Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
481 |
PWM (Da): |
51426.56 |
|
PI (pH): |
6.05 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MTSSTPAPLDLNNVQGDSLIGLPKKTQTYVFFQISDNVKAFRTQLAQLIPLITTAAQVSTHKQQIVQNKKTAAEKGVPPPLLKLSGVNIAFSHSGLVLGITDDIGDTAFDGGMLADAQNL GDQGTTSGSTFTPDWIPAFKNPVHGVILISGDSHITTGATLLEVEKIFAVGTHNATIVEVLRLVGDVRPGKEKGHEHFGFLDGISQPAVQGVDTNPNPGQETVSQGIILLGRDGDTVTRP AWALDGSLVALRYLKQLVPEFDTFLKQNPIPGPPPDLGSELLGARFVGRWKGAPIDLAPTADDPALGADSSRNNNFRYAFPDDPQTQDRCPFAAHTRKTNPRADLEDLSPPISTETRRII RRGIQYGPEVTPLEAAKGQTENNRGLIFVAYQSNIVNGFQFIQHSWANNTGFPIDKPITPGFDPIIGQATDPSSRTLSGTNPNAQSNTLALPTQWVVPQGGEYFISPSIPALKSTFAV |
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic (5 introns). Incorrect prediction from JGI (in the 3'UTR of an oligopeptide transporter). |
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGACTTCCTCCACCCCAGCCCCTCTTGACTTGAACAACGTGCAAGGTGATAGTCTGTGAGTATAGTGTCTGGTTACGTCCCTTGTTGATGTATCTCACAATTTGACCATAGGAGATTGG CCTGCCGAAGAAGACCCAGACATATGTCTTCTTCCAGATCAGCGACAACGTCAAGGCCTTCCGCACGCAGCTTGCACAGCTCATTCCCCTCATCACTACTGCCGCACAGGTCAGCACCCA CAAGCAGCAGATTGTCCAGAACAAGAAGACAGCCGCAGAGAAAGGCGTGCCGCCTCCTCTCCTGAAGCTTTCAGGCGTCAACATTGCCTTCTCCCACAGCGGATTGGTGAAGGTTAGTCG TTCATGTTTGAGCCATTGTATCTCTGTGACTTACTCTTGTTTGATATACCATGTAGTTTTAGGAATTACGGATGATATTGGCGACACCGCTTTCGACGGTGGTATGCTCGCGGACGCGCA GAATCTCGGCGATCAGGGTACCACGTCTGGCAGCACCTTCACTCCAGACTGGATCCCCGCATTCAAGAACCCCGTTCATGGCGTGATTCTTATCTCTGGGGATTCTCATATCACGACTGG TGCCACGTTACTCGAGGTGGAGAAGATATTCGCAGTTGGGACGCACAATGCTACCATTGTTGAGGTCCTGCGCCTTGTCGGAGACGTTCGACCGGGCAAGGAAAAAGGACATGAGCAGTA CGTTCATTGGCGTAGTAACTCGTACCTAGTTCTGACATCGAGTATAGCTCTTCGGTTTCCTCGACGGCATCTCGCAGCCTGCTGTGCAAGGTGTTGACACCAATCCCAACCCTGGTCAGG AGACGGTCAGCCAGGGTATCATCCTCCTTGGACGCGATGGCGATACTGTTACCCGTCCAGCGTGGGCGTTGGACGGCAGCTTGGTTGCACTTCGTTACCTGAAGCAGCTTGTGCCCGAGT TCGACACATTCCTCAAGCAGAACCCCATCCCTGGCCCGCCGCCGGACCTGGGTAGCGAGCTTCTTGGAGCACGCTTCGTTGGACGATGGAAGAGTGGTATGTGTGATGATTTCGACTCCG CAATGTGCAGGGCTAAATGTACGATGTCCATCAGGTGTGCGCCCATTGACCTTGCTCCGACCGCCGATGATCCCGCTCTTGGTGCTGATTCCTCCCGCAACAACAACTTCCGTTATGCCT TCCCCGATGACCCGCAGACCCAAGATCGATGCCCGTTTGCGGCGCACACCCGTAAGACCAACCCCAGGGCCGACCTCGAGGACCTTTCGCCTCCCATCTCCACTGAGACGCGCCGCATCA TCCGTCGTGGGATCCAATACGGACCTGAGGTTACTCCGCTGGAGGCCGCAAAGGGCCAGACGGAGAACAACCGTGGCCTCATCTTCGTCGCCTATCAGAGCAACATTGTGAACGGATTCC AGTTCATCCAGCACAGTACGTCTCTCGCTTGTTTGCGAGATGTTCTTGAGTTTTGACGCCATGTAGGCGCTGGGCGAACAATACTGGCTTCCCCATTGACAAGCCCATAACGCCTGGCTT CGACCCCATCATCGGCCAGGCAACGGACCCCTCGTCGCGCACGCTATCTGGTACGAACCCCAATGCACAGAGCAACACGCTCGCTCTGCCTACGCAGTGGGTCGTGCCTCAGGGTGGAGA ATACTTCATCTCGCCGTCCATCCCTGCTCTCAAGAGTACCTTTGCGGTCTCG |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGACTTCCTCCACCCCAGCCCCTCTTGACTTGAACAACGTGCAAGGTGATAGTCTGATTGGCCTGCCGAAGAAGACCCAGACATATGTCTTCTTCCAGATCAGCGACAACGTCAAGGCC TTCCGCACGCAGCTTGCACAGCTCATTCCCCTCATCACTACTGCCGCACAGGTCAGCACCCACAAGCAGCAGATTGTCCAGAACAAGAAGACAGCCGCAGAGAAAGGCGTGCCGCCTCCT CTCCTGAAGCTTTCAGGCGTCAACATTGCCTTCTCCCACAGCGGATTGGTGAAGTTAGGAATTACGGATGATATTGGCGACACCGCTTTCGACGGTGGTATGCTCGCGGACGCGCAGAAT CTCGGCGATCAGGGTACCACGTCTGGCAGCACCTTCACTCCAGACTGGATCCCCGCATTCAAGAACCCCGTTCATGGCGTGATTCTTATCTCTGGGGATTCTCATATCACGACTGGTGCC ACGTTACTCGAGGTGGAGAAGATATTCGCAGTTGGGACGCACAATGCTACCATTGTTGAGGTCCTGCGCCTTGTCGGAGACGTTCGACCGGGCAAGGAAAAAGGACATGAGCACTTCGGT TTCCTCGACGGCATCTCGCAGCCTGCTGTGCAAGGTGTTGACACCAATCCCAACCCTGGTCAGGAGACGGTCAGCCAGGGTATCATCCTCCTTGGACGCGATGGCGATACTGTTACCCGT CCAGCGTGGGCGTTGGACGGCAGCTTGGTTGCACTTCGTTACCTGAAGCAGCTTGTGCCCGAGTTCGACACATTCCTCAAGCAGAACCCCATCCCTGGCCCGCCGCCGGACCTGGGTAGC GAGCTTCTTGGAGCACGCTTCGTTGGACGATGGAAGAGTGGTGCGCCCATTGACCTTGCTCCGACCGCCGATGATCCCGCTCTTGGTGCTGATTCCTCCCGCAACAACAACTTCCGTTAT GCCTTCCCCGATGACCCGCAGACCCAAGATCGATGCCCGTTTGCGGCGCACACCCGTAAGACCAACCCCAGGGCCGACCTCGAGGACCTTTCGCCTCCCATCTCCACTGAGACGCGCCGC ATCATCCGTCGTGGGATCCAATACGGACCTGAGGTTACTCCGCTGGAGGCCGCAAAGGGCCAGACGGAGAACAACCGTGGCCTCATCTTCGTCGCCTATCAGAGCAACATTGTGAACGGA TTCCAGTTCATCCAGCACAGCTGGGCGAACAATACTGGCTTCCCCATTGACAAGCCCATAACGCCTGGCTTCGACCCCATCATCGGCCAGGCAACGGACCCCTCGTCGCGCACGCTATCT GGTACGAACCCCAATGCACAGAGCAACACGCTCGCTCTGCCTACGCAGTGGGTCGTGCCTCAGGGTGGAGAATACTTCATCTCGCCGTCCATCCCTGCTCTCAAGAGTACCTTTGCGGTC TCG |
Retrieve as FASTA
|
|