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Entry information : PcarMnP02
Entry ID 9924
Creation 2011-12-08 (Christophe Dunand)
Last sequence changes 2011-12-08 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-04-06 (Catherine Mathe (Scipio))
Peroxidase information: PcarMnP02
Name PcarMnP02
Class Manganese peroxidase    [Orthogroup: MnP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete
Organism Phanerochaete carnosa    [TaxId: 231932 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcarMnP02
start..stop		 S start..stop
PsoMnP03 661 0 1..378 1..382
CsuMnP10 651 0 1..378 1..378
CsuMnP05 647 0 1..378 1..377
PsoMnP02 645 0 1..378 1..377
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 495315..495434 118 N° 2 495495..495546 50 N° 3 495603..495669 65 N° 4 495722..495899 176
N° 5 495962..496183 220 N° 6 496238..496652 413 N° 7 496711..496793 81  
join(495315..495434,495495..495546,495603..495669,495722..495899,495962..496183, 496238..496652,496711..496793)


exon

Literature and cross-references PcarMnP02
DNA ref. JGI genome:   scaffold_10 (495315..496793)
Cluster/Prediction ref. JGI gene:   262882
Protein sequence: PcarMnP02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   378 (360)
PWM (Da):   %s   39909.68 (38095.6) Transmb domain:   %s   i34-53o
PI (pH):   %s   4.44 (4.39) Peptide Signal:   %s   cut: 19 range:19-378
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFSSLLALVALVAVTRAAPTAVCSDGTRVSNSACCAFIPLAQDLQETLFMNECGEDAHEAIRLTFHDAVAISRSKGAKAGGGADGSMLLFPTVEPNFSANNGISDSVNNLIPLMQKHDTISAGDLVQFAGAVALSNCGAPRLEFLAGRPNKTIAAIDGL
IPEPQDDVTKILERFDDAGGFTPFEVVSLLASHSVARADKVDSTIDAAPFDSTPFVFDTQVFLEVLLKGVGFPGTNNNTGEVASPLPNTTGTDTGEMRLQSDFALAHDERTACFWQGFVN
QQDFMSNSFQQAMAKLAILGHDRNKLVDCSDVVPVPQPAVKKPATFPATTGPKDLQLTCRAERFPTLTTDNAAQETLIPHCPDGSMNCTTVQFNGPA

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCTCCTCTCTTCTGGCCCTCGTTGCCCTCGTCGCGGTCACTCGCGCAGCCCCGACCGCAGTCTGCTCTGACGGCACTCGCGTCAGCAACTCTGCTTGCTGTGCTTTCATTCCT
CTGTGTGTCATTACTGCATTCTGGCTTCTTATATCTTTGTTCACAGCTTCTATCCTTCATAGCTTGCTCAGGATCTGCAGGAGACCCTTTTCATGAATGAGTGTGGTGAAGATGTGGTTA
GTCTATTTCAAACAGCCTTCATTCCGCCCTACCTAATCATGGCTACTTGCAGCTCACGAGGCCATTCGTCTGACTTTCCACGATGCTGTCGCGATCTCCCGCTCCAAGGGAGCCAAGGCG
CGTAAGTCCTTACTTGGCCTGGCTTTTACCTGTCTGACGTAACGGTCCCACAGCGGAGGAGGCGCCGACGGCTCGATGCTCCTGTTCCCCACCGTCGAGCCTAACTTCTCGGCCAACAAC
GGTATCAGCGACTCTGTCAACAACCTCATTCCTCTCATGCAGAAGCACGACACCATCAGCGCTGGTGACCTCGTCCAGTTCGCTGGTGCCGTTGCCCTTAGTAACTGCCCCCCGTAAGCC
TTACCTACGACATATTCTCCGCCCGCTTGCTCATATTGACATTGAATTTCTGCAGGGCGCGCCGCGTCTCGAATTCTTGGCTGGTCGCCCGAACAAGACCATTGCTGCCATCGATGGCCT
GATCCCTGAGCCTCAGGACGATGTCACCAAGATCCTCGAGCGTTTCGATGATGCTGGAGGCTTCACGCCCTTCGAGGTCGTATCTCTCCTTGCGTCCCACTCTGTCGCCCGCGCGGATAA
GGTCGACTCGACCATTGATGCCGCTCCCTTCGACTCACAGTCAGTGGCTCGTCCAAGTGCTTATGTTTCCACACCTGACCAGCTCTCCTCTAGACGCCGTTTGTCTTTGACACACAGGTC
TTCCTCGAGGTTCTGCTCAAAGGCGTAGGTTTCCCAGGAACGAACAACAACACGGGCGAGGTCGCCTCGCCTCTCCCGAACACCACCGGTACCGACACCGGCGAGATGCGTCTGCAGTCC
GACTTTGCGCTCGCACACGACGAGCGCACGGCGTGCTTCTGGCAGGGCTTCGTCAACCAGCAGGACTTCATGTCGAACAGCTTCCAGCAAGCGATGGCGAAGCTCGCCATCCTTGGCCAC
GATCGCAACAAGCTGGTCGACTGCAGCGACGTCGTCCCCGTGCCGCAACCCGCCGTCAAGAAGCCCGCGACGTTCCCCGCGACGACCGGCCCGAAGGATCTTCAGCTCACGTGCCGCGCC
GAGAGGTTCCCGACCCTCACCACCGACACAGTGCGTGTCTCTTCTTTCATTCGAGGTGCCGAGTGCTGATTGTGTGTTCTTGCTGCAGATGCTGCTCAAGAGACTCTGATTCCTCACTGC
CCCGACGGCAGCATGAACTGCACTACGGTCCAGTTCAATGGCCCGGCATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTTCTCCTCTCTTCTGGCCCTCGTTGCCCTCGTCGCGGTCACTCGCGCAGCCCCGACCGCAGTCTGCTCTGACGGCACTCGCGTCAGCAACTCTGCTTGCTGTGCTTTCATTCCT
CTTGCTCAGGATCTGCAGGAGACCCTTTTCATGAATGAGTGTGGTGAAGATGCTCACGAGGCCATTCGTCTGACTTTCCACGATGCTGTCGCGATCTCCCGCTCCAAGGGAGCCAAGGCC
GGAGGAGGCGCCGACGGCTCGATGCTCCTGTTCCCCACCGTCGAGCCTAACTTCTCGGCCAACAACGGTATCAGCGACTCTGTCAACAACCTCATTCCTCTCATGCAGAAGCACGACACC
ATCAGCGCTGGTGACCTCGTCCAGTTCGCTGGTGCCGTTGCCCTTAGTAACTGCCCCGGCGCGCCGCGTCTCGAATTCTTGGCTGGTCGCCCGAACAAGACCATTGCTGCCATCGATGGC
CTGATCCCTGAGCCTCAGGACGATGTCACCAAGATCCTCGAGCGTTTCGATGATGCTGGAGGCTTCACGCCCTTCGAGGTCGTATCTCTCCTTGCGTCCCACTCTGTCGCCCGCGCGGAT
AAGGTCGACTCGACCATTGATGCCGCTCCCTTCGACTCAACGCCGTTTGTCTTTGACACACAGGTCTTCCTCGAGGTTCTGCTCAAAGGCGTAGGTTTCCCAGGAACGAACAACAACACG
GGCGAGGTCGCCTCGCCTCTCCCGAACACCACCGGTACCGACACCGGCGAGATGCGTCTGCAGTCCGACTTTGCGCTCGCACACGACGAGCGCACGGCGTGCTTCTGGCAGGGCTTCGTC
AACCAGCAGGACTTCATGTCGAACAGCTTCCAGCAAGCGATGGCGAAGCTCGCCATCCTTGGCCACGATCGCAACAAGCTGGTCGACTGCAGCGACGTCGTCCCCGTGCCGCAACCCGCC
GTCAAGAAGCCCGCGACGTTCCCCGCGACGACCGGCCCGAAGGATCTTCAGCTCACGTGCCGCGCCGAGAGGTTCCCGACCCTCACCACCGACAATGCTGCTCAAGAGACTCTGATTCCT
CACTGCCCCGACGGCAGCATGAACTGCACTACGGTCCAGTTCAATGGCCCGGCATAA

Retrieve as FASTA