACACTCCATTCGTGTTCGACACTCAGGTCTTCCTCGAGGTCCTGCTCAAGGGTGTCGGC
TTCCCTGGCACCCCCAACAACACCGGCGAGGTCGCCTCTCCGCTCCCGCTCACCGTCGGCAGCGACACCGGCGAGCTGCGTCTGCAATCGGACTTTGCGCTGGCGCGCGACTCACGCACG
GCGTGCTTCTGGCAGGGCTTCGTCAACCAGCAGGAGCTCATGGCATCGAGCTTCCAGGCGGCCATGTCCAAGATGACGATCCTCGGCCACAACCGCGCCGATCTCGTTGACTGCTCGGCC
GTCGTCCCTGTGCCGAAGCCCGCGGTCAACAAGCCTGCGAGCTTCCCGGCGACGACTGGCCCTCAGGACCTGGAGCTGTCGTGCACGACCTCGCAATTCCCGACGCTGACCGTCGACGGT
ATGTGTTTTCCAGGTGTGCTCGCTTGCTGTCCAATGAAGCTGACTCTCGACTCTGGTACAGCCCCGGCTCACAGGAGACGGAGATCCCGCACTGCTCGGACGGCAGCATGACGTGCAACA
CTGTCCAGTTCACCGGCCCGGCTGTCGACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCAAATTCTCTTCACTTTTCGCCCTCGTCGCCGTTGCTGCGACCGTGCGCGCCGCTCCGGCTTCCACCACCACCACCTGCTCCGATGGCACACAGGTCCCCGACGAAATGTGC
TGCAACTTCGTCCCTCTCGTGTCAGCGCTCCAGAACACGCTATTCATGGGAGACTGTGGTGAAGACGCTCACGAGGTCATCCGTCTTACTTTCCACGACGCCATCGCTATCTCTCAGAGC
CAGGGTCCCGCAGCCGGAGGAGGAGCCGACGGGTCGATGCTCATCTTCCCGACCGTTGAGCCATCGTTCGCAGCGAACACGGGCATCGGCGACAGTGTCAACAACCTGATTCCGTTCCTG
TCCCAGTTCCCCAACGTCACCGCTGGCGACCTGATCCAGTTCGCAGGCACGGTCGCACTGAGCAACTGCCCGGGTGCGCCGCAGCTGGAGTTCCTTGCTGGTCGCCCGAATGCGACTGCG
CCGGCCGTTGACGGCTTAATCCCCGGGCCGCAGGATAGCGTCACGTCGATCCTCGACCGGTTTGCCGATGCTGGCGGCTTCAGCCCCTTCGAAGTCATCTCCCTCCTTGCCTCTCACTCC
ATTGCTCGTGCCGACAAGGTTGACCCGACGATCGACGCCGCGCCTTTCGACTCCACTCCATTCGTGTTCGACACTCAGGTCTTCCTCGAGGTCCTGCTCAAGGGTGTCGGCTTCCCTGGC
ACCCCCAACAACACCGGCGAGGTCGCCTCTCCGCTCCCGCTCACCGTCGGCAGCGACACCGGCGAGCTGCGTCTGCAATCGGACTTTGCGCTGGCGCGCGACTCACGCACGGCGTGCTTC
TGGCAGGGCTTCGTCAACCAGCAGGAGCTCATGGCATCGAGCTTCCAGGCGGCCATGTCCAAGATGACGATCCTCGGCCACAACCGCGCCGATCTCGTTGACTGCTCGGCCGTCGTCCCT
GTGCCGAAGCCCGCGGTCAACAAGCCTGCGAGCTTCCCGGCGACGACTGGCCCTCAGGACCTGGAGCTGTCGTGCACGACCTCGCAATTCCCGACGCTGACCGTCGACGCCGGCTCACAG
GAGACGGAGATCCCGCACTGCTCGGACGGCAGCATGACGTGCAACACTGTCCAGTTCACCGGCCCGGCTGTCGACTAA

Retrieve as FASTA