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Entry information : TvGPx01
Entry ID 9974
Creation 2011-12-14 (Passaia Gisèle)
Last sequence changes 2012-04-06 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-23 (Achraf Jemmat)
Peroxidase information: TvGPx01
Name TvGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Coriolaceae Trametes
Organism Trametes versicolor (Coriolus versicolor )    [TaxId: 5325 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TvGPx01
start..stop		 S start..stop
GsppGPx01 308 2.4e-107 7..230 14..234
DsGPx01 305 3.06e-106 7..230 24..238
ParcGPx01 294 6.36e-103 73..230 5..162
BaGPx01 294 1.96e-102 9..230 3..214
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1322917..1323233 315 N° 2 1322544..1322808 263 N° 3 1322363..1322470 106  
complement(join(1322363..1322470,1322544..1322808,1322917..1323233))


exon

Literature and cross-references TvGPx01
DNA ref. JGI genome:   scaffold_7 (1323233..1322363)
Cluster/Prediction ref. JGI gene:   124939
Protein sequence: TvGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   229 (339)
PWM (Da):   %s   25574.32 (35335.6)  
PI (pH):   %s   10.21 (4.33) Peptide Signal:   %s   cut: 23 range:23-361
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MHRAPAPLAHRYISRATLSPRPSALARPHHYLALSHHLARSSARSPTRLIRSPPHLSRTFSSSKQSAMSDAKSFYELSASLPGGKTYKFEELKGKVVLIVNVASKCGFTPQYKGLQALYD
KHKEKGFVILGFPCNQFGGQEPENDEKIAQFCELNHGVSFPLMAKSDVNGDATNEVYKWLKGQKAGILGLTRIKWNFEKFLIDREGKVVHRWASTTSPEAIDTEVEKLL*

Retrieve as FASTA  
Remarks Conplete sequence from genomic (2 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCATCGCGCCCCCGCCCCCCTGGCTCATCGATATATTTCTCGTGCCACACTTAGTCCGCGCCCGTCCGCTCTCGCACGCCCGCACCACTATCTTGCGCTCTCCCACCACCTCGCACGC
TCATCCGCACGCTCGCCGACGCGTCTTATCCGCTCACCACCACATCTCAGCCGCACCTTCAGCAGCTCTAAGCAATCAGCCATGTCCGACGCAAAGTCCTTCTACGAGCTCTCCGCGTCC
CTCCCGGGCGGGAAGACGTACAAGTTCGAGGAGCTCAAGGGCAAGGTCGTCCTCATCGTCAACGTTGCATCCAAGTGGTACGTCCCCCATCCTTGCCCCCCCCCTCCCAACCTCCTCTTC
CCTCCCTGCCTCTATCCCGCATCCCCGCGTCCCCACATACTAACGCGGTGCGTCTGCCCCTCCAGCGCGGGTTCACGCCGCAGTACAAGGGCCTGCAGGCGCTGTACGACAAGCACAAGG
AGAAGGGCTTCGTCATCCTCGGCTTCCCGTGCAACCAGTTCGGCGGGCAGGAGCCCGAGAACGACGAGAAGATCGCGCAGTTCTGCGAGCTCAACCACGGCGTCTCCTTCCCCCTCATGG
CCAAGTCCGACGTCAACGGCGACGCCACGAACGAGGTCTACAAGTGGCTCAAGGGCCAGAAGGCCGGCATCCTCGGCCTCACCCGCATCAAGGTGCGTTTGTTTCCTGTGTGGTGTTGAG
GGGGCAAGGGGACTGGAACTGGGACTGACGACGGGATGCGTACAGTGTGGAACTTTGAGAAGTTCCTGATCGACCGCGAGGGCAAGGTCGTCCACCGCTGGGCGTCGACGACGTCCCCCG
AGGCGATCGACACCGAGGTCGAGAAGCTCCTCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCATCGCGCCCCCGCCCCCCTGGCTCATCGATATATTTCTCGTGCCACACTTAGTCCGCGCCCGTCCGCTCTCGCACGCCCGCACCACTATCTTGCGCTCTCCCACCACCTCGCACGC
TCATCCGCACGCTCGCCGACGCGTCTTATCCGCTCACCACCACATCTCAGCCGCACCTTCAGCAGCTCTAAGCAATCAGCCATGTCCGACGCAAAGTCCTTCTACGAGCTCTCCGCGTCC
CTCCCGGGCGGGAAGACGTACAAGTTCGAGGAGCTCAAGGGCAAGGTCGTCCTCATCGTCAACGTTGCATCCAAGTGCGGGTTCACGCCGCAGTACAAGGGCCTGCAGGCGCTGTACGAC
AAGCACAAGGAGAAGGGCTTCGTCATCCTCGGCTTCCCGTGCAACCAGTTCGGCGGGCAGGAGCCCGAGAACGACGAGAAGATCGCGCAGTTCTGCGAGCTCAACCACGGCGTCTCCTTC
CCCCTCATGGCCAAGTCCGACGTCAACGGCGACGCCACGAACGAGGTCTACAAGTGGCTCAAGGGCCAGAAGGCCGGCATCCTCGGCCTCACCCGCATCAAGTGGAACTTTGAGAAGTTC
CTGATCGACCGCGAGGGCAAGGTCGTCCACCGCTGGGCGTCGACGACGTCCCCCGAGGCGATCGACACCGAGGTCGAGAAGCTCCTCTGA

Retrieve as FASTA